Emelie Nilsso
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d61ed01d2d
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Updated process names according to ampliseq main.nf
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2020-11-25 17:50:30 +01:00 |
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Emelie Nilsso
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37e7cfae2c
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Removed unnecessary code that was used to troubleshoot
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2020-11-24 07:14:23 +01:00 |
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Emelie Nilsso
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cd59bba83e
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Merge branch 'master' of https://github.com/nf-core/configs
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2020-11-24 07:10:05 +01:00 |
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Emelie Nilsso
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c47088cda2
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Merge remote-tracking branch 'origin'
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2020-11-23 21:34:08 +01:00 |
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Emelie Nilsso
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2ea06ffab8
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Modified uppmax and ampliseq specific config to fit with the divided preparation of the database
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2020-11-23 21:20:36 +01:00 |
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James A. Fellows Yates
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f3c7b36e3d
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Merge pull request #189 from nf-core/TCLamnidis-patch-1
Move sdag queue specification block in sdag profile
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2020-11-18 13:16:54 +01:00 |
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Thiseas C. Lamnidis
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71d1ff2226
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Add params block to sdag queue
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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2020-11-18 13:04:46 +01:00 |
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Thiseas C. Lamnidis
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da781907f2
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Move sdag queue specification block in sdag profile
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2020-11-17 19:45:06 +01:00 |
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Harshil Patel
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be9cb33ac1
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Merge pull request #188 from andrewfrank/patch-1
Fix parameters in google.md
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2020-11-12 17:12:41 +00:00 |
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Andrew Frank
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d70fc2605a
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Fix parameters in google.md
Change parameters from hyphens to underscores to accurately reflect google.config
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2020-11-12 11:52:58 -05:00 |
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James A. Fellows Yates
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4dfacc1894
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Merge pull request #13 from nf-core/master
Sync latest changes
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2020-11-10 16:34:16 +01:00 |
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Maxime Borry
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c95fd9d52f
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Merge pull request #186 from jfy133/shh-singularity-runoptions
Remove custom singularity runOptions from SHH config
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2020-11-10 15:39:40 +01:00 |
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James A. Fellows Yates
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9d4d682867
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Update shh.config
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2020-11-10 15:14:03 +01:00 |
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Gisela Gabernet Garriga
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885f0ce5f6
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awsbatch config update
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2020-11-09 22:41:38 +01:00 |
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Maxime Garcia
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3cc3445549
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Merge pull request #183 from abims-sbr/abims
Add ABiMS
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2020-10-23 09:57:20 +02:00 |
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lecorguille
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e3d733d87e
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Add ABiMS - fix lint
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2020-10-23 09:29:54 +02:00 |
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lecorguille
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4d03f72c78
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Add ABiMS - last bits of doc
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2020-10-23 09:27:12 +02:00 |
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lecorguille
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6ee6b7bf56
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Add ABiMS - remove a useless link
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2020-10-23 00:12:02 +02:00 |
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lecorguille
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c974972585
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Add ABiMS - side files
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2020-10-23 00:12:02 +02:00 |
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lecorguille
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23ba1c58b1
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Add ABiMS - NXF_SINGULARITY_CACHEDIR
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2020-10-23 00:11:58 +02:00 |
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lecorguille
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90d1f9072b
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Add ABiMS - autoMounts = false
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2020-10-22 18:18:55 +02:00 |
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lecorguille
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f21d16b24f
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Add ABiMS - fix lint
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2020-10-22 17:47:25 +02:00 |
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lecorguille
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a63ca751ee
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Add ABiMS
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2020-10-22 16:57:41 +02:00 |
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James A. Fellows Yates
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804f53c58c
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Merge pull request #178 from jfy133/master
Add Max Planck Computing and Data Facility Cobra/Raven Clusters
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2020-10-22 13:34:11 +02:00 |
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James A. Fellows Yates
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7088ed196f
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Update mpcdf.md
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2020-10-22 11:08:29 +02:00 |
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James A. Fellows Yates
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3995057d7f
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Update mpcdf.config
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2020-10-22 10:42:46 +02:00 |
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James A. Fellows Yates
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0d6e269322
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Update mpcdf.md
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2020-10-15 14:24:08 +02:00 |
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James A. Fellows Yates
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05deeca2d6
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Update mpcdf.config
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2020-10-15 14:22:35 +02:00 |
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James A. Fellows Yates
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2c2d23ac26
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Merge pull request #181 from nf-core/shh-patch
Update SHH profile to reduce number of parallel jobs
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2020-09-29 14:24:12 +02:00 |
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James A. Fellows Yates
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e26c22b2f1
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Update shh.config
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2020-09-29 14:03:35 +02:00 |
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Johannes Alneberg
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59cd8d69ed
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Merge pull request #180 from MaxUlysse/rackham
Rackham
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2020-09-29 10:31:04 +02:00 |
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MaxUlysse
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2ccbdd3367
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update params to latest version
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2020-09-28 13:59:42 +02:00 |
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MaxUlysse
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8c0cc4b9ec
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code polishing
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2020-09-25 09:57:50 +02:00 |
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MaxUlysse
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81f910cc95
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add specific BamQC config
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2020-09-25 09:49:43 +02:00 |
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MaxUlysse
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fbe7bd133a
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update uppmax specific sarek config
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2020-09-25 08:33:53 +02:00 |
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James A. Fellows Yates
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11f1fb71db
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Update mpcdf.config
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2020-09-16 10:21:58 +02:00 |
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James A. Fellows Yates
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bbbdd3cb0f
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Update mpcdf.config
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2020-09-16 10:21:42 +02:00 |
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James A. Fellows Yates
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5b3492d240
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Update mpcdf.config
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2020-09-16 10:21:26 +02:00 |
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James A. Fellows Yates
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3115963b3e
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Update mpcdf.config
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2020-09-15 19:53:27 +02:00 |
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James A. Fellows Yates
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c6f7573d01
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Update mpcdf.config
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2020-09-15 17:48:54 +02:00 |
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James A. Fellows Yates
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bf87ec24e7
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Update mpcdf.config
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2020-09-15 17:45:38 +02:00 |
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Edmund Miller
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87c757dc47
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Merge pull request #179 from Emiller88/utd
feat: add Kim queue
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2020-09-14 10:28:43 -05:00 |
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Edmund Miller
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2c06019d89
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fix(utd): Add check for less than 12 cpu
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2020-09-13 20:46:14 -05:00 |
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Edmund Miller
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dc2735207e
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feat(utd): add Kim queue
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2020-09-13 20:46:10 -05:00 |
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James A. Fellows Yates
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3b7902d11b
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Mad multi-core increase CPUs on retry
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2020-09-06 08:23:35 +02:00 |
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James A. Fellows Yates
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4335e5deb7
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Update mpcdf.config
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2020-09-04 20:17:09 +02:00 |
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James A. Fellows Yates
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af8d25ed09
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Update main.yml
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2020-09-04 20:14:35 +02:00 |
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James A. Fellows Yates
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4f991d2c0c
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Update eager.config
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2020-09-04 19:59:27 +02:00 |
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James A. Fellows Yates
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b4e275c3b9
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Add MPCDF for EAGER
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2020-09-04 19:57:25 +02:00 |
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James A. Fellows Yates
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5c7ab234b6
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Create mpcdf.config
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2020-09-04 19:55:40 +02:00 |
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