ci: Add Woodpecker workflow

Bumps [yaml](https://github.com/eemeli/yaml) from 2.2.1 to 2.2.2.
- [Release notes](https://github.com/eemeli/yaml/releases)
- [Commits](https://github.com/eemeli/yaml/compare/v2.2.1...v2.2.2)

---
updated-dependencies:
- dependency-name: yaml
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <support@github.com>

.domains

@@ -1,5 +0,0 @@
-millironx.com
-www.millironx.com
-millironx.pages.millironx.com
-pages.millironx.pages.millironx.com
-pages.pages.millironx.pages.millironx.com

.envrc

@@ -0,0 +1,2 @@
+use nix
+layout node

.gitattributes

@@ -0,0 +1 @@
+assets/scripts/pro-duotone-svg-icons/** filter=git-crypt diff=git-crypt

.github/workflows/hugo.yml

@@ -0,0 +1,90 @@
+# Sample workflow for building and deploying a Hugo site to GitHub Pages
+name: Deploy Hugo site to Pages
+
+on:
+  # Runs on pushes targeting the default branch
+  push:
+    branches: ["master"]
+
+  # Allows you to run this workflow manually from the Actions tab
+  workflow_dispatch:
+
+# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages
+permissions:
+  contents: read
+  pages: write
+  id-token: write
+
+# Allow one concurrent deployment
+concurrency:
+  group: "pages"
+  cancel-in-progress: true
+
+# Default to bash
+defaults:
+  run:
+    shell: bash
+
+jobs:
+  # Build job
+  build:
+    runs-on: ubuntu-latest
+    env:
+      HUGO_VERSION: 0.111.3
+      NODE_VERSION: 18.14.2
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v3
+        with:
+          submodules: recursive
+          fetch-depth: 0
+      - name: Install git-crypt
+        run: |
+          sudo apt-get install git-crypt -y
+      - name: Decrypt repository
+        run: |
+          echo "${{ secrets.GIT_CRYPT_KEY }}" \
+            | base64 --decode \
+            > ~/millironx.github.io.key
+          git-crypt unlock ~/millironx.github.io.key
+      - name: Install Node.js
+        uses: actions/setup-node@v3
+        with:
+          node-version: "${{ env.NODE_VERSION }}"
+      - name: Install Hugo CLI
+        uses: peaceiris/actions-hugo@v2
+        with:
+          hugo-version: "${{ env.HUGO_VERSION }}"
+          extended: true
+      - name: Setup Pages
+        id: pages
+        uses: actions/configure-pages@v2
+      - name: Install postcss cli
+        run: npm install -g postcss-cli
+      - name: Install Node.js dependencies
+        run: npm ci
+      - name: Build with Hugo
+        env:
+          # For maximum backward compatibility with Hugo modules
+          HUGO_ENVIRONMENT: production
+          HUGO_ENV: production
+        run: |
+          hugo \
+            --minify \
+            --baseURL "${{ steps.pages.outputs.base_url }}/"
+      - name: Upload artifact
+        uses: actions/upload-pages-artifact@v1
+        with:
+          path: ./public
+
+  # Deployment job
+  deploy:
+    environment:
+      name: github-pages
+      url: ${{ steps.deployment.outputs.page_url }}
+    runs-on: ubuntu-latest
+    needs: build
+    steps:
+      - name: Deploy to GitHub Pages
+        id: deployment
+        uses: actions/deploy-pages@v1

.gitignore

@@ -0,0 +1,153 @@
+### Jekyll gitignore ###
+_site/
+.sass-cache/
+.jekyll-cache/
+.jekyll-metadata
+
+### Hugo gitignore ###
+# Generated files by hugo
+/public/
+/resources/_gen/
+/assets/jsconfig.json
+hugo_stats.json
+
+# Executable may be added to repository
+hugo.exe
+hugo.darwin
+hugo.linux
+
+# Temporary lock file while building
+/.hugo_build.lock
+
+### Node gitignore ###
+
+# Logs
+logs
+*.log
+npm-debug.log*
+yarn-debug.log*
+yarn-error.log*
+lerna-debug.log*
+.pnpm-debug.log*
+
+# Diagnostic reports (https://nodejs.org/api/report.html)
+report.[0-9]*.[0-9]*.[0-9]*.[0-9]*.json
+
+# Runtime data
+pids
+*.pid
+*.seed
+*.pid.lock
+
+# Directory for instrumented libs generated by jscoverage/JSCover
+lib-cov
+
+# Coverage directory used by tools like istanbul
+coverage
+*.lcov
+
+# nyc test coverage
+.nyc_output
+
+# Grunt intermediate storage (https://gruntjs.com/creating-plugins#storing-task-files)
+.grunt
+
+# Bower dependency directory (https://bower.io/)
+bower_components
+
+# node-waf configuration
+.lock-wscript
+
+# Compiled binary addons (https://nodejs.org/api/addons.html)
+build/Release
+
+# Dependency directories
+node_modules/
+jspm_packages/
+
+# Snowpack dependency directory (https://snowpack.dev/)
+web_modules/
+
+# TypeScript cache
+*.tsbuildinfo
+
+# Optional npm cache directory
+.npm
+
+# Optional eslint cache
+.eslintcache
+
+# Optional stylelint cache
+.stylelintcache
+
+# Microbundle cache
+.rpt2_cache/
+.rts2_cache_cjs/
+.rts2_cache_es/
+.rts2_cache_umd/
+
+# Optional REPL history
+.node_repl_history
+
+# Output of 'npm pack'
+*.tgz
+
+# Yarn Integrity file
+.yarn-integrity
+
+# dotenv environment variable files
+.env
+.env.development.local
+.env.test.local
+.env.production.local
+.env.local
+
+# parcel-bundler cache (https://parceljs.org/)
+.cache
+.parcel-cache
+
+# Next.js build output
+.next
+out
+
+# Nuxt.js build / generate output
+.nuxt
+dist
+
+# Gatsby files
+.cache/
+# Comment in the public line in if your project uses Gatsby and not Next.js
+# https://nextjs.org/blog/next-9-1#public-directory-support
+# public
+
+# vuepress build output
+.vuepress/dist
+
+# vuepress v2.x temp and cache directory
+.temp
+.cache
+
+# Docusaurus cache and generated files
+.docusaurus
+
+# Serverless directories
+.serverless/
+
+# FuseBox cache
+.fusebox/
+
+# DynamoDB Local files
+.dynamodb/
+
+# TernJS port file
+.tern-port
+
+# Stores VSCode versions used for testing VSCode extensions
+.vscode-test
+
+# yarn v2
+.yarn/cache
+.yarn/unplugged
+.yarn/build-state.yml
+.yarn/install-state.gz
+.pnp.*

.gitpod.yml

@@ -0,0 +1,10 @@
+# List the start up tasks. Learn more https://www.gitpod.io/docs/config-start-tasks/
+tasks:
+  - name: Install Hugo dependencies
+    before: brew install hugo
+    init: echo "Your version of Hugo is `hugo version`"
+    command: npm ci && hugo server -D -F --baseUrl $(gp url 1313) --liveReloadPort=443 --appendPort=false --bind=0.0.0.0
+# List the ports to expose. Learn more https://www.gitpod.io/docs/config-ports/
+ports:
+  - port: 1313
+    onOpen: open-preview

.husky/.gitignore

@@ -0,0 +1 @@
+_

.husky/pre-commit

@@ -0,0 +1,4 @@
+#!/bin/sh
+. "$(dirname "$0")/_/husky.sh"
+
+npx lint-staged

.prettierignore

@@ -0,0 +1,2 @@
+node_modules
+themes

.prettierrc

@@ -0,0 +1,6 @@
+"$schema": "http://json.schemastore.org/prettierrc"
+proseWrap: always
+overrides:
+  - files: "*.html"
+    options:
+      parser: "go-template"

.woodpecker/build-site.yml

@@ -0,0 +1,29 @@
+when:
+  branch: "master"
+
+steps:
+  - name: Decrypt repository
+    image: truemark/git-crypt:beta-0.7.0-alpine-3.17
+    commands:
+      - echo "${GIT_CRYPT_KEY}" | base64 --decode > ./.git-crypt-key
+      - git-crypt unlock ./.git-crypt-key
+      - rm ./.git-crypt-key
+    secrets:
+      - git_crypt_key
+  - name: Install Node packages
+    image: node:18.14.2-slim
+    commands:
+      - npm ci
+  - name: Build Hugo site
+    image: peaceiris/hugo:v0.111.3-full
+    environment:
+      HUGO_ENV: production
+      HUGO_ENVIRONMENT: production
+    commands:
+      - hugo --minify
+  - name: Deploy to pages
+    image: codeberg.org/xfix/plugin-codeberg-pages-deploy:1
+    settings:
+      folder: public
+      ssh_key:
+        from_secret: ssh_key

LICENSE

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2021 Thomas A. Christensen II
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

README.md

@@ -0,0 +1,3 @@
+# millironx.github.io
+
+My personal website. Now hosted over at https://millironx.com

academia/cheme-car/index.html

@@ -1,23 +0,0 @@
-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>The ChemE Car that Cud: AIChE ChemE Car Engineering Design Proposal - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
-Home
-</a><a href=/contact/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M224 0H0V512H384V427l-1.7 1.7-120.1 17.2-11.7 1.9-11.6 1.9-5.3-10.5L222.1 416H209.9l-11.6 23.2-4.4 8.8H184h-8-11.9l-3.4-11.4L144 381l-16.7 55.6L123.9 448H112 80 64V416H80h20.1l20.6-68.6 3.4-11.4H136h16 11.9l3.4 11.4 15.4 51.4 3-5.9 4.4-8.8H2e2h32 9.9l4.4 8.8 7.2 14.5 13.5-94 117-117V160H224V0zm32 0V128H384L256 0zM505 119.8l-41.3 41.3 71 71L576 190.8l-71-71zm-63.9 63.9L299.9 325 288 407.9 370.9 396 512.1 254.7l-71-71z"/></svg></span>
-Contact
-</a><a href=/academia/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 144 256 0 512 144v48H0V144zM0 512V464l64-48V224h64V416h40V224h64V416h48V224h64V416h40V224h64V416l64 48v48H0zM256 144a32 32 0 100-64 32 32 0 100 64z"/></svg></span>
-Academia
-</a><a href=/videos/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span>
-Videos
-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><section><h5>University of Wyoming Honors Program: Laramie, Wyoming</h5><h2>The ChemE Car that Cud: AIChE ChemE Car Engineering Design Proposal</h2><h3><small><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a></small></h3><h4>May 14, 2019</h4><p>The ChemE Car That Cud showcases Wyoming&rsquo;s dominant industries of agriculture
-and mining by utilizing rumen fluid from a cannulated beef cow to generate
-hydrogen to be used in a hydrogen fuel cell and radioactive cesium, a byproduct
-of uranium that is often obtained from Wyoming&rsquo;s mines, to time the car&rsquo;s stop.
-The concentration of cesium-137 source is measured using the radioactive decay
-of cesium shielded by aluminum. The painted aluminum chassis was obtained from a
-previous team at UW, and modified using plastic k&rsquo;nex toys to adapt to the
-current power source and stopping mechanism.</p><a href=https://doi.org/10.15786/13700938.v1>https://doi.org/10.15786/13700938.v1</a>
-<iframe src=https://doi.org/10.15786/13700938.v1 style=width:100%;height:75vh></iframe></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2019 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

academia/how-to-build-a-cow-cud-fuel-cell/index.html

@@ -1,15 +0,0 @@
-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>How to Build a Cow-Cud Fuel Cell - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
-Home
-</a><a href=/contact/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M224 0H0V512H384V427l-1.7 1.7-120.1 17.2-11.7 1.9-11.6 1.9-5.3-10.5L222.1 416H209.9l-11.6 23.2-4.4 8.8H184h-8-11.9l-3.4-11.4L144 381l-16.7 55.6L123.9 448H112 80 64V416H80h20.1l20.6-68.6 3.4-11.4H136h16 11.9l3.4 11.4 15.4 51.4 3-5.9 4.4-8.8H2e2h32 9.9l4.4 8.8 7.2 14.5 13.5-94 117-117V160H224V0zm32 0V128H384L256 0zM505 119.8l-41.3 41.3 71 71L576 190.8l-71-71zm-63.9 63.9L299.9 325 288 407.9 370.9 396 512.1 254.7l-71-71z"/></svg></span>
-Contact
-</a><a href=/academia/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 144 256 0 512 144v48H0V144zM0 512V464l64-48V224h64V416h40V224h64V416h48V224h64V416h40V224h64V416l64 48v48H0zM256 144a32 32 0 100-64 32 32 0 100 64z"/></svg></span>
-Academia
-</a><a href=/videos/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span>
-Videos
-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><section><h5>Idaho INBRE Summer Research Conference: Moscow, Idaho</h5><h2>How to Build a Cow-Cud Fuel Cell</h2><h3><small><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a></small></h3><h4>August 1, 2018</h4></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2018 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

academia/hydronium-pva/index.html

@@ -1,45 +0,0 @@
-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>Investigation of Hydronium Diffusion in Poly(vinyl alcohol) Hydrogels: A Critical First Step to Describe Acid Transport for Encapsulated Bioremediation - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
-Home
-</a><a href=/contact/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M224 0H0V512H384V427l-1.7 1.7-120.1 17.2-11.7 1.9-11.6 1.9-5.3-10.5L222.1 416H209.9l-11.6 23.2-4.4 8.8H184h-8-11.9l-3.4-11.4L144 381l-16.7 55.6L123.9 448H112 80 64V416H80h20.1l20.6-68.6 3.4-11.4H136h16 11.9l3.4 11.4 15.4 51.4 3-5.9 4.4-8.8H2e2h32 9.9l4.4 8.8 7.2 14.5 13.5-94 117-117V160H224V0zm32 0V128H384L256 0zM505 119.8l-41.3 41.3 71 71L576 190.8l-71-71zm-63.9 63.9L299.9 325 288 407.9 370.9 396 512.1 254.7l-71-71z"/></svg></span>
-Contact
-</a><a href=/academia/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 144 256 0 512 144v48H0V144zM0 512V464l64-48V224h64V416h40V224h64V416h48V224h64V416h40V224h64V416l64 48v48H0zM256 144a32 32 0 100-64 32 32 0 100 64z"/></svg></span>
-Academia
-</a><a href=/videos/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span>
-Videos
-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><section><h5>ACS ES&amp;T Engineering</h5><h2>Investigation of Hydronium Diffusion in Poly(vinyl alcohol) Hydrogels: A Critical First Step to Describe Acid Transport for Encapsulated Bioremediation</h2><h3><small><a href=/people/carson-j.-silsby/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Carson J. Silsby</a>
-<a href=/people/jonathan-r.-counts/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jonathan R. Counts</a>
-<a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/mark-f.-roll/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Mark F. Roll</a>
-<a href=/people/kristopher-v.-waynant/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kristopher v. Waynant</a>
-<a href=/people/james-g.-moberly/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James G. Moberly</a></small></h3><h4>September 2, 2022</h4><p>Bioremediation of chlorinated aliphatic hydrocarbon-contaminated aquifers can be
-hindered by high contaminant concentrations and acids generated during
-remediation. Encapsulating microbes in hydrogels may provide a protective,
-tunable environment from inhibiting compounds; however, current approaches to
-formulate successful encapsulated systems rely on trial and error rather than
-engineering approaches because fundamental information on mass-transfer
-coefficients is lacking. To address this knowledge gap, hydronium ion
-mass-transfer rates through two commonly used hydrogel materials, poly(vinyl
-alcohol) and alginic acid, under two solidification methods (chemical and
-cryogenic) were measured. Variations in hydrogel crosslinking conditions,
-polymer composition, and solvent ionic strength were investigated to understand
-how each influenced hydronium ion diffusivity. A three-way ANOVA indicated that
-the ionic strength, membrane type, and crosslinking method significantly (<em>p</em> &lt;
-0.001) contributed to changes in hydronium ion mass transfer. Hydronium ion
-diffusion increased with ionic strength, counter to what is observed in
-aqueous-only (no polymer) solutions. Co-occurring mechanisms correlated to
-increased hydronium ion diffusion with ionic strength included an increased
-water fraction within hydrogel matrices and hydrogel contraction. Measured
-diffusion rates determined in this study provide first principal design
-information to further optimize encapsulating hydrogels for bioremediation.</p><a href=https://doi.org/10.1021/acsestengg.2c00107>https://doi.org/10.1021/acsestengg.2c00107</a>
-<iframe src=https://doi.org/10.1021/acsestengg.2c00107 style=width:100%;height:75vh></iframe></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2022 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

