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Commit graph

  • 0acdcc3813 Add Aquila Config Singapore Alexander Peltzer 2019-05-04 23:20:15 +0200
  • 4cad12c918
    Merge pull request #42 from maxibor/master Alexander Peltzer 2019-04-25 17:14:28 +0200
  • de1b2aa7d2 remove autoformat added space maxibor 2019-04-25 15:50:48 +0200
  • efd831a8a3 add automounts for singularity maxibor 2019-04-25 15:48:20 +0200
  • 7d7c18273b
    Merge pull request #41 from tobsecret/master Alexander Peltzer 2019-04-19 00:13:49 +0200
  • d91b06d884 added missing line in prince and bigpurple docs Tobias Schraink 2019-04-18 14:25:27 -0400
  • b6c1d3ba51 added bigpurple and prince doc links in README Tobias Schraink 2019-04-18 14:23:17 -0400
  • 4ba831705d added nyu prince and bigpurple md files, added singularity cacheDir to prince and bigpurple configs Tobias Schraink 2019-04-18 14:13:02 -0400
  • f699c3ad18
    Merge pull request #40 from maxibor/master Alexander Peltzer 2019-04-18 12:21:22 +0200
  • 9d9ac4c3bb remove whitespace maxibor 2019-04-18 11:22:54 +0200
  • c41dd2c65f Merge branch 'master' of https://github.com/nf-core/configs maxibor 2019-04-18 11:21:27 +0200
  • 1772f4119c adding igenomes to shh config maxibor 2019-04-18 11:19:53 +0200
  • 4a915e330a added warnings to run on SCRATCH Tobias Schraink 2019-04-17 17:15:16 -0400
  • 51c2a54399 added nyu prince and bigpurple configs Tobias Schraink 2019-04-17 16:59:38 -0400
  • 37ae0fa3a6
    Merge pull request #38 from maxibor/master James A. Fellows Yates 2019-03-20 13:52:59 +0100
  • 76a5fcf077 switch to queueSize 16 for shh config maxibor 2019-03-20 13:44:13 +0100
  • 0929349303 add queueSize limited to 5 maxibor 2019-03-18 11:13:11 +0100
  • 009e8f52e3
    Merge pull request #37 from KochTobi/patch-1 Phil Ewels 2019-03-16 16:26:46 +0100
  • aaa7be049a
    Update cfc config KochTobi 2019-03-16 14:11:59 +0100
  • d95b464e13
    Merge pull request #35 from jfy133/master Alexander Peltzer 2019-03-15 09:56:44 +0100
  • ecb36dd8c2
    Reduced memory and CPUs for cdag compatibility James A. Fellows Yates 2019-03-14 21:26:43 +0100
  • e503a3a064
    Added new cluster and singularity cache James A. Fellows Yates 2019-03-14 21:21:31 +0100
  • 3da1373c14
    Updated path to centralised singularity cache James A. Fellows Yates 2019-03-14 21:16:02 +0100
  • b4e8e271be
    Merge pull request #3 from nf-core/master James A. Fellows Yates 2019-03-14 21:13:48 +0100
  • 2e9a8642c0
    Merge pull request #32 from phue/update-mendel-documentation Phil Ewels 2019-03-14 15:04:39 +0100
  • 79eb58bbb8
    Merge pull request #34 from drpatelh/master Phil Ewels 2019-03-13 18:04:26 +0100
  • 26c101a5ab
    Alphabetical order Harshil Patel 2019-03-13 16:53:30 +0000
  • 1843b2218c
    Update nfcore_custom.config Harshil Patel 2019-03-13 16:52:57 +0000
  • 857b0565c2
    Update nfcore_custom.config Harshil Patel 2019-03-13 16:51:45 +0000
  • 8bc975c8c3
    Merge pull request #33 from ewels/master Harshil Patel 2019-03-13 16:49:43 +0000
  • d0ca05a221 ; Phil Ewels 2019-03-13 17:33:23 +0100
  • 1191863e1c Removed params.config_profile_name, added params.hostnames Phil Ewels 2019-03-13 17:15:16 +0100
