ggabernet
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ee2e8392ab
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add aws_tower profile
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2021-07-03 12:17:21 +02:00 |
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Harshil Patel
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69f63a006d
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Merge pull request #254 from drpatelh/articv4
Add ARTIC v4 primers to genomes config for viralrecon
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2021-07-01 12:31:02 +01:00 |
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Gisela Gabernet
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aae0f0bf07
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Merge pull request #255 from ggabernet/master
update cfc configs
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2021-07-01 10:59:25 +02:00 |
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ggabernet
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d59d099fe8
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remove load module in cfc configs
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2021-07-01 10:52:54 +02:00 |
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James A. Fellows Yates
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9298b353f5
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Merge pull request #253 from jfy133/eva
eager@EVA fixes more SGE + java silliness
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2021-06-29 12:53:34 +02:00 |
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James A. Fellows Yates
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5f4b915ae8
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Update eva.config
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2021-06-29 11:31:00 +02:00 |
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ameynert
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85c3f07f3c
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Merge pull request #3 from nf-core/master
Merge in from nf-core/configs
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2021-06-25 10:39:18 +01:00 |
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Harshil Patel
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93cfc48afd
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Add ARTIC v4 primers to genomes config
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2021-06-21 21:04:16 +01:00 |
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Edmund Miller
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3019035fdb
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Merge pull request #252 from Emiller88/utd_sysbio
Add UTD sysbio
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2021-06-17 14:36:30 +00:00 |
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Edmund Miller
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cb213a499c
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ci: Another missing comma
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2021-06-17 09:34:03 -05:00 |
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Edmund Miller
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5ad959a436
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fix(sysbio): Missing comma
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2021-06-17 09:18:45 -05:00 |
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Edmund Miller
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f9e4ec4a8d
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fix(sysbio): Add sysbio to rnaseq
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2021-06-17 09:18:45 -05:00 |
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Edmund Miller
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21e1037e0c
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docs(sysbio): Add rnaseq specific docs
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2021-06-17 09:18:45 -05:00 |
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Edmund Miller
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e35c5fd1d8
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fix(sysbio): Add nf-core params
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2021-06-17 08:32:31 -05:00 |
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Edmund Miller
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41ae99d34a
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feat(sysbio): Add cleanup
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2021-06-17 08:17:55 -05:00 |
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Edmund Miller
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87c8e346e0
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fix(sysbio): Change filetype
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2021-06-17 08:14:48 -05:00 |
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Edmund Miller
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14a2106c63
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fix(sysbio): Move rnaseq specific things to pipeline config
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2021-06-17 08:14:48 -05:00 |
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Edmund Miller
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7ff1c6cc7d
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ci: Add sysbio
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2021-06-16 21:19:49 -05:00 |
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Edmund Miller
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2a958f5ce3
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docs: Add sysbio
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2021-06-16 21:19:38 -05:00 |
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Edmund Miller
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472082254a
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fix(sysbio): Add Star resources
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2021-06-16 21:18:48 -05:00 |
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Edmund Miller
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b11f137901
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fix(sysbio): Leave igenomes unfinished
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2021-06-16 21:18:28 -05:00 |
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Edmund Miller
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04d0b27e81
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fix(sysbio): Reduce memory on high processes
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2021-06-16 21:17:40 -05:00 |
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Edmund Miller
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2b58a62a9b
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feat(utd): Add initial sysbio config
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2021-06-11 14:50:58 -05:00 |
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Gisela Gabernet
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9cca0eaf85
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Merge pull request #250 from ggabernet/master
cfc config
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2021-06-11 15:05:16 +02:00 |
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ggabernet
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c3385593cb
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revert cfc config
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2021-06-11 14:59:09 +02:00 |
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Gisela Gabernet
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1f45b9c297
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Merge pull request #249 from nf-core/mseybold-patch-1
Update cfc.config
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2021-06-11 14:42:37 +02:00 |