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-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
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-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><style>.motto::before{background-image:url(/images/library_hu6756e41dd5621a1e254550fbe815c3a2_204150_6000x2000_fill_q75_box_center.jpg)}</style><div class=motto title="Personally, I preferred the Owen Library in Pullman seven miles west"><div class=motto-inside><h1 id=motto>Publications and Presentations</h1></div></div><section><div><blockquote><p>I have spent too long in school and not enough time in the middle of nowhere</p><p>&ndash; Baxter Black, DVM</p></blockquote><p>During my time in academia, I have amassed a few notable accomplishments. Of
-course, as the old saying goes, &ldquo;if it isn&rsquo;t published, then it never happened,&rdquo;
-so here is a list of everything that actually happened. Several of these
-articles are also available on
-<a href="https://scholar.google.com/citations?user=gbP4RDgAAAAJ">my Google Scholar page</a>,
-but this is the complete list.</p></div><div class=card><a class=category-button href=/categories/paper/ title=Paper><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M96 0C43 0 0 43 0 96V416c0 53 43 96 96 96H384h32 32V448H416V384h32V0H416 384 96zm0 384H352v64H96c-17.7.0-32-14.3-32-32s14.3-32 32-32zm32-256H352v32H128V128zm224 64v32H128V192H352z"/></svg></span></a><div class=card-body><div class=card-title><a href=https://doi.org/10.1101/2023.10.20.563221><h3>nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling</h3></a></div><div>23 Oct 2023</div><a href=/people/sofia-stamouli/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Sofia Stamouli</a>
-<a href=/people/moritz-e.-beber/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Moritz E. Beber</a>
-<a href=/people/tanja-normark/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Tanja Normark</a>
-<a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/lili-andersson-li/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Lili Andersson-Li</a>
-<a href=/people/maxime-borry/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Maxime Borry</a>
-<a href=/people/mahwash-jamy/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Mahwash Jamy</a>
-<a href=/people/nf-core-community/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Nf-Core Community</a>
-<a href=/people/james-a.-fellows-yate/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James A. Fellows Yate</a><p class=card-text>Metagenomic classification tackles the problem of characterising the taxonomic source of all DNA sequencing reads in a sample. A common approach to address the differences and biases between the many different taxonomic classification tools is to run metagenomic data through multiple classification tools and databases. This, however, is a very time-consuming task when performed manually - particularly when combined with the appropriate preprocessing of sequencing reads before the classification. Here we present nf-core/taxprofiler, a highly parallelised read-processing and taxonomic classification pipeline.
-<strong><small><a href=https://doi.org/10.1101/2023.10.20.563221>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/genomics/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Genomics</a></div></div></div><div class=card><a class=category-button href=/categories/paper/ title=Paper><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M96 0C43 0 0 43 0 96V416c0 53 43 96 96 96H384h32 32V448H416V384h32V0H416 384 96zm0 384H352v64H96c-17.7.0-32-14.3-32-32s14.3-32 32-32zm32-256H352v32H128V128zm224 64v32H128V192H352z"/></svg></span></a><div class=card-body><div class=card-title><a href=https://doi.org/10.1021/acsestengg.2c00107><h3>Investigation of Hydronium Diffusion in Poly(vinyl alcohol) Hydrogels: A Critical First Step to Describe Acid Transport for Encapsulated Bioremediation</h3></a></div><div>02 Sep 2022</div><a href=/people/carson-j.-silsby/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Carson J. Silsby</a>
-<a href=/people/jonathan-r.-counts/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jonathan R. Counts</a>
-<a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/mark-f.-roll/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Mark F. Roll</a>
-<a href=/people/kristopher-v.-waynant/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kristopher v. Waynant</a>
-<a href=/people/james-g.-moberly/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James G. Moberly</a><p class=card-text>Bioremediation of chlorinated aliphatic hydrocarbon-contaminated aquifers can be hindered by high contaminant concentrations and acids generated during remediation. Encapsulating microbes in hydrogels may provide a protective, tunable environment from inhibiting compounds; however, current approaches to formulate successful encapsulated systems rely on trial and error rather than engineering approaches because fundamental information on mass-transfer coefficients is lacking. To address this knowledge gap, hydronium ion mass-transfer rates through two commonly used hydrogel materials, poly(vinyl alcohol) and alginic acid, under two solidification methods (chemical and cryogenic) were measured.
-<strong><small><a href=https://doi.org/10.1021/acsestengg.2c00107>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/diffusion/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Diffusion</a>
-<a href=/tags/hydrogels/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Hydrogels</a>
-<a href=/tags/ionic-strength/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Ionic Strength</a>
-<a href=/tags/polymers/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Polymers</a>
-<a href=/tags/transport-properties/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Transport Properties</a></div></div></div><div class=card><a class=category-button href=/categories/paper/ title=Paper><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M96 0C43 0 0 43 0 96V416c0 53 43 96 96 96H384h32 32V448H416V384h32V0H416 384 96zm0 384H352v64H96c-17.7.0-32-14.3-32-32s14.3-32 32-32zm32-256H352v32H128V128zm224 64v32H128V192H352z"/></svg></span></a><div class=card-body><div class=card-title><a href=https://doi.org/10.1016/j.vetmic.2022.109447><h3>Assessment of Porcine Rotavirus-associated virome variations in pigs with enteric disease</h3></a></div><div>27 Apr 2022</div><a href=/people/tyler-doerksen/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Tyler Doerksen</a>
-<a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/andrea-lu/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Andrea Lu</a>
-<a href=/people/lance-noll/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Lance Noll</a>
-<a href=/people/jianfa-bai/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jianfa Bai</a>
-<a href=/people/jamie-henningson/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jamie Henningson</a>
-<a href=/people/rachel-palinski/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Rachel Palinski</a><p class=card-text>Enteric disease is the predominant cause of morbidity and mortality in young mammals including pigs. Viral species involved in porcine enteric disease complex (PEDC) include rotaviruses, coronaviruses, picornaviruses, astroviruses and pestiviruses among others. The virome of three groups of swine samples submitted to the Kansas State University Veterinary Diagnostic Laboratory for routine testing were assessed, namely, a Rotavirus A positive (RVA) group, a Rotavirus co-infection (RV) group and a Rotavirus Negative (RV Neg) group.
-<strong><small><a href=https://doi.org/10.1016/j.vetmic.2022.109447>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/porcine-rotavirus/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Porcine Rotavirus</a>
-<a href=/tags/porcine-enteric-disease/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Porcine Enteric Disease</a>
-<a href=/tags/virome/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Virome</a>
-<a href=/tags/rotavirus/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Rotavirus</a></div></div></div><div class=card><a class=category-button href=/categories/thesis/ title=Thesis><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 640 512"><path d="M640 176 320 288 127.8 220.7l198.1-77.8 14.9-5.9L329 107.3l-14.9 5.9-224 88-8.7 3.4L80 204V346.8c15.4 25.1 27.8 68.4.0 133.2L0 464s32.5-46.5 48-96.9V192.8L0 176V144L320 32 640 144v32zM143.6 260.2l165.9 58.1 10.6 3.7 10.6-3.7 165.9-58.1L512 408c0 35.3-86 72-192 72s-192-36.7-192-72l15.6-147.8z"/></svg></span></a><div class=card-body><div class=card-title><a href=https://www.proquest.com/dissertations-theses/polyoxometalate-incorporation-effects-on-proton/docview/2502214356/se-2><h3>Polyoxometalate Incorporation and Effects on Proton Transport in Hydrogel Polymers</h3></a></div><div>07 Aug 2020</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a><p class=card-text>Polyoxometalate clusters embedded into hydrogel biobeads may be able to solve the challenges posed by free proton generation during remediation of trichloroethylene by acting as buffers and reducing protons to hydrogen gas. In this thesis, the challenges posed by systems that contain both diffusion and reaction processes for protons are considered mathematically, and a computer simulation to was developed to prove the relationship between diaphragm cell lag period and reactive capabilities of membranes.
-<strong><small><a href=https://www.proquest.com/dissertations-theses/polyoxometalate-incorporation-effects-on-proton/docview/2502214356/se-2>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/bioremediation/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Bioremediation</a>
-<a href=/tags/polyoxometalate/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Polyoxometalate</a>
-<a href=/tags/hydrogel-polymers/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Hydrogel Polymers</a>
-<a href=/tags/proton-transport/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Proton Transport</a>
-<a href=/tags/chemical-engineering/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Chemical Engineering</a></div></div></div><div class=card><a class=category-button href=/categories/poster/ title=Poster><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M32 0H0V64H32V320v32H64 256v34.7l-54.6 54.6L178.7 464 224 509.3l22.6-22.6L288 445.3l41.4 41.4L352 509.3 397.3 464l-22.6-22.6L320 386.7V352H512h32V320 64h32V0H544 480 96 32zM96 64H480V288H320 256 96V64z"/></svg></span></a><div class=card-body><div class=card-title><a href=/academia/metagenomics/metagenomics_analysis_of_rumen_populations.pdf><h3>Metagenomic analysis of rumen populations in week-old calves as altered by maternal late gestational nutrition and mode of delivery</h3></a></div><div>12 Jun 2019</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/kathy-j.-austin/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kathy J. Austin</a>
-<a href=/people/kristi-m.-cammack/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kristi M. Cammack</a>
-<a href=/people/hannah-c.-cunningham-hollinger/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Hannah C. Cunningham-Hollinger</a><p class=card-text>Early colonization of the rumen microbiome is critical to host health and long term performance. Factors that influence early colonization include maternal factors such as gestational nutrition and mode of delivery. Therefore, we hypothesized that late gestational nutrition and mode of delivery would influence the calf rumen microbiome. Our objectives were to determine if nutrient restriction during late gestation alters the calf rumen microbiome and determine if ruminal microbiome composition differs in calves born vaginally versus caesarean.
-<strong><small><a href=/academia/metagenomics/metagenomics_analysis_of_rumen_populations.pdf>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/gestation/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Gestation</a>
-<a href=/tags/metagenomics/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Metagenomics</a>
-<a href=/tags/microbiome/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Microbiome</a>
-<a href=/tags/rumen/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Rumen</a></div></div></div><div class=card><a class=category-button href=/categories/thesis/ title=Thesis><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 640 512"><path d="M640 176 320 288 127.8 220.7l198.1-77.8 14.9-5.9L329 107.3l-14.9 5.9-224 88-8.7 3.4L80 204V346.8c15.4 25.1 27.8 68.4.0 133.2L0 464s32.5-46.5 48-96.9V192.8L0 176V144L320 32 640 144v32zM143.6 260.2l165.9 58.1 10.6 3.7 10.6-3.7 165.9-58.1L512 408c0 35.3-86 72-192 72s-192-36.7-192-72l15.6-147.8z"/></svg></span></a><div class=card-header><img class=img-thumbnail src=/academia/cheme-car/thumbnail_hua27ceb9f6c1a8b01057b70de792ffbc6_1566619_600x0_resize_q75_box.jpg alt="Thumbnail of thumbnail.jpg"></div><div class=card-body><div class=card-title><a href=https://doi.org/10.15786/13700938.v1><h3>The ChemE Car that Cud: AIChE ChemE Car Engineering Design Proposal</h3></a></div><div>14 May 2019</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a><p class=card-text>The ChemE Car That Cud showcases Wyoming&rsquo;s dominant industries of agriculture and mining by utilizing rumen fluid from a cannulated beef cow to generate hydrogen to be used in a hydrogen fuel cell and radioactive cesium, a byproduct of uranium that is often obtained from Wyoming&rsquo;s mines, to time the car&rsquo;s stop. The concentration of cesium-137 source is measured using the radioactive decay of cesium shielded by aluminum. The painted aluminum chassis was obtained from a previous team at UW, and modified using plastic k&rsquo;nex toys to adapt to the current power source and stopping mechanism.
-<strong><small><a href=https://doi.org/10.15786/13700938.v1>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/chemical-engineering/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Chemical Engineering</a>
-<a href=/tags/aiche/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-AIChE</a>
-<a href=/tags/radiation/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Radiation</a>
-<a href=/tags/rumen/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Rumen</a>
-<a href=/tags/microbial-electrolysis-cells/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Microbial Electrolysis Cells</a></div></div></div><div class=card><a class=category-button href=/categories/poster/ title=Poster><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M32 0H0V64H32V320v32H64 256v34.7l-54.6 54.6L178.7 464 224 509.3l22.6-22.6L288 445.3l41.4 41.4L352 509.3 397.3 464l-22.6-22.6L320 386.7V352H512h32V320 64h32V0H544 480 96 32zM96 64H480V288H320 256 96V64z"/></svg></span></a><div class=card-body><div class=card-title><a href=/academia/pva-aiche/measuring_diffusion_of_trichloroethylene.pdf><h3>Measuring Diffusion of Trichlorethylene Breakdown Products in Polyvinylalginate</h3></a></div><div>29 Oct 2018</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/samuel-r.-wolfe/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Samuel R. Wolfe</a>
-<a href=/people/jonathan-counts/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jonathan Counts</a>
-<a href=/people/mark-f.-roll/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Mark F. Roll</a>
-<a href=/people/kristopher-v.-waynant/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kristopher v. Waynant</a>
-<a href=/people/james-g.-moberly/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James G. Moberly</a><p class=card-text>Trichloroethylene (TCE), a toxic and carcinogenic contaminant, presents unique challenges for cleanup because of its water solubility, density, and volatility. Bioremediation of TCE is a promising cleanup method; however, metabolism of TCE results in acid generation that inhibits remediating microorganisms. Calcium alginate(CA)-polyvinylalcohol (PVA) hydrogels show promise for protecting remediating microbes, however diffusion of TCE or its byproducts through these polymers is unknown. To measure the effective diffusion coefficient of TCE and byproducts through hydrogel membranes, we used a modified diaphragm cell.
-<strong><small><a href=/academia/pva-aiche/measuring_diffusion_of_trichloroethylene.pdf>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/bioremediation/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Bioremediation</a>
-<a href=/tags/polyoxometalate/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Polyoxometalate</a>
-<a href=/tags/hydrogel-polymers/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Hydrogel Polymers</a>
-<a href=/tags/proton-transport/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Proton Transport</a>
-<a href=/tags/chemical-engineering/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Chemical Engineering</a></div></div></div><div class=card><a class=category-button href=/categories/presentation/ title=Presentation><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M288 0H192V24H168c-48.6.0-88 39.4-88 88v32H24 0v48H24 424h24V144H424 128V112c0-22.1 17.9-40 40-40h24V96h96c26.5.0 48-21.5 48-48S314.5.0 288 0zM48 224 80 512H368l32-288H48z"/></svg></span></a><div class=card-body><div class=card-title><a href=/academia/how-to-build-a-cow-cud-fuel-cell/><h3>How to Build a Cow-Cud Fuel Cell</h3></a></div><div>01 Aug 2018</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a><p class=card-text><strong><small><a href=/academia/how-to-build-a-cow-cud-fuel-cell/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><a class=category-button href=/categories/poster/ title=Poster><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M32 0H0V64H32V320v32H64 256v34.7l-54.6 54.6L178.7 464 224 509.3l22.6-22.6L288 445.3l41.4 41.4L352 509.3 397.3 464l-22.6-22.6L320 386.7V352H512h32V320 64h32V0H544 480 96 32zM96 64H480V288H320 256 96V64z"/></svg></span></a><div class=card-body><div class=card-title><a href=/academia/pva-inbre/><h3>Measuring diffusion of protons in polyvinyalginate</h3></a></div><div>31 Jul 2018</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/jonathan-counts/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jonathan Counts</a>
-<a href=/people/james-g.-moberly/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James G. Moberly</a><p class=card-text>Trichloroethylene (TCE) is a toxic and carcinogenic contaminant that presents unique challenges for cleanup because of its density and volatility. Use of microorganisms may be a promising remediation method, however metabolism of TCE results in acid buildup, which consequently impedes the ability of microorganisms to perform this remediation. Polyvinylalginate (PVA) shows promise as a useful shield for microorganisms carrying out bioremediation of TCE by surrounding them in a protective biofilm-like layer, however, key information is missing which relates diffusion of TCE or its metabolic products through PVA.
-<strong><small><a href=/academia/pva-inbre/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2023 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

