Adam Talbot 43d05d5482 fix (1852): picard/collectmultiplemetrics supports CRAM (#1853) ... * fix (1852): picard/collectmultiplemetrics supports CRAM Changes: - Add .fai input to Picard CollectMultipleMetrics - Now supports CRAM effectively. - Will break existing pipelines! Fixes #1852 * 1852 Update meta.yml to include .fai		2022-07-06 19:05:53 +02:00
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addorreplacereadgroups	drop md5sum from versions.yml	2022-04-29 08:19:42 +02:00
cleansam	drop md5sum from versions.yml	2022-04-29 08:19:42 +02:00
collecthsmetrics	fix tests	2022-05-22 06:51:27 +02:00
collectmultiplemetrics	fix (1852): picard/collectmultiplemetrics supports CRAM (#1853)	2022-07-06 19:05:53 +02:00
collectwgsmetrics	fix tests (again)	2022-05-22 06:54:09 +02:00
createsequencedictionary	drop md5sum from versions.yml	2022-04-29 08:19:42 +02:00
crosscheckfingerprints	Tool/crosscheckfingerprints (#1505)	2022-04-08 10:02:10 -04:00
filtersamreads	Fix formatting in yaml files, add yamllint config (#1279)	2022-02-15 11:15:27 +00:00
fixmateinformation	remove version md5sum from fixmateinformation	2022-04-29 10:12:52 +02:00
liftovervcf	fix args in nextflow.config	2022-04-29 10:21:22 +02:00
markduplicates	fix args in nextflow.config	2022-04-29 10:13:39 +02:00
mergesamfiles	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
sortsam	Change syntax from task.ext.suffix to tast.ext.prefix in all modules (#1110)	2021-12-02 12:39:55 +00:00
sortvcf	Add picard/sortvcf (#1370)	2022-03-03 11:40:16 -05:00