  • 4ac14cd6aa
    Merge pull request #30 from apeltzer/master Phil Ewels 2019-03-13 09:15:04 +0100
  • 13df59bfaf remove singularity support phue 2019-03-12 17:57:31 +0000
  • b19887af10 Merge remote-tracking branch 'upstream/master' Alexander Peltzer 2019-03-12 18:49:01 +0100
  • fbf9397182 Bump Alexander Peltzer 2019-03-12 18:48:29 +0100
  • ee249ca7af
    Merge pull request #31 from ewels/master Alexander Peltzer 2019-03-12 18:42:55 +0100
  • eaa1c8360f Travis multiline yaml Phil Ewels 2019-03-12 17:25:16 +0100
  • a79564f0af Remove requirement for dev branch PRs Phil Ewels 2019-03-12 17:02:24 +0100
  • 3ee7195fa8 Central resource for both binac and cfc now Alexander Peltzer 2019-03-12 14:58:41 +0100
  • 1e2c0c3e04
    Merge pull request #29 from apeltzer/master Phil Ewels 2019-03-11 18:26:19 +0100
  • 68b759d6ef Mini Update Alexander Peltzer 2019-03-11 18:12:35 +0100
  • f4f3c4e53b Roll out binac too Alexander Peltzer 2019-03-11 14:29:42 +0100
  • 880adfbb98
    Merge pull request #28 from nf-core/ewels-patch-1 Alexander Peltzer 2019-03-08 17:05:56 +0100
  • ef1aeafef6
    Remove incorrect comment in code example Phil Ewels 2019-03-08 16:41:47 +0100
  • ceecc15ac8
    Merge pull request #27 from apeltzer/master Phil Ewels 2019-03-08 16:38:15 +0100
  • c8c150d67c Add the TravisCI badge as we have tests now Alexander Peltzer 2019-03-08 13:39:25 +0100
  • a2fa9d3f01
    Merge pull request #24 from nf-core/dev Phil Ewels 2019-03-08 12:36:27 +0100
  • ba3d221af6 Corrects regex Sven Fillinger 2019-03-08 12:23:27 +0100
  • bbe0d30462 Fixes syntax error in travis script Sven Fillinger 2019-03-08 12:00:43 +0100
  • d4cd9b1f0a Corrects profile grep Sven Fillinger 2019-03-08 11:58:37 +0100
  • e401769698 Corrects NXF command line call Sven Fillinger 2019-03-08 10:54:41 +0100
  • 7962f7d756 Iterates over profiles and calls Nextflow Sven Fillinger 2019-03-08 10:52:09 +0100
  • 1dc523d726 Removes test config Sven Fillinger 2019-03-08 10:37:27 +0100
  • 4d43077ddf Adds simple NXF config script Sven Fillinger 2019-03-08 10:36:03 +0100
  • a4acbc3a10
    Merge pull request #26 from apeltzer/master Alexander Peltzer 2019-03-07 16:15:26 +0100
  • 6b21538062 Rolling out iGenomes now Alexander Peltzer 2019-03-07 16:12:30 +0100
  • 4e1cb46dc5
    Update nfcore_custom.config Sven F 2019-03-06 20:22:45 +0100
  • da1b4572d3
    Update .travis.yml Sven F 2019-03-06 20:11:20 +0100
  • 23c05308de
    Merge branch 'master' into dev Sven F 2019-03-06 19:54:32 +0100
  • af81005563
    Uses dev branch for now Sven F 2019-03-06 19:51:03 +0100
  • 91d1456746
    Merge pull request #25 from drpatelh/master Harshil Patel 2019-03-06 18:43:46 +0000
  • 53d56310bb Added conf folder to paths drpatelh 2019-03-06 18:14:45 +0000
  • dcc2680ad5
    Uses checked out config version Sven F 2019-03-06 18:32:14 +0100
  • 5395156d22
    Merge pull request #23 from sven1103/master Sven F 2019-03-06 18:24:48 +0100
  • fe9d85b23c Fixes unresolved var Sven Fillinger 2019-03-06 18:20:56 +0100
  • 7ec2532b78 Points config version to current branch Sven Fillinger 2019-03-06 17:58:43 +0100