academia/metagenomics/index.html

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-Websites</a></nav></aside><main><section><h5>Westion Section American Society of Animal Science Annual Meeting: Boise, Idaho</h5><h2>Metagenomic analysis of rumen populations in week-old calves as altered by maternal late gestational nutrition and mode of delivery</h2><h3><small><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/kathy-j.-austin/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kathy J. Austin</a>
-<a href=/people/kristi-m.-cammack/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kristi M. Cammack</a>
-<a href=/people/hannah-c.-cunningham-hollinger/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Hannah C. Cunningham-Hollinger</a></small></h3><h4>June 12, 2019</h4><p>Early colonization of the rumen microbiome is critical to host health and long
-term performance. Factors that influence early colonization include maternal
-factors such as gestational nutrition and mode of delivery. Therefore, we
-hypothesized that late gestational nutrition and mode of delivery would
-influence the calf rumen microbiome. Our objectives were to determine if
-nutrient restriction during late gestation alters the calf rumen microbiome and
-determine if ruminal microbiome composition differs in calves born vaginally
-versus caesarean. Late gestating Angus cows were randomly allocated to one of
-three treatment groups: control (<strong>CON</strong>; n = 6), caesarean section (<strong>CS</strong>; n =
-4), and nutrient restricted (<strong>NR</strong>; n = 5), where CON were fed DDGS and hay to
-meet NRC requirements and calved naturally; CS were fed similarly to CON and
-calves were born via caesarean section; and NR were fed at a level to reduce BCS
-by 1.5-2.0 points over the last trimester compared to CON and calved naturally.
-Rumen fluid was collected via oral lavage prior to partition from cows and at d
-7 from calves. Microbial DNA was isolated from the rumen fluid and metagenomic
-shotgun sequencing was performed using the Illumina HiSeq 2500 platform.
-Sequence data were analyzed using Metaxa2 for taxonomic assignment followed by
-QIIME1 and QIIME2 to determine differential abundance and alpha- and
-beta-diversity differences. There were no significant differences in
-alpha-diversity as measured by shannon index across treatment groups for cows
-(<em>P</em> = 0.239), but there were significant differences for calves (<em>P</em> = 0.015).
-Similarly, there were no significant differences in beta-diversity as measured
-by the bray-curtis dissimilarity matrix for cows (<em>P</em> = 0.059), but there were
-significant differences for calves (<em>P</em> = 0.007). Alpha-diversity differed (<em>P</em>
-&lt; 0.001) between cows and calves, with cows having increased species richness
-compared to calves. Beta-diversity also differed (<em>P</em> = 0.001) between cows and
-calves. At total of 410 taxa were differentially abundant (<em>P</em> &lt; 0.01) between
-cows and calves. These results suggest that the mature rumen microbiome of cows
-is able to withstand changes in feed intake, however the calf microbiome is
-susceptible to alteration by maternal factors. These data also suggest that
-there may be opportunities to develop management strategies during late
-gestation that influence calf health and performance long-term.</p><a href=/academia/metagenomics/metagenomics_analysis_of_rumen_populations.pdf>/academia/metagenomics/metagenomics_analysis_of_rumen_populations.pdf</a>
-<iframe src=/academia/metagenomics/metagenomics_analysis_of_rumen_populations.pdf style=width:100%;height:75vh></iframe></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2019 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

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-Websites</a></nav></aside><main><section><h5>AIChE Annual Meeting: Pittsburgh, Pennsylvania</h5><h2>Measuring Diffusion of Trichlorethylene Breakdown Products in Polyvinylalginate</h2><h3><small><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/samuel-r.-wolfe/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Samuel R. Wolfe</a>
-<a href=/people/jonathan-counts/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jonathan Counts</a>
-<a href=/people/mark-f.-roll/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Mark F. Roll</a>
-<a href=/people/kristopher-v.-waynant/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kristopher v. Waynant</a>
-<a href=/people/james-g.-moberly/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James G. Moberly</a></small></h3><h4>October 29, 2018</h4><p>Trichloroethylene (TCE), a toxic and carcinogenic contaminant, presents unique
-challenges for cleanup because of its water solubility, density, and volatility.
-Bioremediation of TCE is a promising cleanup method; however, metabolism of TCE
-results in acid generation that inhibits remediating microorganisms. Calcium
-alginate(CA)-polyvinylalcohol (PVA) hydrogels show promise for protecting
-remediating microbes, however diffusion of TCE or its byproducts through these
-polymers is unknown. To measure the effective diffusion coefficient of TCE and
-byproducts through hydrogel membranes, we used a modified diaphragm cell.
-Measured effective diffusion coefficient of each species was (cm <sup>2</sup>
-/s
-× 10<sup>6</sup>
-): 14.0 ± 1.91 for H<sup>+</sup>
-ions, 12.4 ± 1.64 for TCE,
-7.83 ± 0.54 for cis-1,2-dichloroethylene (DCE), and 4.68 ± 4.14 for vinyl
-chloride. These results aid in engineering biobeads and suggest that CA-PVA
-hydrogel blends are effective in slowing diffusion of protons, buffering acids
-produced by trichloroethylene metabolism, and remains suitable for encapsulation
-of microorganisms involved in bioremediation.</p><a href=/academia/pva-aiche/measuring_diffusion_of_trichloroethylene.pdf>/academia/pva-aiche/measuring_diffusion_of_trichloroethylene.pdf</a>
-<iframe src=/academia/pva-aiche/measuring_diffusion_of_trichloroethylene.pdf style=width:100%;height:75vh></iframe></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2018 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

academia/pva-inbre/index.html

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-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>Measuring diffusion of protons in polyvinyalginate - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
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-Websites</a></nav></aside><main><section><h5>Idaho INBRE Summer Research Conference: Moscow, Idaho</h5><h2>Measuring diffusion of protons in polyvinyalginate</h2><h3><small><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/jonathan-counts/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jonathan Counts</a>
-<a href=/people/james-g.-moberly/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James G. Moberly</a></small></h3><h4>July 31, 2018</h4><p>Trichloroethylene (TCE) is a toxic and carcinogenic contaminant that presents
-unique challenges for cleanup because of its density and volatility. Use of
-microorganisms may be a promising remediation method, however metabolism of TCE
-results in acid buildup, which consequently impedes the ability of
-microorganisms to perform this remediation. Polyvinylalginate (PVA) shows
-promise as a useful shield for microorganisms carrying out bioremediation of TCE
-by surrounding them in a protective biofilm-like layer, however, key information
-is missing which relates diffusion of TCE or its metabolic products through PVA.
-To measure the effective diffusion coefficient of H<sup>+</sup>
-ions through
-a PVA membrane cross-linked with boric acid and calcium ions, we used a modified
-diaphragm cell. We found the effective diffusion coefficient to be 1.40 ×
-10<sup>-5</sup>
-± 1.91 × 10<sup>-6</sup>
-cm<sup>2</sup>
-s, a nearly
-seven-fold decrease in diffusivity compared to protons in water, with an
-unexpected significant but as of yet unquantified adsorption capacity. These
-results suggest that polyvinylalginate is effective in slowing diffusion of
-protons and buffering these acids produced by trichloroethylene metabolism, and
-remains suitable for encapsulation of microorganisms involved in bioremediation.</p></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2018 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

academia/rotavirus-virome/index.html

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-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>Assessment of Porcine Rotavirus-associated virome variations in pigs with enteric disease - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
-Home
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-Contact
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-Academia
-</a><a href=/videos/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span>
-Videos
-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><section><h5>Veterinary Microbiology</h5><h2>Assessment of Porcine Rotavirus-associated virome variations in pigs with enteric disease</h2><h3><small><a href=/people/tyler-doerksen/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Tyler Doerksen</a>
-<a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/andrea-lu/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Andrea Lu</a>
-<a href=/people/lance-noll/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Lance Noll</a>
-<a href=/people/jianfa-bai/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jianfa Bai</a>
-<a href=/people/jamie-henningson/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jamie Henningson</a>
-<a href=/people/rachel-palinski/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Rachel Palinski</a></small></h3><h4>April 27, 2022</h4><p>Enteric disease is the predominant cause of morbidity and mortality in young
-mammals including pigs. Viral species involved in porcine enteric disease
-complex (PEDC) include rotaviruses, coronaviruses, picornaviruses, astroviruses
-and pestiviruses among others. The virome of three groups of swine samples
-submitted to the Kansas State University Veterinary Diagnostic Laboratory for
-routine testing were assessed, namely, a Rotavirus A positive (RVA) group, a
-Rotavirus co-infection (RV) group and a Rotavirus Negative (RV Neg) group. All
-groups were designated by qRT-PCR results testing for Porcine Rotavirus A, B, C
-and H such that samples positive for RVA only went in the RVA group, samples
-positive for >1 rotavirus went in the RV group and samples negative for all were
-grouped in the RVNeg group. All of the animals had clinical enteric disease
-resulting in scours and swollen joints/lameness, enlarged heart and/or a cough.
-All samples were metagenomic sequenced and analyzed for viral species
-composition that identified 14 viral species and eight bacterial viruses/phages.
-Sapovirus and Escherichia coli phages were found at a high prevalence in RVA and
-RV samples but were found at low or no prevalence in the RV Neg samples.
-Picobirnavirus was identified at a high proportion and prevalence in RV Neg and
-RV samples but at a low prevalence in the RVA group. A sequence analysis of the
-possible host of Picobirnaviruses revealed fungi as the most likely host.
-Non-rotaviral diversity was highest in RVA samples followed by RV then RV Neg
-samples. Various sequences were extracted from the sample reads and a
-phylogenetic update was provided showing a high prevalence of G9 and P[23] RVA
-genotypes. These data are important for pathogen surveillance and control
-measures</p><a href=https://doi.org/10.1016/j.vetmic.2022.109447>https://doi.org/10.1016/j.vetmic.2022.109447</a>
-<iframe src=https://doi.org/10.1016/j.vetmic.2022.109447 style=width:100%;height:75vh></iframe></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2022 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

academia/taxprofiler/index.html

@@ -1,32 +0,0 @@
-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
-Home
-</a><a href=/contact/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M224 0H0V512H384V427l-1.7 1.7-120.1 17.2-11.7 1.9-11.6 1.9-5.3-10.5L222.1 416H209.9l-11.6 23.2-4.4 8.8H184h-8-11.9l-3.4-11.4L144 381l-16.7 55.6L123.9 448H112 80 64V416H80h20.1l20.6-68.6 3.4-11.4H136h16 11.9l3.4 11.4 15.4 51.4 3-5.9 4.4-8.8H2e2h32 9.9l4.4 8.8 7.2 14.5 13.5-94 117-117V160H224V0zm32 0V128H384L256 0zM505 119.8l-41.3 41.3 71 71L576 190.8l-71-71zm-63.9 63.9L299.9 325 288 407.9 370.9 396 512.1 254.7l-71-71z"/></svg></span>
-Contact
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-Websites</a></nav></aside><main><section><h5>bioRxiv</h5><h2>nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling</h2><h3><small><a href=/people/sofia-stamouli/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Sofia Stamouli</a>
-<a href=/people/moritz-e.-beber/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Moritz E. Beber</a>
-<a href=/people/tanja-normark/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Tanja Normark</a>
-<a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/lili-andersson-li/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Lili Andersson-Li</a>
-<a href=/people/maxime-borry/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Maxime Borry</a>
-<a href=/people/mahwash-jamy/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Mahwash Jamy</a>
-<a href=/people/nf-core-community/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Nf-Core Community</a>
-<a href=/people/james-a.-fellows-yate/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James A. Fellows Yate</a></small></h3><h4>October 23, 2023</h4><p>Metagenomic classification tackles the problem of characterising the taxonomic source of all DNA sequencing reads in a sample. A common approach to address the differences and biases between the many different taxonomic classification tools is to run metagenomic data through multiple classification tools and databases. This, however, is a very time-consuming task when performed manually - particularly when combined with the appropriate preprocessing of sequencing reads before the classification. Here we present nf-core/taxprofiler, a highly parallelised read-processing and taxonomic classification pipeline. It is designed for the automated and simultaneous classification and/or profiling of both short- and long-read metagenomic sequencing libraries against a 11 taxonomic classifiers and profilers as well as databases within a single pipeline run. Implemented in Nextflow and as part of the nf-core initiative, the pipeline benefits from high levels of scalability and portability, accommodating from small to extremely large projects on a wide range of computing infrastructure. It has been developed following best-practise software development practises and community support to ensure longevity and adaptability of the pipeline, to help keep it up to date with the field of metagenomics.</p><a href=https://doi.org/10.1101/2023.10.20.563221>https://doi.org/10.1101/2023.10.20.563221</a>
-<iframe src=https://doi.org/10.1101/2023.10.20.563221 style=width:100%;height:75vh></iframe></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2023 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