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mseybold
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f196de8246
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Update cfc.config
singularity is now installed natively on the nodes, so no more need for a module here
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2021-06-10 12:34:58 +02:00 |
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James A. Fellows Yates
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756f067213
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Merge pull request #248 from jfy133/eva
Fix MakeSeqDict eager @ eva
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2021-06-07 13:26:05 +02:00 |
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James A. Fellows Yates
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da8e002969
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Merge pull request #247 from jfy133/shh-fx
Fix eageR@SHH HOPS profile human ref path
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2021-06-07 10:55:01 +02:00 |
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James A. Fellows Yates
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fc8b1162c1
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Fix HOPS huamn ref path
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2021-06-07 10:48:35 +02:00 |
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James A. Fellows Yates
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5bf57894a5
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Merge pull request #246 from jfy133/shh-update
Make eager@SHH big_data go by default to medium via run time
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2021-06-04 12:32:28 +02:00 |
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James A. Fellows Yates
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31d46cb0a9
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Make big_data go by default to medium via run time
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2021-06-04 12:22:54 +02:00 |
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Øyvind Almelid
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c75ceec35d
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Merge pull request #244 from oalmelid/master
eddie.conf: Add TMPDIR and mount for it to singularity configuration + Migrate to BioinformaticsResources for genomes.
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2021-05-25 10:03:05 +01:00 |
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Øyvind Almelid
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f6578f727d
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Add TMPDIR and mount for it to singularity configuration
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2021-05-25 09:54:08 +01:00 |
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Olga Botvinnik
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2ac4693421
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Merge pull request #243 from nf-core/olgabot-patch-1
executor.cli --> aws.batch.cliPath
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2021-05-20 10:34:55 -07:00 |
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Maxime U. Garcia
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483e24aab6
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Merge pull request #242 from maxulysse/master_munin
feat: update owner of munin profile
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2021-05-20 10:08:32 +02:00 |
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MaxUlysse
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05548bdb75
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fix: forgotten }
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2021-05-20 09:37:48 +02:00 |
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Olga Botvinnik
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8166e0f606
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executor.cli --> aws.batch.cliPath
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2021-05-19 13:36:15 -07:00 |
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MaxUlysse
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73fcc4495a
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feat: update owner of profile
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2021-05-19 20:46:52 +02:00 |
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Phil Ewels
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9c4830c8d5
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Merge pull request #238 from nf-core/hebbe-config-fix
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2021-05-19 17:46:52 +02:00 |
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James A. Fellows Yates
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3bcd55966d
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Update eva.config
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2021-05-05 11:39:33 +02:00 |
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James A. Fellows Yates
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f2413553a3
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Merge pull request #240 from jfy133/shh
eager@SHH Add additional retry allowance for silly big data in markdups
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2021-05-05 10:52:58 +02:00 |
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James A. Fellows Yates
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a849fe991c
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Add additional retry allowance for silly big data in markdups
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2021-05-04 21:43:19 +02:00 |
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Maxime U. Garcia
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77bd7f567f
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Merge pull request #228 from asafpr/master
updated jax resources
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2021-05-02 14:47:19 +02:00 |
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Phil Ewels
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76b62b478d
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Fix hebbe withName regex
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2021-04-29 23:06:56 +02:00 |
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Barry digby
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24a4119e43
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memory test
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2021-04-29 14:24:57 +01:00 |
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Barry digby
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aeb0346cce
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.
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2021-04-28 20:14:32 +01:00 |
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Barry digby
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8340e89768
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nuig.config first commit
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2021-04-28 17:28:01 +01:00 |
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Phil Ewels
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fb40b27eab
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Merge pull request #237 from maxulysse/master_opengraph
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2021-04-26 17:23:08 +02:00 |
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MaxUlysse
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867e1aff61
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feat: remove social preview image to use GitHub OpenGraph
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2021-04-26 12:41:56 +02:00 |
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