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Author	SHA1	Message	Date
Alexander Peltzer	c8c150d67c	Add the TravisCI badge as we have tests now	2019-03-08 13:39:25 +01:00
Phil Ewels	a2fa9d3f01	Merge pull request #24 from nf-core/dev ... Include config integration test	2019-03-08 12:36:27 +01:00
Sven Fillinger	ba3d221af6	Corrects regex	2019-03-08 12:23:27 +01:00
Sven Fillinger	bbe0d30462	Fixes syntax error in travis script	2019-03-08 12:00:43 +01:00
Sven Fillinger	d4cd9b1f0a	Corrects profile grep	2019-03-08 11:58:37 +01:00
Sven Fillinger	e401769698	Corrects NXF command line call	2019-03-08 10:54:41 +01:00
Sven Fillinger	7962f7d756	Iterates over profiles and calls Nextflow	2019-03-08 10:52:09 +01:00
Sven Fillinger	1dc523d726	Removes test config	2019-03-08 10:37:27 +01:00
Sven Fillinger	4d43077ddf	Adds simple NXF config script	2019-03-08 10:36:03 +01:00
Alexander Peltzer	a4acbc3a10	Merge pull request #26 from apeltzer/master ... Rolling out iGenomes now	2019-03-07 16:15:26 +01:00
Alexander Peltzer	6b21538062	Rolling out iGenomes now	2019-03-07 16:12:30 +01:00
Sven F	4e1cb46dc5	Update nfcore_custom.config	2019-03-06 20:22:45 +01:00
Sven F	da1b4572d3	Update .travis.yml	2019-03-06 20:11:20 +01:00
Sven F	23c05308de	Merge branch 'master' into dev	2019-03-06 19:54:32 +01:00
Sven F	af81005563	Uses dev branch for now	2019-03-06 19:51:03 +01:00
Harshil Patel	91d1456746	Merge pull request #25 from drpatelh/master ... Added conf folder to paths	2019-03-06 18:43:46 +00:00
drpatelh	53d56310bb	Added conf folder to paths	2019-03-06 18:14:45 +00:00
Sven F	dcc2680ad5	Uses checked out config version	2019-03-06 18:32:14 +01:00
Sven F	5395156d22	Merge pull request #23 from sven1103/master ... Adds profile integration tests	2019-03-06 18:24:48 +01:00
Sven Fillinger	fe9d85b23c	Fixes unresolved var	2019-03-06 18:20:56 +01:00
Sven Fillinger	7ec2532b78	Points config version to current branch	2019-03-06 17:58:43 +01:00
Sven Fillinger	638f986f34	Adds profile integration tests	2019-03-06 17:42:14 +01:00
Harshil Patel	6370484894	Merge pull request #22 from ewels/master ... Hotfix for breaking pipelines that don't already support params.custom_config_base	2019-03-06 16:09:02 +00:00
Phil Ewels	6daf76f47d	Hotfix for breaking pipelines that don't already support params.custom_config_base	2019-03-06 17:03:13 +01:00
Alexander Peltzer	a2f5522396	Merge pull request #19 from apeltzer/make_elvis_great_again ... Provide fix for online issues	2019-03-06 13:16:31 +01:00
Sven F	ad47005fb6	Update nfcore_custom.config ... Co-Authored-By: apeltzer <apeltzer@users.noreply.github.com>	2019-03-06 13:13:52 +01:00
Alexander Peltzer	20deaf3b46	Provide fix for online issues	2019-03-06 12:59:54 +01:00
Alexander Peltzer	8ebcfa26a9	Update nfcore_custom.config ... Fix mini typo	2019-03-06 08:21:34 +01:00
Phil Ewels	c39b4589dd	Merge pull request #17 from ewels/master ... Added support for new params.custom_config_base option	2019-03-05 16:56:13 +01:00
Phil Ewels	d115909343	Tyop	2019-03-05 16:53:59 +01:00
Phil Ewels	e0ba8e6f07	Tweak the readme	2019-03-05 16:28:10 +01:00
Phil Ewels	9fb5715c4c	Added support for new params.custom_config_base option	2019-03-05 16:12:39 +01:00
Alexander Peltzer	6541f77dc4	Merge pull request #16 from phue/mendel-update ... update config for MENDEL cluster	2019-02-28 08:39:40 +01:00
phue	6fc65b54a2	add mendel.md	2019-02-27 22:26:31 +00:00
phue	59887d9bc8	update config for MENDEL cluster	2019-02-27 16:03:26 +00:00
Alexander Peltzer	164ae59568	Update cfc.config ... Please use the newest singularity version 3.0.3!	2019-02-21 10:49:29 +01:00
Alexander Peltzer	d6ea834f40	Update cfc.config	2019-02-21 09:17:28 +01:00
Alexander Peltzer	637ffb782c	Fix CFC config	2019-02-19 17:03:53 +01:00
James A. Fellows Yates	6d9faa1777	Merge pull request #14 from jfy133/master ... Made small SLURM queue change for SHH	2019-01-21 20:33:12 +01:00
James A. Fellows Yates	7a51c684f5	Made small SLURM queue change for SHH	2019-01-21 20:31:37 +01:00
James A. Fellows Yates	13cda2f1d2	Merge pull request #2 from nf-core/master ... Syncing with latest versions	2019-01-21 20:30:45 +01:00
Alexander Peltzer	9962e5b3f2	Merge pull request #13 from drpatelh/master ... Changed description for Singularity image download	2019-01-11 16:04:52 +01:00
drpatelh	24fb466bc0	Changed description for Singularity image download	2019-01-11 14:52:15 +00:00
Harshil Patel	de1c04ec2a	Merge pull request #12 from matq007/munin-config ... Added configuration for Munin	2019-01-11 14:41:10 +00:00
Harshil Patel	789d211b18	Update munin.md	2019-01-11 14:32:35 +00:00
Martin Proks	7acd9cf7df	Updating suggested changes	2019-01-11 15:28:10 +01:00
Martin Proks	89dbb6c061	Setting Singularity as default method	2019-01-11 14:37:12 +01:00
Martin Proks	548c8bca3f	Updated munin doc and configuration	2019-01-10 15:46:16 +01:00
Martin Proks	f259178642	Added munin config boilerplate	2019-01-09 17:27:55 +01:00
James A. Fellows Yates	b9bc420071	Merge pull request #11 from jfy133/SHH_docs ... Added SHH docs and typo fixes	2019-01-07 20:36:53 +01:00