academia/thesis/index.html

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-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>Polyoxometalate Incorporation and Effects on Proton Transport in Hydrogel Polymers - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
-Home
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-Academia
-</a><a href=/videos/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span>
-Videos
-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><section><h5>University of Idaho: Moscow, Idaho</h5><h2>Polyoxometalate Incorporation and Effects on Proton Transport in Hydrogel Polymers</h2><h3><small><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a></small></h3><h4>August 7, 2020</h4><p>Polyoxometalate clusters embedded into hydrogel biobeads may be able to solve
-the challenges posed by free proton generation during remediation of
-trichloroethylene by acting as buffers and reducing protons to hydrogen gas. In
-this thesis, the challenges posed by systems that contain both diffusion and
-reaction processes for protons are considered mathematically, and a computer
-simulation to was developed to prove the relationship between diaphragm cell lag
-period and reactive capabilities of membranes. Two polyoxometalate compounds,
-sodium decavanadate and alumina sulfate, were successfully incorporated into a
-poly(vinyl alcohol) hydrogel membrane, and the diffusivity changes associated
-with each compound was determined. It was found that the diffusivity of protons
-through an unmodified 10% w/v poly(vinyl alcohol) membrane was 1.76 ×
-10<sup>-5</sup>
-cm<sup>2</sup>
-s<sup>-1</sup>
-, the diffusivity through a
-10%/2% w/w/v poly(vinyl alcohol)/sodium decavanadate membrane was 3.10 ×
-10<sup>-6</sup>
-cm<sup>2</sup>
-s<sup>-1</sup>
-, and the diffusivity through a
-10%/2% w/w/v poly(vinyl alcohol)/alumina sulfate membrane was 3.32 ×
-10<sup>-7</sup>
-cm<sup>2</sup>
-s<sup>-1</sup>
-. Through analysis of the
-diaphragm cell lag period, it was found the incorporation of sodium decavanadate
-did not increase the reactivity of a poly(vinyl alcohol) hydrogel, and
-incorporation of alumina sulfate lowered the reactivity. These results indicate
-that polyoxometalate integration into hydrogel membranes is feasible, but does
-not provide any advantage to a bioremediation scenario.</p><a href=https://www.proquest.com/dissertations-theses/polyoxometalate-incorporation-effects-on-proton/docview/2502214356/se-2>https://www.proquest.com/dissertations-theses/polyoxometalate-incorporation-effects-on-proton/docview/2502214356/se-2</a>
-<iframe src=https://www.proquest.com/dissertations-theses/polyoxometalate-incorporation-effects-on-proton/docview/2502214356/se-2 style=width:100%;height:75vh></iframe></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2020 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

ai/index.html

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-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><meta name=description content="Advertising page to try and sell my artificial insemination services"><title>Artificial Insemination - MillironX</title><link href="/styles/mix-twbs.min.css" rel=stylesheet></head><body><div class=container-fluid><div class="row wrapper min-vh-100 flex-column flex-sm-row"><aside class="col-12 col-md-3 p-0 bg-dark flex-shrink-1"><nav class="navbar navbar-expand-md navbar-dark bg-dark align-items-start flex-md-column flex-row"><div class=container-fluid><a class="navbar-brand d-block d-md-none" href=#><object class="d-inline-block align-text-top" width=80 height=24 style=filter:invert(100%) data=/graphics/millironx.svg>
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-&emsp; Milliron X</h1></header></div><div class=blurred-container><div class=motto><h1 id=motto>Artificial Insemination</h1></div><div class=img-src style=background-image:url(/images/Ai-calf.jpg)></div><div class="img-src blur" style=background-image:url(/images/Ai-calf_hu1143faa57f5b1acd11a97eda612b56ee_469394_filter_6742909828560968691.jpg)></div></div><br><section class="container-fluid list-main"><div class="container px-5"><section itemscope itemtype=http://schema.org/Product><h2 itemprop=name>Cattle artificial insemination services</h2><p>I am licensed in the Great State of Wyoming as a food animal artificial
-insemination technician. I only offer AI services for cows, even though
-legally I <em>could</em> AI cows, goats, and sheep. My services are most
-readily available in the southeast Wyoming area or the Flint Hills of Kansas
-depending on the time of year.</p><h3>Rate schedule</h3><div itemprop=offers itemscope itemtype=http://schema.org/Offer><table itemprop=priceSpecification itemscope itemtype=http://schema.org/CompoundPriceSpecification class="table table-responsive table-striped"><meta itemprop=price content="25.00"><meta itemprop=priceCurrency content="USD"><tr itemprop=priceComponent itemscope itemtype=http://schema.org/UnitPriceSpecification><th>Insemination</th><td><small>(per cow)</small></td><td><span itemprop=priceCurrency content="USD">$</span><span itemprop=price>25.00</span></td><td><small>5 cow minimum charge</small></td></tr><tr itemprop=priceComponent itemscope itemtype=http://schema.org/UnitPriceSpecification><th>Milage</th><td><small>(per mile, one-way)</small></td><td><span itemprop=priceCurrency content="USD">$</span><span itemprop=price>1.05</span></td><td><small>2.5 mile minimum charge</small></td></tr></table></div><p>I will provide all equipment <strong>except</strong> semen storage (liquid
-nitrogen tank) and cattle handling (i.e., squeeze chute).</p><p>To get started, <a href=/contact>contact me</a>, and select the "I'm
-hiring for artificial insemination" option.</p></section></div><div class=row data-masonry='{"percentPosition": true}'></div></section><footer class=fixed-bottom><div class="container-fluid footer-contents"><div class="row justify-content-between"><div class="col-3 align-self-center"><img src=/graphics/brandedbull.min.svg height=95rem></div><div class="col-3 align-self-center"><div class="btn-group float-end" role=group aria-label="Other Milliron X sites"><a class="btn btn-outline-primary btn-sm" href=https://video.millironx.com/ data-bs-toggle=tooltip title="Video (Peertube)"><i class="fax fa-peertube fa-fw"></i></a>
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+cardImage: library
+draft: true
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+tags:
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+  - profound
+type: "Journal Article"
+authors:
+  - Christensen, Thomas Allen, II
+link: 'https://dx.doi.org/...'
+journal: "Journal of Hard Knocks"
+location: "Life"
+awards:
+  - 'Everything is Awesome 2020'
+---
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+       d="m 205,497.3622 h 20 c 1.59641,0 3.22706,-0.0728 4.71101,-0.66135 1.48394,-0.58857 2.74536,-1.65633 3.71836,-2.92194 0.973,-1.26562 1.6829,-2.71578 2.64135,-3.99245 0.47923,-0.63833 1.02956,-1.23277 1.69028,-1.68064 0.66071,-0.44787 1.4408,-0.74362 2.239,-0.74362 0.7982,0 1.57829,0.29575 2.239,0.74362 0.66072,0.44787 1.21105,1.04231 1.69028,1.68064 0.95845,1.27667 1.66835,2.72683 2.64135,3.99245 0.973,1.26561 2.23442,2.33337 3.71836,2.92194 1.48395,0.58857 3.1146,0.66135 4.71101,0.66135 h 20"
+       id="path4152"
+       inkscape:path-effect="#path-effect4154"
+       inkscape:original-d="m 205,497.3622 h 20 c 5,0 8.99075,-10 15,-10 6.00925,0 10,10 15,10 h 20"
+       inkscape:connector-curvature="0"
+       sodipodi:nodetypes="csssc"
+       transform="translate(1.2499871,-12.187492)" />
+    <path
+       style="fill:none;fill-rule:evenodd;stroke:#000000;stroke-width:6;stroke-linecap:round;stroke-linejoin:round;stroke-miterlimit:4;stroke-dasharray:none;stroke-opacity:1"
+       d="m 285,497.3622 20,-25"
+       id="path4156"
+       inkscape:connector-curvature="0"
+       sodipodi:nodetypes="cc" />
+    <path
+       style="fill:none;fill-rule:evenodd;stroke:#000000;stroke-width:6;stroke-linecap:round;stroke-linejoin:round;stroke-miterlimit:4;stroke-dasharray:none;stroke-opacity:1"
+       d="m 285,472.3622 20,25"
+       id="path4158"
+       inkscape:connector-curvature="0"
+       sodipodi:nodetypes="cc" />
+    <!--    <text
+               xml:space="preserve"
+               style="font-style:normal;font-weight:normal;font-size:48.38618469px;line-height:125%;font-family:sans-serif;letter-spacing:0px;word-spacing:0px;fill:#000000;fill-opacity:1;stroke:none;stroke-width:1px;stroke-linecap:butt;stroke-linejoin:miter;stroke-opacity:1"
+               x="166.61456"
+               y="617.31299"
+               id="text3346"
+               sodipodi:linespacing="125%"
+               transform="scale(1.2096546,0.82668227)"><tspan
+                 sodipodi:role="line"
+                 id="tspan3348"
+                 x="166.61456"
+                 y="617.31299"
+                 style="font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;font-size:14.14374161px;font-family:Garamond;-inkscape-font-specification:'Garamond Bold'">MILLIRON X</tspan></text>
+          -->
+  </g>
+</svg>

assets/scripts/fa-icons.js

@@ -0,0 +1,123 @@
+import { library, icon, config, dom } from "@fortawesome/fontawesome-svg-core";
+import {
+  faBook,
+  faBrowser,
+  faComment,
+  faCowbell,
+  faEllipsis,
+  faFileAlt,
+  faFileSignature,
+  faGlobe,
+  faGraduationCap,
+  faHome,
+  faNotebook,
+  faPodium,
+  faPresentation,
+  faTag,
+  faScaleBalanced,
+  faUniversity,
+  faUser,
+  faUserAstronaut,
+  faVideo,
+  faW,
+} from "./pro-duotone-svg-icons/index.mjs";
+import {
+  faDiscord,
+  faGithub,
+  faGitlab,
+  faGolang,
+  faHtml5,
+  faOrcid,
+  faStackOverflow,
+  faSteam,
+  faVimeo,
+} from "@fortawesome/free-brands-svg-icons";
+
+config.familyDefault = "duotone";
+config.styleDefault = "duotone";
+
+const faBullSperm = {
+  prefix: "fax",
+  iconName: "bull-sperm",
+  icon: [
+    512,
+    512,
+    [],
+    null,
+    "M96 32c-6.691.363-12.375 4.062-15.375 7.062l-64 64c-12.8 12.8-5.333 26.667 0 32l96 64c10.3 10.301 22.938 4.887 37.563-7.812 8.635 9.735 16.63 18.38 23.125 24.875 8.33 8.33 23.436 16.284 41.75 24.313 18.313 8.028 39.82 16.065 60.812 24.062 20.992 7.997 41.474 15.986 57.625 23.938 16.15 7.95 27.882 16.013 31.5 23.25 6.52 13.038 26.468 44.939 48.875 79.75 22.32 34.674 46.99 72.043 63 96.062.02.029.042.096.064.125.045.064.144.185.189.25l2.812-1.5c-10.685-26.697-28.285-68.26-46.44-106.437-18.155-38.179-36.666-72.792-49.937-86.063-16.566-16.566-56.5-32.375-96.5-48.375s-80.066-32.19-95.5-47.625c-6.45-6.45-14.409-15.11-23.063-24.875 12.926-14.779 18.51-27.552 8.125-37.938-16-26.666-51.2-83.2-64-96-5.6-5.6-11.42-7.345-16.625-7.062zm372.688 436.75c.201.487.488 1.079.687 1.563-.291-.44-.644-.995-.937-1.438.023-.012.06.001.064 0 .002 0 .185-.06.188-.064.002-.001-.011-.038 0-.064z",
+  ],
+};
+
+const faPeertube = {
+  prefix: "fax",
+  iconName: "peertube",
+  icon: [
+    512,
+    512,
+    [],
+    null,
+    "M55.8 25V255L255 140zM255 140v230l199.2-115zM55.8 255v230L255 370z",
+  ],
+};
+
+const faGitea = {
+  prefix: "fax",
+  iconName: "gitea",
+  icon: [
+    512,
+    512,
+    [],
+    null,
+    "M92.7 114.5c-5.2 0-11 .4-17.6 1.9c-7 1.4-26.8 5.9-43 21.5C-3.9 169.9 5.3 221 6.4 228.6c1.4 9.4 5.5 35.4 25.4 58c36.6 44.9 115.5 43.8 115.5 43.8s9.7 23.1 24.5 44.4c20 26.5 40.6 47.1 60.6 49.6c50.4 0 151.1-.1 151.1-.1s9.6 .1 22.6-8.2c11.2-6.8 21.2-18.7 21.2-18.7s10.3-11 24.7-36.2c4.4-7.8 8.1-15.3 11.3-22.4c0 0 44.2-93.7 44.2-184.9c-.9-27.6-7.7-32.5-9.3-34.1c-3.3-3.3-7.7-3.2-7.7-3.2s-93.8 5.3-142.3 6.4c-10.6 .2-21.2 .5-31.7 .6l0 93.8c-4.4-2.1-8.9-4.2-13.3-6.3c0-29.1-.1-87.4-.1-87.4c-23.2 .3-71.4-1.8-71.4-1.8s-113.1-5.7-125.4-6.8c-3.9-.2-8.4-.7-13.6-.7zm9.8 38.4s5.7 47.5 12.6 75.4c5.8 23.4 19.8 62.2 19.8 62.2s-20.9-2.5-34.4-7.3c-20.7-6.8-29.5-15-29.5-15s-15.3-10.7-23-31.8c-13.2-35.4-1.1-57-1.1-57s6.7-18 30.8-24c11-3 24.8-2.5 24.8-2.5zm171 53.5c5.9-.4 11.9 2.6 11.9 2.6l18.2 8.8c-3.7 7.5-7.4 15-11.1 22.5c-5.4-.1-10.3 2.8-12.9 7.5c-2.7 5-2.2 11.3 1.5 15.8l-19.7 40.3c-6.6 .1-12.3 4.6-13.8 11s1.6 13 7.3 16c6.2 3.2 14 1.4 18.2-4.3c4.1-5.7 3.4-13.5-1.4-18.5L290.8 269c1.2 .1 3 .2 5-.4c3.3-.7 5.7-2.9 5.7-2.9c3.4 1.4 6.9 3 10.6 4.9c3.8 1.9 7.4 3.9 10.7 5.8c.7 .4 1.4 .9 2.2 1.5c1.3 1 2.7 2.5 3.8 4.4c1.5 4.4-1.5 11.9-1.5 11.9c-1.8 6.1-14.7 32.5-14.7 32.5c-6.5-.2-12.2 4-14.2 10c-2.1 6.5 .9 13.8 7.1 17s13.9 1.4 18-4.2c4-5.4 3.7-13-.9-18.1c1.5-3 3-5.9 4.5-9c4-8.3 10.8-24.3 10.8-24.3c.7-1.4 4.6-8.2 2.2-17c-2-9.1-10.1-13.4-10.1-13.4c-9.8-6.3-23.4-12.2-23.4-12.2s0-3.3-.9-5.7c-.9-2.5-2.2-4.1-3.1-5c3.6-7.4 7.2-14.8 10.8-22.2L373.9 252s10.1 4.6 12.2 13c1.5 5.9-.4 11.2-1.4 13.8c-5 12.3-44 90.5-44 90.5s-4.9 11.6-15.7 12.3c-4.6 .3-8.2-1-8.2-1s-.2-.1-4.2-1.7l-90.3-44s-8.7-4.6-10.2-12.5c-1.8-6.5 2.2-14.5 2.2-14.5l43.4-89.5s3.8-7.8 9.8-10.4c.5-.2 1.8-.8 3.6-1.2c.8-.2 1.6-.3 2.5-.4z",
+  ],
+};
+
+const faNextcloud = {
+  prefix: "fax",
+  iconName: "nextcloud",
+  icon: [
+    733,
+    512,
+    [],
+    null,
+    "m365.6 114.3c-65 0-120.1 44.1-137.2 103.8c-14.8-31.7-47-53.8-84-53.8c-50.9 0-92.8 41.9-92.8 92.8s41.9 92.8 92.8 92.8c37 0 69.2-22.2 84-53.9c17.1 59.7 72.2 103.8 137.2 103.8c64.5 0 119.3-43.4 136.8-102.4c15.1 31 46.9 52.5 83.4 52.5c50.9 0 92.8-41.9 92.8-92.8s-41.9-92.8-92.8-92.8c-36.5 0-68.3 21.6-83.4 52.5c-17.1-59-71.9-102.4-136.4-102.4zm0 54.5c49.1 0 88.3 39.2 88.3 88.2s-39.2 88.3-88.3 88.3s-88.2-39.2-88.2-88.3s39.2-88.2 88.2-88.2zm-221.2 49.9c21.5 0 38.3 16.8 38.3 38.3s-16.9 38.3-38.3 38.3s-38.3-16.9-38.3-38.3s16.8-38.3 38.3-38.3zm441.4 0c21.5 0 38.3 16.8 38.3 38.3s-16.9 38.3-38.3 38.3s-38.3-16.9-38.3-38.3s16.8-38.3 38.3-38.3z",
+  ],
+};
+
+library.add(
+  faBook,
+  faBrowser,
+  faBullSperm,
+  faComment,
+  faCowbell,
+  faDiscord,
+  faEllipsis,
+  faFileAlt,
+  faFileSignature,
+  faGitea,
+  faGithub,
+  faGitlab,
+  faGlobe,
+  faGolang,
+  faGraduationCap,
+  faHome,
+  faHtml5,
+  faNextcloud,
+  faNotebook,
+  faOrcid,
+  faPeertube,
+  faPodium,
+  faPresentation,
+  faTag,
+  faScaleBalanced,
+  faStackOverflow,
+  faSteam,
+  faUniversity,
+  faUser,
+  faUserAstronaut,
+  faVideo,
+  faVimeo,
+  faW
+);
+
+dom.i2svg();