  • 638f986f34 Adds profile integration tests Sven Fillinger 2019-03-06 17:42:14 +0100
  • 6370484894
    Merge pull request #22 from ewels/master Harshil Patel 2019-03-06 16:09:02 +0000
  • 6daf76f47d Hotfix for breaking pipelines that don't already support params.custom_config_base Phil Ewels 2019-03-06 17:03:13 +0100
  • a2f5522396
    Merge pull request #19 from apeltzer/make_elvis_great_again Alexander Peltzer 2019-03-06 13:16:31 +0100
  • ad47005fb6
    Update nfcore_custom.config Sven F 2019-03-06 13:13:52 +0100
  • 20deaf3b46 Provide fix for online issues Alexander Peltzer 2019-03-06 12:59:54 +0100
  • 8ebcfa26a9
    Update nfcore_custom.config Alexander Peltzer 2019-03-06 08:21:34 +0100
  • c39b4589dd
    Merge pull request #17 from ewels/master Phil Ewels 2019-03-05 16:56:13 +0100
  • d115909343 Tyop Phil Ewels 2019-03-05 16:53:59 +0100
  • e0ba8e6f07 Tweak the readme Phil Ewels 2019-03-05 16:28:10 +0100
  • 9fb5715c4c Added support for new params.custom_config_base option Phil Ewels 2019-03-05 16:12:39 +0100
  • 6541f77dc4
    Merge pull request #16 from phue/mendel-update Alexander Peltzer 2019-02-28 08:39:40 +0100
  • 6fc65b54a2 add mendel.md phue 2019-02-27 22:26:31 +0000
  • 59887d9bc8 update config for MENDEL cluster phue 2019-02-27 16:03:26 +0000
  • 164ae59568
    Update cfc.config Alexander Peltzer 2019-02-21 10:49:29 +0100
  • d6ea834f40
    Update cfc.config Alexander Peltzer 2019-02-21 09:17:28 +0100
  • 637ffb782c
    Fix CFC config Alexander Peltzer 2019-02-19 17:03:53 +0100
  • 6d9faa1777
    Merge pull request #14 from jfy133/master James A. Fellows Yates 2019-01-21 20:33:12 +0100
  • 7a51c684f5
    Made small SLURM queue change for SHH James A. Fellows Yates 2019-01-21 20:31:37 +0100
  • 13cda2f1d2
    Merge pull request #2 from nf-core/master James A. Fellows Yates 2019-01-21 20:30:45 +0100
  • 9962e5b3f2
    Merge pull request #13 from drpatelh/master Alexander Peltzer 2019-01-11 16:04:52 +0100
  • 24fb466bc0 Changed description for Singularity image download drpatelh 2019-01-11 14:52:15 +0000
  • de1c04ec2a
    Merge pull request #12 from matq007/munin-config Harshil Patel 2019-01-11 14:41:10 +0000
  • 789d211b18
    Update munin.md Harshil Patel 2019-01-11 14:32:35 +0000
  • 7acd9cf7df
    Updating suggested changes Martin Proks 2019-01-11 15:28:10 +0100
  • 89dbb6c061
    Setting Singularity as default method Martin Proks 2019-01-11 14:37:12 +0100
  • 548c8bca3f
    Updated munin doc and configuration Martin Proks 2019-01-10 15:46:16 +0100
  • f259178642
    Added munin config boilerplate Martin Proks 2019-01-09 17:27:55 +0100
  • b9bc420071
    Merge pull request #11 from jfy133/SHH_docs James A. Fellows Yates 2019-01-07 20:36:53 +0100
  • f62613588f
    Removed newline typo James A. Fellows Yates 2019-01-07 20:35:40 +0100
  • 2344b16693
    Merge pull request #1 from jfy133/SHH_documentation James A. Fellows Yates 2019-01-07 20:28:47 +0100
  • 7f3acac4f4
    Create shh documentation James A. Fellows Yates 2019-01-07 20:28:31 +0100
  • 0325e556f2
    Fixed the mysterious 'insert here' Institution James A. Fellows Yates 2019-01-07 20:25:39 +0100