assets/scripts/phone-masking.js

@@ -0,0 +1 @@
+$("#phone").mask("(000) 000-0000");

assets/scripts/scroll-effect.js

@@ -0,0 +1,5 @@
+$(window).scroll(function (e) {
+  oVal = $(window).scrollTop() / 170;
+  $(".blur").css("opacity", oVal);
+});
+$("#motto").fitText();

assets/scripts/tooltip-enable.js

@@ -0,0 +1,6 @@
+var tooltipTriggerList = [].slice.call(
+  document.querySelectorAll('[data-bs-toggle="tooltip"]')
+);
+var tooltipList = tooltipTriggerList.map(function (tooltipTriggerEl) {
+  return new bootstrap.Tooltip(tooltipTriggerEl);
+});

assets/styles/mix-twbs.scss

@@ -0,0 +1,183 @@
+$web-font-path: "/fonts/nunito-sans/index.css";
+
+@import "bootstrap/functions";
+@import "bootswatch/lux/variables";
+@import "bootstrap/bootstrap";
+@import "bootswatch/lux/bootswatch";
+
+$peek-height: 25rem;
+
+.blurred-container {
+  position: relative;
+  width: 100%;
+  min-height: 35vh;
+  height: $peek-height;
+  top: 0;
+  left: 0;
+}
+
+.blurred-container .motto {
+  color: #fff;
+  font-size: 76px;
+  font-weight: 600;
+  text-align: center;
+  text-shadow: 0 0 10px rgba(0, 0, 0, 0.33);
+  text-transform: uppercase;
+  top: 7.5vh;
+  z-index: 3;
+  display: block;
+  margin: 0 auto;
+  position: relative;
+  width: 60%;
+  height: 0;
+}
+
+.motto h1 {
+  background: #0000007d;
+  -webkit-text-stroke: 0.3px $gray-100;
+  line-height: 1;
+}
+
+.blurred-container .img-src {
+  position: fixed;
+  width: 100%;
+  min-height: 35vh;
+  height: $peek-height;
+  background-repeat: no-repeat;
+  background-size: cover;
+  background-position: center center;
+}
+
+.blur {
+  opacity: 0;
+}
+
+.list-main {
+  position: relative;
+  background-color: #fff;
+  padding-bottom: calc(1rem + 95px);
+  padding-top: 1rem;
+}
+
+.footer-contents {
+  position: relative;
+  background-color: $gray-200;
+}
+
+/* Gives me greater control over fonts */
+.font-serif {
+  font-family: Georgia, "Times New Roman", Times, serif;
+}
+
+.font-sans {
+  font-family: "Open Sans", "Helvetica Neue", Helvetica, Arial, sans-serif;
+}
+
+.font-mono {
+  font-family: Menlo, Monaco, Consolas, "Courier New", monospace;
+}
+
+.font-small-caps {
+  font-variant-caps: small-caps;
+}
+
+.strikethrough {
+  text-decoration: line-through;
+}
+
+.sfTable {
+  margin: 0 auto;
+}
+
+.text-align-left {
+  text-align: left;
+}
+
+.text-align-right {
+  text-align: right;
+}
+
+.float-left {
+  float: left;
+}
+
+.float-right {
+  float: right;
+}
+
+.media-object {
+  max-height: 100%;
+  max-width: 100%;
+}
+
+@media (min-width: 768px) {
+  .pull-left {
+    max-width: 25%;
+  }
+
+  .w-md-50 {
+    width: 50%;
+  }
+}
+
+h1 small {
+  font-size: 60%;
+  color: #9a9a9a;
+  font-weight: 300;
+  line-height: 1.5;
+}
+
+h1 {
+  font-weight: 400;
+  margin: 30px 0 15px;
+}
+
+.dogear {
+  clip-path: polygon(0 0, 0 100%, 100% 100%, 100% 25%, 75% 0);
+}
+
+.fa-stack-top {
+  vertical-align: top;
+}
+
+.table-condensed th {
+  padding: 0.5rem;
+}
+
+.table-condensed td {
+  padding: 0.5rem;
+}
+
+@media (min-width: map-get($grid-breakpoints, md)) {
+  .fixed-bottom {
+    left: 25%;
+  }
+
+  .md-max-width-33 {
+    max-width: 33%;
+  }
+}
+
+.card-link {
+  white-space: nowrap;
+}
+
+.category-button {
+  position: absolute;
+  top: 1em;
+  right: 1em;
+  display: grid;
+}
+
+.card-title {
+  margin-right: 2.25em;
+}
+
+.thumb-icon-wrapper {
+  display: flex;
+  justify-content: center;
+}
+
+.thumb-icon-badge {
+  font-size: xx-large;
+}

categories/index.html

@@ -1,13 +0,0 @@
-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><title>Categories - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
-Home
-</a><a href=/contact/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M224 0H0V512H384V427l-1.7 1.7-120.1 17.2-11.7 1.9-11.6 1.9-5.3-10.5L222.1 416H209.9l-11.6 23.2-4.4 8.8H184h-8-11.9l-3.4-11.4L144 381l-16.7 55.6L123.9 448H112 80 64V416H80h20.1l20.6-68.6 3.4-11.4H136h16 11.9l3.4 11.4 15.4 51.4 3-5.9 4.4-8.8H2e2h32 9.9l4.4 8.8 7.2 14.5 13.5-94 117-117V160H224V0zm32 0V128H384L256 0zM505 119.8l-41.3 41.3 71 71L576 190.8l-71-71zm-63.9 63.9L299.9 325 288 407.9 370.9 396 512.1 254.7l-71-71z"/></svg></span>
-Contact
-</a><a href=/academia/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 144 256 0 512 144v48H0V144zM0 512V464l64-48V224h64V416h40V224h64V416h48V224h64V416h40V224h64V416l64 48v48H0zM256 144a32 32 0 100-64 32 32 0 100 64z"/></svg></span>
-Academia
-</a><a href=/videos/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span>
-Videos
-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><style>.motto::before{background-image:url(/images/saddles_hu1143faa57f5b1acd11a97eda612b56ee_388130_6000x2000_fill_q75_box_center.jpg)}</style><div class=motto title><div class=motto-inside><h1 id=motto>Categories</h1></div></div><section><div></div><div class=card><div class=card-body><div class=card-title><a href=/categories/paper/><h3>Paper</h3></a></div><div>23 Oct 2023</div><p class=card-text><strong><small><a href=/categories/paper/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><div class=card-body><div class=card-title><a href=/categories/web/><h3>Web</h3></a></div><div>01 Mar 2022</div><p class=card-text><strong><small><a href=/categories/web/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><div class=card-body><div class=card-title><a href=/categories/thesis/><h3>Thesis</h3></a></div><div>07 Aug 2020</div><p class=card-text><strong><small><a href=/categories/thesis/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><div class=card-body><div class=card-title><a href=/categories/poster/><h3>Poster</h3></a></div><div>12 Jun 2019</div><p class=card-text><strong><small><a href=/categories/poster/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><div class=card-body><div class=card-title><a href=/categories/presentation/><h3>Presentation</h3></a></div><div>01 Aug 2018</div><p class=card-text><strong><small><a href=/categories/presentation/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><div class=card-body><div class=card-title><a href=/categories/video/><h3>Video</h3></a></div><div>16 Feb 2017</div><p class=card-text><strong><small><a href=/categories/video/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2023 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

categories/index.xml

@@ -1 +0,0 @@
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categories/paper/index.html

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-Thomas A. Christensen II</a>
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-James A. Fellows Yate</a><p class=card-text>Metagenomic classification tackles the problem of characterising the taxonomic source of all DNA sequencing reads in a sample. A common approach to address the differences and biases between the many different taxonomic classification tools is to run metagenomic data through multiple classification tools and databases. This, however, is a very time-consuming task when performed manually - particularly when combined with the appropriate preprocessing of sequencing reads before the classification. Here we present nf-core/taxprofiler, a highly parallelised read-processing and taxonomic classification pipeline.
-<strong><small><a href=https://doi.org/10.1101/2023.10.20.563221>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/genomics/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Genomics</a></div></div></div><div class=card><a class=category-button href=/categories/paper/ title=Paper><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M96 0C43 0 0 43 0 96V416c0 53 43 96 96 96H384h32 32V448H416V384h32V0H416 384 96zm0 384H352v64H96c-17.7.0-32-14.3-32-32s14.3-32 32-32zm32-256H352v32H128V128zm224 64v32H128V192H352z"/></svg></span></a><div class=card-body><div class=card-title><a href=https://doi.org/10.1021/acsestengg.2c00107><h3>Investigation of Hydronium Diffusion in Poly(vinyl alcohol) Hydrogels: A Critical First Step to Describe Acid Transport for Encapsulated Bioremediation</h3></a></div><div>02 Sep 2022</div><a href=/people/carson-j.-silsby/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
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-Jonathan R. Counts</a>
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-Thomas A. Christensen II</a>
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-Mark F. Roll</a>
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-Kristopher v. Waynant</a>
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-James G. Moberly</a><p class=card-text>Bioremediation of chlorinated aliphatic hydrocarbon-contaminated aquifers can be hindered by high contaminant concentrations and acids generated during remediation. Encapsulating microbes in hydrogels may provide a protective, tunable environment from inhibiting compounds; however, current approaches to formulate successful encapsulated systems rely on trial and error rather than engineering approaches because fundamental information on mass-transfer coefficients is lacking. To address this knowledge gap, hydronium ion mass-transfer rates through two commonly used hydrogel materials, poly(vinyl alcohol) and alginic acid, under two solidification methods (chemical and cryogenic) were measured.
-<strong><small><a href=https://doi.org/10.1021/acsestengg.2c00107>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/diffusion/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Diffusion</a>
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-Hydrogels</a>
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-Transport Properties</a></div></div></div><div class=card><a class=category-button href=/categories/paper/ title=Paper><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M96 0C43 0 0 43 0 96V416c0 53 43 96 96 96H384h32 32V448H416V384h32V0H416 384 96zm0 384H352v64H96c-17.7.0-32-14.3-32-32s14.3-32 32-32zm32-256H352v32H128V128zm224 64v32H128V192H352z"/></svg></span></a><div class=card-body><div class=card-title><a href=https://doi.org/10.1016/j.vetmic.2022.109447><h3>Assessment of Porcine Rotavirus-associated virome variations in pigs with enteric disease</h3></a></div><div>27 Apr 2022</div><a href=/people/tyler-doerksen/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Tyler Doerksen</a>
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-Thomas A. Christensen II</a>
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-Rachel Palinski</a><p class=card-text>Enteric disease is the predominant cause of morbidity and mortality in young mammals including pigs. Viral species involved in porcine enteric disease complex (PEDC) include rotaviruses, coronaviruses, picornaviruses, astroviruses and pestiviruses among others. The virome of three groups of swine samples submitted to the Kansas State University Veterinary Diagnostic Laboratory for routine testing were assessed, namely, a Rotavirus A positive (RVA) group, a Rotavirus co-infection (RV) group and a Rotavirus Negative (RV Neg) group.
-<strong><small><a href=https://doi.org/10.1016/j.vetmic.2022.109447>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/porcine-rotavirus/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Porcine Rotavirus</a>
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-Rotavirus</a></div></div></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2023 Thomas A. Christensen II<br>Licensed
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-Websites</a></nav></aside><main><style>.motto::before{background-image:url(/images/saddles_hu1143faa57f5b1acd11a97eda612b56ee_388130_6000x2000_fill_q75_box_center.jpg)}</style><div class=motto title><div class=motto-inside><h1 id=motto>Poster</h1></div></div><section><div></div><div class=card><a class=category-button href=/categories/poster/ title=Poster><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M32 0H0V64H32V320v32H64 256v34.7l-54.6 54.6L178.7 464 224 509.3l22.6-22.6L288 445.3l41.4 41.4L352 509.3 397.3 464l-22.6-22.6L320 386.7V352H512h32V320 64h32V0H544 480 96 32zM96 64H480V288H320 256 96V64z"/></svg></span></a><div class=card-body><div class=card-title><a href=/academia/metagenomics/metagenomics_analysis_of_rumen_populations.pdf><h3>Metagenomic analysis of rumen populations in week-old calves as altered by maternal late gestational nutrition and mode of delivery</h3></a></div><div>12 Jun 2019</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/kathy-j.-austin/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Kathy J. Austin</a>
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-Kristi M. Cammack</a>
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-Hannah C. Cunningham-Hollinger</a><p class=card-text>Early colonization of the rumen microbiome is critical to host health and long term performance. Factors that influence early colonization include maternal factors such as gestational nutrition and mode of delivery. Therefore, we hypothesized that late gestational nutrition and mode of delivery would influence the calf rumen microbiome. Our objectives were to determine if nutrient restriction during late gestation alters the calf rumen microbiome and determine if ruminal microbiome composition differs in calves born vaginally versus caesarean.
-<strong><small><a href=/academia/metagenomics/metagenomics_analysis_of_rumen_populations.pdf>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/gestation/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Gestation</a>
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-Metagenomics</a>
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-Microbiome</a>
-<a href=/tags/rumen/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Rumen</a></div></div></div><div class=card><a class=category-button href=/categories/poster/ title=Poster><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M32 0H0V64H32V320v32H64 256v34.7l-54.6 54.6L178.7 464 224 509.3l22.6-22.6L288 445.3l41.4 41.4L352 509.3 397.3 464l-22.6-22.6L320 386.7V352H512h32V320 64h32V0H544 480 96 32zM96 64H480V288H320 256 96V64z"/></svg></span></a><div class=card-body><div class=card-title><a href=/academia/pva-aiche/measuring_diffusion_of_trichloroethylene.pdf><h3>Measuring Diffusion of Trichlorethylene Breakdown Products in Polyvinylalginate</h3></a></div><div>29 Oct 2018</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/samuel-r.-wolfe/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Samuel R. Wolfe</a>
-<a href=/people/jonathan-counts/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jonathan Counts</a>
-<a href=/people/mark-f.-roll/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Mark F. Roll</a>
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-Kristopher v. Waynant</a>
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-James G. Moberly</a><p class=card-text>Trichloroethylene (TCE), a toxic and carcinogenic contaminant, presents unique challenges for cleanup because of its water solubility, density, and volatility. Bioremediation of TCE is a promising cleanup method; however, metabolism of TCE results in acid generation that inhibits remediating microorganisms. Calcium alginate(CA)-polyvinylalcohol (PVA) hydrogels show promise for protecting remediating microbes, however diffusion of TCE or its byproducts through these polymers is unknown. To measure the effective diffusion coefficient of TCE and byproducts through hydrogel membranes, we used a modified diaphragm cell.
-<strong><small><a href=/academia/pva-aiche/measuring_diffusion_of_trichloroethylene.pdf>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/bioremediation/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
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-Proton Transport</a>
-<a href=/tags/chemical-engineering/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Chemical Engineering</a></div></div></div><div class=card><a class=category-button href=/categories/poster/ title=Poster><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M32 0H0V64H32V320v32H64 256v34.7l-54.6 54.6L178.7 464 224 509.3l22.6-22.6L288 445.3l41.4 41.4L352 509.3 397.3 464l-22.6-22.6L320 386.7V352H512h32V320 64h32V0H544 480 96 32zM96 64H480V288H320 256 96V64z"/></svg></span></a><div class=card-body><div class=card-title><a href=/academia/pva-inbre/><h3>Measuring diffusion of protons in polyvinyalginate</h3></a></div><div>31 Jul 2018</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a>
-<a href=/people/jonathan-counts/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Jonathan Counts</a>
-<a href=/people/james-g.-moberly/ class=card-link><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-James G. Moberly</a><p class=card-text>Trichloroethylene (TCE) is a toxic and carcinogenic contaminant that presents unique challenges for cleanup because of its density and volatility. Use of microorganisms may be a promising remediation method, however metabolism of TCE results in acid buildup, which consequently impedes the ability of microorganisms to perform this remediation. Polyvinylalginate (PVA) shows promise as a useful shield for microorganisms carrying out bioremediation of TCE by surrounding them in a protective biofilm-like layer, however, key information is missing which relates diffusion of TCE or its metabolic products through PVA.
-<strong><small><a href=/academia/pva-inbre/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2019 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

categories/poster/index.xml

@@ -1 +0,0 @@
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categories/presentation/index.html

@@ -1,15 +0,0 @@
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-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a><p class=card-text><strong><small><a href=/academia/how-to-build-a-cow-cud-fuel-cell/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2018 Thomas A. Christensen II<br>Licensed
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-Websites</a></nav></aside><main><style>.motto::before{background-image:url(/images/saddles_hu1143faa57f5b1acd11a97eda612b56ee_388130_6000x2000_fill_q75_box_center.jpg)}</style><div class=motto title><div class=motto-inside><h1 id=motto>Thesis</h1></div></div><section><div></div><div class=card><a class=category-button href=/categories/thesis/ title=Thesis><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 640 512"><path d="M640 176 320 288 127.8 220.7l198.1-77.8 14.9-5.9L329 107.3l-14.9 5.9-224 88-8.7 3.4L80 204V346.8c15.4 25.1 27.8 68.4.0 133.2L0 464s32.5-46.5 48-96.9V192.8L0 176V144L320 32 640 144v32zM143.6 260.2l165.9 58.1 10.6 3.7 10.6-3.7 165.9-58.1L512 408c0 35.3-86 72-192 72s-192-36.7-192-72l15.6-147.8z"/></svg></span></a><div class=card-body><div class=card-title><a href=https://www.proquest.com/dissertations-theses/polyoxometalate-incorporation-effects-on-proton/docview/2502214356/se-2><h3>Polyoxometalate Incorporation and Effects on Proton Transport in Hydrogel Polymers</h3></a></div><div>07 Aug 2020</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a><p class=card-text>Polyoxometalate clusters embedded into hydrogel biobeads may be able to solve the challenges posed by free proton generation during remediation of trichloroethylene by acting as buffers and reducing protons to hydrogen gas. In this thesis, the challenges posed by systems that contain both diffusion and reaction processes for protons are considered mathematically, and a computer simulation to was developed to prove the relationship between diaphragm cell lag period and reactive capabilities of membranes.
-<strong><small><a href=https://www.proquest.com/dissertations-theses/polyoxometalate-incorporation-effects-on-proton/docview/2502214356/se-2>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/bioremediation/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Bioremediation</a>
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-Polyoxometalate</a>
-<a href=/tags/hydrogel-polymers/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Hydrogel Polymers</a>
-<a href=/tags/proton-transport/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Proton Transport</a>
-<a href=/tags/chemical-engineering/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Chemical Engineering</a></div></div></div><div class=card><a class=category-button href=/categories/thesis/ title=Thesis><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 640 512"><path d="M640 176 320 288 127.8 220.7l198.1-77.8 14.9-5.9L329 107.3l-14.9 5.9-224 88-8.7 3.4L80 204V346.8c15.4 25.1 27.8 68.4.0 133.2L0 464s32.5-46.5 48-96.9V192.8L0 176V144L320 32 640 144v32zM143.6 260.2l165.9 58.1 10.6 3.7 10.6-3.7 165.9-58.1L512 408c0 35.3-86 72-192 72s-192-36.7-192-72l15.6-147.8z"/></svg></span></a><div class=card-header><img class=img-thumbnail src=/academia/cheme-car/thumbnail_hua27ceb9f6c1a8b01057b70de792ffbc6_1566619_600x0_resize_q75_box.jpg alt="Thumbnail of thumbnail.jpg"></div><div class=card-body><div class=card-title><a href=https://doi.org/10.15786/13700938.v1><h3>The ChemE Car that Cud: AIChE ChemE Car Engineering Design Proposal</h3></a></div><div>14 May 2019</div><a href=/people/thomas-a.-christensen-ii/ class="card-link
-bolder"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M224 256A128 128 0 10224 0a128 128 0 100 256zM448 512 384 304H64L0 512H448z"/></svg></span>
-Thomas A. Christensen II</a><p class=card-text>The ChemE Car That Cud showcases Wyoming&rsquo;s dominant industries of agriculture and mining by utilizing rumen fluid from a cannulated beef cow to generate hydrogen to be used in a hydrogen fuel cell and radioactive cesium, a byproduct of uranium that is often obtained from Wyoming&rsquo;s mines, to time the car&rsquo;s stop. The concentration of cesium-137 source is measured using the radioactive decay of cesium shielded by aluminum. The painted aluminum chassis was obtained from a previous team at UW, and modified using plastic k&rsquo;nex toys to adapt to the current power source and stopping mechanism.
-<strong><small><a href=https://doi.org/10.15786/13700938.v1>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer><a href=/tags/chemical-engineering/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Chemical Engineering</a>
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-AIChE</a>
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-Radiation</a>
-<a href=/tags/rumen/ class="icon-link card-link"><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M0 32V256L224 480 448 256 224 32H0zm112 80a32 32 0 110 64 32 32 0 110-64z"/></svg></span>
-Rumen</a>
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-Microbial Electrolysis Cells</a></div></div></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2020 Thomas A. Christensen II<br>Licensed
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categories/thesis/index.xml

@@ -1 +0,0 @@
-<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Thesis on MillironX</title><link>https://millironx.com/categories/thesis/</link><description>Recent content in Thesis on MillironX</description><generator>Hugo</generator><language>en-us</language><lastBuildDate>Fri, 07 Aug 2020 00:00:00 +0000</lastBuildDate><atom:link href="https://millironx.com/categories/thesis/index.xml" rel="self" type="application/rss+xml"/><item><title>Polyoxometalate Incorporation and Effects on Proton Transport in Hydrogel Polymers</title><link>https://millironx.com/academia/thesis/</link><pubDate>Fri, 07 Aug 2020 00:00:00 +0000</pubDate><guid>https://millironx.com/academia/thesis/</guid><description>Polyoxometalate clusters embedded into hydrogel biobeads may be able to solve the challenges posed by free proton generation during remediation of trichloroethylene by acting as buffers and reducing protons to hydrogen gas. In this thesis, the challenges posed by systems that contain both diffusion and reaction processes for protons are considered mathematically, and a computer simulation to was developed to prove the relationship between diaphragm cell lag period and reactive capabilities of membranes.</description></item><item><title>The ChemE Car that Cud: AIChE ChemE Car Engineering Design Proposal</title><link>https://millironx.com/academia/cheme-car/</link><pubDate>Tue, 14 May 2019 00:00:00 +0000</pubDate><guid>https://millironx.com/academia/cheme-car/</guid><description>The ChemE Car That Cud showcases Wyoming&amp;rsquo;s dominant industries of agriculture and mining by utilizing rumen fluid from a cannulated beef cow to generate hydrogen to be used in a hydrogen fuel cell and radioactive cesium, a byproduct of uranium that is often obtained from Wyoming&amp;rsquo;s mines, to time the car&amp;rsquo;s stop. The concentration of cesium-137 source is measured using the radioactive decay of cesium shielded by aluminum. The painted aluminum chassis was obtained from a previous team at UW, and modified using plastic k&amp;rsquo;nex toys to adapt to the current power source and stopping mechanism.</description></item></channel></rss>

categories/video/index.html

@@ -1,17 +0,0 @@
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-Websites</a></nav></aside><main><style>.motto::before{background-image:url(/images/saddles_hu1143faa57f5b1acd11a97eda612b56ee_388130_6000x2000_fill_q75_box_center.jpg)}</style><div class=motto title><div class=motto-inside><h1 id=motto>Video</h1></div></div><section><div></div><div class=card><a class=category-button href=/categories/video/ title=Video><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span></a><div class=card-header><img class=img-thumbnail src=/videos/ag-olympics-reel/thumbnail_hub7d50004da040fae48be1df6dea16829_174780_600x0_resize_q75_box.jpg alt="Thumbnail of thumbnail.jpg"></div><div class=card-body><div class=card-title><a href=/videos/ag-olympics-reel/><h3>Farm Bureau Ag Olympics Reel</h3></a></div><div>16 Feb 2017</div><p class=card-text>The Albany County Farm Bureau Young Farmer&rsquo;s and Rancher&rsquo;s committee asked me to come and shoot a highlight reel of the Ag Olympics booth they ran at the Wyoming Football Wyoming Needs Agriculture Day. I gave away all rights to this one except for bragging rights.
-<strong><small><a href=/videos/ag-olympics-reel/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><a class=category-button href=/categories/video/ title=Video><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span></a><div class=card-header><img class=img-thumbnail src=/videos/if-you-come-out-to-the-fair/thumbnail_hu834e3603c34a0a256fdd826d65f58c0f_231848_600x0_resize_q75_box.jpg alt="Thumbnail of thumbnail.jpg"></div><div class=card-body><div class=card-title><a href=/videos/if-you-come-out-to-the-fair/><h3>If You Come Out to the Fair</h3></a></div><div>13 Oct 2016</div><p class=card-text>My extension agent asked me to make a promotional video for our county fair. This is the only film of mine that has drawn an emotional response. I think I retired after this.
-<strong><small><a href=/videos/if-you-come-out-to-the-fair/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><a class=category-button href=/categories/video/ title=Video><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span></a><div class=card-header><img class=img-thumbnail src=/videos/in-the-hayfields/thumbnail_hu97c4397bc929e5bdb768d50fcf70af2f_99221_600x0_resize_q75_box.jpg alt="Thumbnail of thumbnail.jpg"></div><div class=card-body><div class=card-title><a href=/videos/in-the-hayfields/><h3>In The Hayfields</h3></a></div><div>05 Oct 2015</div><p class=card-text>I always get the comment that our implements are old whenever I show this video off. I just ignore the naysayers, though, and good thing, too, because a version of this video won a GoPro Award. Still waiting to see my footage on their channel, though.
-<strong><small><a href=/videos/in-the-hayfields/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><a class=category-button href=/categories/video/ title=Video><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span></a><div class=card-header><img class=img-thumbnail src=/videos/non-verum/thumbnail_hu8c03ad5c4f1b76dafd779c6adec882a7_221237_600x0_resize_q75_box.jpg alt="Thumbnail of thumbnail.jpg"></div><div class=card-body><div class=card-title><a href=/videos/non-verum/><h3>Non. Verum: The Mystery Killer</h3></a></div><div>12 Jun 2015</div><p class=card-text>My first documentary mockumentary. This film won 2nd place at the 2016 National 4-H Film Festival, and I&rsquo;ve been told that it&rsquo;s more polished than the pieces done by the local TV stations. No one seems to think it&rsquo;s funny, though, so I&rsquo;m not sure how successful it was. Please do me a favor and google every term you don&rsquo;t understand while watching it, and perhaps you&rsquo;ll fare better.
-<strong><small><a href=/videos/non-verum/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2017 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

categories/video/index.xml

@@ -1 +0,0 @@
-<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Video on MillironX</title><link>https://millironx.com/categories/video/</link><description>Recent content in Video on MillironX</description><generator>Hugo</generator><language>en-us</language><lastBuildDate>Thu, 16 Feb 2017 00:00:00 +0000</lastBuildDate><atom:link href="https://millironx.com/categories/video/index.xml" rel="self" type="application/rss+xml"/><item><title>Farm Bureau Ag Olympics Reel</title><link>https://millironx.com/videos/ag-olympics-reel/</link><pubDate>Thu, 16 Feb 2017 00:00:00 +0000</pubDate><guid>https://millironx.com/videos/ag-olympics-reel/</guid><description>The Albany County Farm Bureau Young Farmer&amp;rsquo;s and Rancher&amp;rsquo;s committee asked me to come and shoot a highlight reel of the Ag Olympics booth they ran at the Wyoming Football Wyoming Needs Agriculture Day. I gave away all rights to this one except for bragging rights.</description></item><item><title>If You Come Out to the Fair</title><link>https://millironx.com/videos/if-you-come-out-to-the-fair/</link><pubDate>Thu, 13 Oct 2016 00:00:00 +0000</pubDate><guid>https://millironx.com/videos/if-you-come-out-to-the-fair/</guid><description>My extension agent asked me to make a promotional video for our county fair. This is the only film of mine that has drawn an emotional response. I think I retired after this.</description></item><item><title>In The Hayfields</title><link>https://millironx.com/videos/in-the-hayfields/</link><pubDate>Mon, 05 Oct 2015 00:00:00 +0000</pubDate><guid>https://millironx.com/videos/in-the-hayfields/</guid><description>I always get the comment that our implements are old whenever I show this video off. I just ignore the naysayers, though, and good thing, too, because a version of this video won a GoPro Award. Still waiting to see my footage on their channel, though.</description></item><item><title>Non. Verum: The Mystery Killer</title><link>https://millironx.com/videos/non-verum/</link><pubDate>Fri, 12 Jun 2015 00:00:00 +0000</pubDate><guid>https://millironx.com/videos/non-verum/</guid><description>My first documentary mockumentary. This film won 2nd place at the 2016 National 4-H Film Festival, and I&amp;rsquo;ve been told that it&amp;rsquo;s more polished than the pieces done by the local TV stations. No one seems to think it&amp;rsquo;s funny, though, so I&amp;rsquo;m not sure how successful it was. Please do me a favor and google every term you don&amp;rsquo;t understand while watching it, and perhaps you&amp;rsquo;ll fare better.</description></item></channel></rss>

categories/web/index.html

@@ -1,15 +0,0 @@
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-Videos
-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><style>.motto::before{background-image:url(/images/saddles_hu1143faa57f5b1acd11a97eda612b56ee_388130_6000x2000_fill_q75_box_center.jpg)}</style><div class=motto title><div class=motto-inside><h1 id=motto>Web</h1></div></div><section><div></div><div class=card><a class=category-button href=/categories/web/ title=Web><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M352 256c0-22.1-2.2-43.5-6.1-64H166.1c-3.9 20.5-6.1 41.9-6.1 64s2.2 43.5 6.1 64H345.9c3.9-20.5 6.1-41.9 6.1-64zm26.4-64c3.6 20.5 5.6 41.9 5.6 64s-2 43.5-5.6 64H503.9c5.3-20.5 8.1-41.9 8.1-64s-2.8-43.5-8.1-64H378.4zm115-32c-33-81.5-106.7-142.2-196-156.7 25.7 36.7 57 91 74 156.7h122zm-155.1.0c-11.4-40.2-28.4-75.9-45.8-105.4-13-21.9-25.9-40-36.5-53.5-10.5 13.5-23.5 31.6-36.5 53.5C202.1 84 185 119.7 173.7 160H338.3zm-197.7.0c17-65.6 48.3-120 74-156.7-89.2 14.5-163 75.2-196 156.7h122zM8.1 192C2.8 212.5.0 233.9.0 256s2.8 43.5 8.1 64H133.6c-3.6-20.5-5.6-41.9-5.6-64s2-43.5 5.6-64H8.1zM173.7 352c11.4 40.2 28.4 75.9 45.8 105.4 13 21.9 25.9 40 36.5 53.5 10.5-13.5 23.5-31.6 36.5-53.5C309.9 428 327 392.3 338.3 352H173.7zm-33.2.0H18.6c33 81.5 106.7 142.2 196 156.7-25.7-36.7-57-91-74-156.7zm352.8.0h-122c-17 65.6-48.3 120-74 156.7 89.2-14.5 163-75.2 196-156.7z"/></svg></span></a><div class=card-header><img class=img-thumbnail src=/websites/millironx/thumbnail_hubcf181c388c669c8dc96bb18248e655a_1401448_600x0_resize_box_3.png alt="Thumbnail of thumbnail.png"></div><div class=card-body><div class=card-title><a href=/websites/millironx/><h3>Milliron X</h3></a></div><div>01 Mar 2022</div><p class=card-text>Lo and behold: I made my own website!
-<strong><small><a href=/websites/millironx/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div><div class=card><a class=category-button href=/categories/web/ title=Web><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M352 256c0-22.1-2.2-43.5-6.1-64H166.1c-3.9 20.5-6.1 41.9-6.1 64s2.2 43.5 6.1 64H345.9c3.9-20.5 6.1-41.9 6.1-64zm26.4-64c3.6 20.5 5.6 41.9 5.6 64s-2 43.5-5.6 64H503.9c5.3-20.5 8.1-41.9 8.1-64s-2.8-43.5-8.1-64H378.4zm115-32c-33-81.5-106.7-142.2-196-156.7 25.7 36.7 57 91 74 156.7h122zm-155.1.0c-11.4-40.2-28.4-75.9-45.8-105.4-13-21.9-25.9-40-36.5-53.5-10.5 13.5-23.5 31.6-36.5 53.5C202.1 84 185 119.7 173.7 160H338.3zm-197.7.0c17-65.6 48.3-120 74-156.7-89.2 14.5-163 75.2-196 156.7h122zM8.1 192C2.8 212.5.0 233.9.0 256s2.8 43.5 8.1 64H133.6c-3.6-20.5-5.6-41.9-5.6-64s2-43.5 5.6-64H8.1zM173.7 352c11.4 40.2 28.4 75.9 45.8 105.4 13 21.9 25.9 40 36.5 53.5 10.5-13.5 23.5-31.6 36.5-53.5C309.9 428 327 392.3 338.3 352H173.7zm-33.2.0H18.6c33 81.5 106.7 142.2 196 156.7-25.7-36.7-57-91-74-156.7zm352.8.0h-122c-17 65.6-48.3 120-74 156.7 89.2-14.5 163-75.2 196-156.7z"/></svg></span></a><div class=card-header><img class=img-thumbnail src=/websites/record-books/thumbnail_hubee456e49703e4842c3e3b7e624a57f4_430158_600x0_resize_box_3.png alt="Thumbnail of thumbnail.png"></div><div class=card-body><div class=card-title><a href=/websites/record-books/><h3>Albany County 4-H Record Books</h3></a></div><div>10 Aug 2019</div><p class=card-text>I constructed this site to hold the record book helps of the rebellious Albany County, Wyoming. Due to the bureaucratic lag that it takes to update, it got updated just in time for Wyoming 4-H to ditch paper record books entirely. Oh, well.
-<strong><small><a href=/websites/record-books/>Read&nbsp;more&nbsp;&#187;</a></small></strong></p><div class=card-footer></div></div></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2022 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

categories/web/index.xml

@@ -1 +0,0 @@
-<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Web on MillironX</title><link>https://millironx.com/categories/web/</link><description>Recent content in Web on MillironX</description><generator>Hugo</generator><language>en-us</language><lastBuildDate>Tue, 01 Mar 2022 00:00:00 +0000</lastBuildDate><atom:link href="https://millironx.com/categories/web/index.xml" rel="self" type="application/rss+xml"/><item><title>Milliron X</title><link>https://millironx.com/websites/millironx/</link><pubDate>Tue, 01 Mar 2022 00:00:00 +0000</pubDate><guid>https://millironx.com/websites/millironx/</guid><description>Lo and behold: I made my own website!</description></item><item><title>Albany County 4-H Record Books</title><link>https://millironx.com/websites/record-books/</link><pubDate>Sat, 10 Aug 2019 00:00:00 +0000</pubDate><guid>https://millironx.com/websites/record-books/</guid><description>I constructed this site to hold the record book helps of the rebellious Albany County, Wyoming. Due to the bureaucratic lag that it takes to update, it got updated just in time for Wyoming 4-H to ditch paper record books entirely. Oh, well.</description></item></channel></rss>

config.toml

@@ -0,0 +1,82 @@
+baseURL = "https://millironx.com"
+languageCode = "en-us"
+title = "MillironX"
+paginate = 5
+
+[build]
+writeStats = true
+
+[Params]
+cardImage = "saddles"
+motto = ""
+
+[taxonomies]
+people = "people"
+tag = "tags"
+category = "categories"
+
+[module]
+
+[[module.mounts]]
+source = "static"
+target = "static"
+
+[[module.mounts]]
+source = "assets/graphics"
+target = "assets/graphics"
+
+[[module.mounts]]
+source = "assets/images"
+target = "assets/images"
+
+[[module.mounts]]
+source = "assets/scripts"
+target = "assets/scripts"
+
+[[module.mounts]]
+source = "assets/styles"
+target = "assets/styles"
+
+[[modules.mounts]]
+source = "assets/scripts/custom"
+target = "assets/scripts/custom"
+
+[[module.mounts]]
+source = "./node_modules/@fortawesome/fontawesome-pro/js"
+target = "assets/scripts/fontawesome"
+
+[[module.mounts]]
+source = "./node_modules/@popperjs/core/dist/umd"
+target = "assets/scripts/popper"
+
+[[module.mounts]]
+source = "./node_modules/bootstrap/scss"
+target = "assets/styles/bootstrap"
+
+[[module.mounts]]
+source = "./node_modules/bootswatch/dist/"
+target = "assets/styles/bootswatch"
+
+[[module.mounts]]
+source = "./node_modules/@openfonts/nunito-sans_all"
+target = "static/fonts/nunito-sans"
+
+[[module.mounts]]
+source = "./node_modules/bootstrap/dist/js"
+target = "assets/scripts/bootstrap"
+
+[[module.mounts]]
+source = "./node_modules/fittext.js"
+target = "assets/scripts/fittext"
+
+[[module.mounts]]
+source = "./node_modules/jquery/dist"
+target = "assets/scripts/jquery"
+
+[[module.mounts]]
+source = "./node_modules/jquery-mask-plugin/dist"
+target = "assets/scripts/jquery-mask-plugin"
+
+[[module.mounts]]
+source = "./node_modules/masonry-layout/dist"
+target = "assets/scripts/masonry"

contact/index.html

@@ -1,26 +0,0 @@
-<!doctype html><html class=no-js lang=en><head><meta charset=utf-8><meta http-equiv=x-ua-compatible content="ie=edge"><meta name=viewport content="width=device-width,initial-scale=1"><meta name=description content="Contact form to get ahold of me"><title>Contact Me - MillironX</title>
-<link href=/styles/millironx.min.css rel=stylesheet></head><body><header><object data=/graphics/millironx.svg>
-<img src=/graphics/millironx.svg alt="Milliron X"></object><h1 class=font-small-caps>Milliron X</h1></header><div class=row><aside><nav><a href=/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M511.8 287.6H576V240L288.4.0.0 240v47.6H64.1V512H224V352H352V512H512.8l-1-224.4z"/></svg></span>
-Home
-</a><a class=active href=/contact/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M224 0H0V512H384V427l-1.7 1.7-120.1 17.2-11.7 1.9-11.6 1.9-5.3-10.5L222.1 416H209.9l-11.6 23.2-4.4 8.8H184h-8-11.9l-3.4-11.4L144 381l-16.7 55.6L123.9 448H112 80 64V416H80h20.1l20.6-68.6 3.4-11.4H136h16 11.9l3.4 11.4 15.4 51.4 3-5.9 4.4-8.8H2e2h32 9.9l4.4 8.8 7.2 14.5 13.5-94 117-117V160H224V0zm32 0V128H384L256 0zM505 119.8l-41.3 41.3 71 71L576 190.8l-71-71zm-63.9 63.9L299.9 325 288 407.9 370.9 396 512.1 254.7l-71-71z"/></svg></span>
-Contact
-</a><a href=/academia/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 144 256 0 512 144v48H0V144zM0 512V464l64-48V224h64V416h40V224h64V416h48V224h64V416h40V224h64V416l64 48v48H0zM256 144a32 32 0 100-64 32 32 0 100 64z"/></svg></span>
-Academia
-</a><a href=/videos/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><path d="M384 64H0V448H384V64zM576 448V64L416 174.9V337.1L576 448z"/></svg></span>
-Videos
-</a><a href=/websites/><span class="fa-container fa-fw"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M0 32H512V480H0V32zm160 72v48H448V104H160zm-32-8H64v64h64V96z"/></svg></span>
-Websites</a></nav></aside><main><style>.motto::before{background-image:url(/images/venice-mailbox_huaca7206bc3a55ef0548c2d4a3e1778c4_598517_6000x2000_fill_q75_box_center.jpg)}</style><div class=motto title="This mailbox was used for reporting public health offenses in Venice. It survived the wrath of Napoleon because it didn't look enough like a lion."><div class=motto-inside><h1 id=motto>Contact Me</h1></div></div><section><div><form action=https://usebasin.com/f/787df7bfd22e method=post><fieldset><legend>Contact Me</legend><input type=hidden name=_gotcha>
-<label for=name>Name</label>
-<input type=text class=form-control id=name name=name placeholder="Jay Lush" required>
-<label for=email>Email</label>
-<input type=email class=form-control id=email name=email placeholder=jlush@iastate.edu required>
-<label for=phone>Phone number</label>
-<input type=tel class=form-control id=phone name=phone placeholder="(515) 294-2160">
-<label for=subject>Subject</label>
-<input type=text class=form-control id=subject name=subject placeholder="Beef genetics" required>
-<label for=message>Message</label>
-<textarea rows=5 class="form-control font-sans" id=message name=body required style=min-height:72pt></textarea>
-<button type=reset class="btn btn-default">Cancel</button>
-<button type=submit class="btn btn-primary pageclip-form__submit">
-<span>Submit</span></button></fieldset></form></div></section></main></div><footer><img src=/graphics/brandedbull.min.svg height=95rem><p>&copy; 2023 Thomas A. Christensen II<br>Licensed
-<a rel=license href=http://creativecommons.org/licenses/by/4.0/>CC-BY 4.0</a><br>Built with <a href=https://gohugo.io>Hugo</a> v0.126.1</p></footer><script src=/js/jquery-bundle.js></script><script data-goatcounter=https://millironx.goatcounter.com/count async src=//gc.zgo.at/count.js></script></body></html>

contact/index.xml

@@ -1 +0,0 @@
-<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Contact Me on MillironX</title><link>https://millironx.com/contact/</link><description>Recent content in Contact Me on MillironX</description><generator>Hugo</generator><language>en-us</language><lastBuildDate/><atom:link href="https://millironx.com/contact/index.xml" rel="self" type="application/rss+xml"/></channel></rss>

content/_index.html

@@ -0,0 +1,171 @@
+---
+title: Home
+cardImage: charolette
+motto: <small>My name is Thomas Christensen</small><br />I am Milliron X
+description: The homepage of Thomas A. Christensen II
+layout: _default/list
+menu:
+  main:
+    params:
+      prefix: fad
+      icon: fa-home
+    weight: -1000
+---
+
+<h2>What is a "Milliron X"?</h2>
+
+<h3>
+  It's a
+  <a href="https://en.wikipedia.org/wiki/Livestock_branding">cattle brand</a>,
+  of course! My cattle brand!
+</h3>
+
+<p>
+  The <dfn>milliron</dfn> is the bar with a bend in the middle. It does not
+  represent anything physical or textual <i>per se</i>, and is therefore a
+  rather unique element in cattle brands. Millirons are difficult to modify into
+  another brand, and provide a guarantee of authentic ownership.
+</p>
+
+<p>
+  <dfn>X</dfn> is the letter of mystery and mystique. For nerds, it's the
+  unknown in any algebra problem. Ranchers and cowboys will associate it with
+  big names like the "Bar X" and the "Double X." In either case, it lends itself
+  to a sense of withholding, prestige, and power.
+</p>
+
+<p>
+  Together, these two symbols represent the qualities I strive for in each of my
+  works: authenticity, originality, power, depth, and prestige.
+</p>
+
+<h2>Who am I?</h2>
+
+{{% imgproc me-and-lady Resize "768x" "float-md-end w-md-50 p-3" %}}
+Image courtesy [Guy McCutcheon Photography](https://www.guymccutcheon.com/)
+{{% /imgproc %}}
+
+
+<p>I am</p>
+
+<ul>
+  <li>🧬 A bioinformatician (by profession)</li>
+  <li>📐 An engineer (by education)</li>
+  <li>🐂 A rancher (by lifestyle)</li>
+  <li>🖥️ A techie (self-taught)</li>
+  <li>🎥 And a filmmaker (at heart)</li>
+</ul>
+
+<p>
+  I've got a soft spot for Brown Swiss dairy cows (just in case you couldn't
+  tell by the pictures), and am sometimes called "one of those crazy, Wyoming
+  dairy cow people." I love anything to do with cattle or technology, but
+  especially anything to do with both of them.
+</p>
+
+<p>
+  <em>
+    <abbr
+      title="Born again, fundamentalist, dispensationalist, King James Bible-believing, independent Baptist"
+      >Christian</abbr
+    >, American, Convervative, Pro-gun, Heterosexual - any questions?
+  </em>
+</p>
+
+<h2>Where am I?</h2>
+
+{{% imgproc wy-in-ks Resize "768x" "float-md-start w-md-50 p-3" / %}}
+
+
+<p>
+  I am a Wyomingite sojurning in Kansas. That ought to lead to some interesting
+  stories.
+</p>
+
+Around the web you can find me at (in order of subjective importance)
+
+<ul class="float-md-end w-md-50">
+  <li>
+    <i class="fab fa-fw fa-github"></i> GitHub:
+    <a href="https://github.com/MillironX">@MillironX</a>
+  </li>
+  <li>
+    <i class="fab fa-fw fa-orcid"></i>
+    ORCiD:
+    <a href="https://orcid.org/0000-0003-1219-9320">0000-0003-1219-9320</a>
+  </li>
+  <li>
+    <i class="fab fa-fw fa-gitlab"></i>
+    GitLab: <a href="https://gitlab.com/MillironX">@MillironX</a>
+  </li>
+  <li>
+    <i class="fab fa-fw fa-vimeo"></i>
+    Vimeo: <a href="https://vimeo.com/tchristensenii">Thomas Christensen II</a>
+  </li>
+  <li>
+    <i class="fab fa-fw fa-stack-overflow"></i>
+    Stack Exchange:
+    <a href="https://stackexchange.com/users/4863541/milliron-x">Milliron X</a>
+  </li>
+  <li>
+    <i class="fad fa-fw fa-user-astronaut"></i>
+    Odysee: <a href="https://odysee.com/@millironx:f">@millironx</a>
+  </li>
+  <li>
+    <span class="fa-layers fa-fw">
+      <i class="fad fa-fw fa-comment"></i>
+      <span class="fa-layers-text" data-fa-transform="shrink-6 up-2">g</span>
+    </span>
+    Gab: <a href="https://gab.com/millironx">@MillironX</a>
+  </li>
+  <li>
+    <i class="fab fa-fw fa-steam"></i>
+    Steam: <a href="https://steamcommunity.com/id/millironx">MillironX</a>
+  </li>
+  <li>
+    <span class="fa-layers fa-fw">
+      <i class="fad fa-fw fa-w" data-fa-transform="shrink-2 down-2"></i>
+      <i class="fad fa-fw fa-ellipsis" data-fa-transform="grow-3 up-8"></i>
+    </span>
+    MeWe:
+    <a href="https://mewe.com/i/thomaschristensenii">Thomas Christensen II</a>
+  </li>
+  <li>
+    <i class="fab fa-fw fa-discord"></i>
+    Discord:
+    <a href="https://discord.com/users/484492414837587978">@MillironX</a>
+  </li>
+</ul>
+
+<div style="clear: both;"></div>
+
+<div class="card border-warning m-3">
+  <div class="card-body">
+    <p class="card-text">
+      This list is intended to verify my identity on other sites. Please do
+      <em>not</em> use it as fodder to try and "follow" me on each of these
+      platforms. I stand with RMS:
+    </p>
+    <figure>
+      <blockquote class="blockquote">
+        <p>
+          Facebook is a bad place for a person to be. When people find us on
+          Facebook, we lead them away from Facebook and then talk with them
+          elsewhere.
+        </p>
+      </blockquote>
+      <figcaption class="blockquote-footer">
+        Richard Stallman in
+        <cite
+          ><a href="https://stallman.org/facebook-presence.html"
+            >If you feel your organization needs a 'presence' in Facebook</a
+          ></cite
+        >
+      </figcaption>
+    </figure>
+    <p class="card-text">
+      I typically don't respond to inqueries made on these platforms. Please use
+      <a href="/contact">my contact form</a>, instead.
+    </p>
+  </div>
+</div>

content/academia/_index.md

@@ -0,0 +1,25 @@
+---
+title: Academic Publications and Presentations
+motto: Publications and Presentations
+cardImage: library
+decription: A list of my academic publications
+menu:
+  main:
+    name: Academia
+    params:
+      prefix: fad
+      icon: fa-university
+    weight: 20
+fa-thumbnail: fad fa-university
+---
+
+> I have spent too long in school and not enough time in the middle of nowhere
+>
+> -- Baxter Black, DVM
+
+During my time in academia, I have amassed a few notable accomplishments. Of
+course, as the old saying goes, "if it isn't published, then it never happened,"
+so here is a list of everything that actually happened. Several of these
+articles are also available on
+[my Google Scholar page](https://scholar.google.com/citations?user=gbP4RDgAAAAJ),
+but this is the complete list.

content/academia/cheme-car/index.md

@@ -0,0 +1,29 @@
+---
+title: "The ChemE Car that Cud: AIChE ChemE Car Engineering Design Proposal"
+date: 2019-05-14
+cardImage: cannulated-cows
+draft: false
+featured: true
+tags:
+  - chemical engineering
+  - AIChE
+  - radiation
+  - rumen
+  - microbial electrolysis cells
+categories:
+  - thesis
+people:
+  - Thomas A. Christensen II
+link: https://doi.org/10.15786/13700938.v1
+journal: "University of Wyoming Honors Program"
+location: "Laramie, Wyoming"
+---
+
+The ChemE Car That Cud showcases Wyoming's dominant industries of agriculture
+and mining by utilizing rumen fluid from a cannulated beef cow to generate
+hydrogen to be used in a hydrogen fuel cell and radioactive cesium, a byproduct
+of uranium that is often obtained from Wyoming's mines, to time the car's stop.
+The concentration of cesium-137 source is measured using the radioactive decay
+of cesium shielded by aluminum. The painted aluminum chassis was obtained from a
+previous team at UW, and modified using plastic k'nex toys to adapt to the
+current power source and stopping mechanism.

content/academia/how-to-build-a-cow-cud-fuel-cell.md

@@ -0,0 +1,15 @@
+---
+title: "How to Build a Cow-Cud Fuel Cell"
+date: 2018-08-01
+cardImage: library
+draft: false
+featured: false
+categories:
+  - presentation
+people:
+  - Thomas A. Christensen II
+journal: "Idaho INBRE Summer Research Conference"
+location: "Moscow, Idaho"
+awards:
+  - "3rd Place Fast-Pitch Science Presentation Contest"
+---

content/academia/hydronium-pva.md

@@ -0,0 +1,45 @@
+---
+title:
+  "Investigation of Hydronium Diffusion in Poly(vinyl alcohol) Hydrogels: A
+  Critical First Step to Describe Acid Transport for Encapsulated Bioremediation"
+date: 2022-09-02
+featured: false
+tags:
+  - diffusion
+  - hydrogels
+  - ionic strength
+  - polymers
+  - transport properties
+categories:
+  - paper
+people:
+  - Carson J. Silsby
+  - Jonathan R. Counts
+  - Thomas A. Christensen II
+  - Mark F. Roll
+  - Kristopher V. Waynant
+  - James G. Moberly
+link: https://doi.org/10.1021/acsestengg.2c00107
+journal: "ACS ES&T Engineering"
+---
+
+Bioremediation of chlorinated aliphatic hydrocarbon-contaminated aquifers can be
+hindered by high contaminant concentrations and acids generated during
+remediation. Encapsulating microbes in hydrogels may provide a protective,
+tunable environment from inhibiting compounds; however, current approaches to
+formulate successful encapsulated systems rely on trial and error rather than
+engineering approaches because fundamental information on mass-transfer
+coefficients is lacking. To address this knowledge gap, hydronium ion
+mass-transfer rates through two commonly used hydrogel materials, poly(vinyl
+alcohol) and alginic acid, under two solidification methods (chemical and
+cryogenic) were measured. Variations in hydrogel crosslinking conditions,
+polymer composition, and solvent ionic strength were investigated to understand
+how each influenced hydronium ion diffusivity. A three-way ANOVA indicated that
+the ionic strength, membrane type, and crosslinking method significantly (_p_ <
+0.001) contributed to changes in hydronium ion mass transfer. Hydronium ion
+diffusion increased with ionic strength, counter to what is observed in
+aqueous-only (no polymer) solutions. Co-occurring mechanisms correlated to
+increased hydronium ion diffusion with ionic strength included an increased
+water fraction within hydrogel matrices and hydrogel contraction. Measured
+diffusion rates determined in this study provide first principal design
+information to further optimize encapsulating hydrogels for bioremediation.

content/academia/metagenomics/index.md

@@ -0,0 +1,59 @@
+---
+title:
+  "Metagenomic analysis of rumen populations in week-old calves as altered by
+  maternal late gestational nutrition and mode of delivery"
+date: 2019-06-12
+cardImage: cannulated-cows
+draft: false
+featured: true
+tags:
+  - gestation
+  - metagenomics
+  - microbiome
+  - rumen
+categories:
+  - poster
+people:
+  - Thomas A. Christensen II
+  - Kathy J. Austin
+  - Kristi M. Cammack
+  - Hannah C. Cunningham-Hollinger
+link: "/academia/metagenomics/metagenomics_analysis_of_rumen_populations.pdf"
+journal: "Westion Section American Society of Animal Science Annual Meeting"
+location: "Boise, Idaho"
+awards:
+  - "1st Place Undergraduate Poster Competition"
+---
+
+Early colonization of the rumen microbiome is critical to host health and long
+term performance. Factors that influence early colonization include maternal
+factors such as gestational nutrition and mode of delivery. Therefore, we
+hypothesized that late gestational nutrition and mode of delivery would
+influence the calf rumen microbiome. Our objectives were to determine if
+nutrient restriction during late gestation alters the calf rumen microbiome and
+determine if ruminal microbiome composition differs in calves born vaginally
+versus caesarean. Late gestating Angus cows were randomly allocated to one of
+three treatment groups: control (**CON**; n = 6), caesarean section (**CS**; n =
+4), and nutrient restricted (**NR**; n = 5), where CON were fed DDGS and hay to
+meet NRC requirements and calved naturally; CS were fed similarly to CON and
+calves were born via caesarean section; and NR were fed at a level to reduce BCS
+by 1.5-2.0 points over the last trimester compared to CON and calved naturally.
+Rumen fluid was collected via oral lavage prior to partition from cows and at d
+7 from calves. Microbial DNA was isolated from the rumen fluid and metagenomic
+shotgun sequencing was performed using the Illumina HiSeq 2500 platform.
+Sequence data were analyzed using Metaxa2 for taxonomic assignment followed by
+QIIME1 and QIIME2 to determine differential abundance and alpha- and
+beta-diversity differences. There were no significant differences in
+alpha-diversity as measured by shannon index across treatment groups for cows
+(_P_ = 0.239), but there were significant differences for calves (_P_ = 0.015).
+Similarly, there were no significant differences in beta-diversity as measured
+by the bray-curtis dissimilarity matrix for cows (_P_ = 0.059), but there were
+significant differences for calves (_P_ = 0.007). Alpha-diversity differed (_P_
+< 0.001) between cows and calves, with cows having increased species richness
+compared to calves. Beta-diversity also differed (_P_ = 0.001) between cows and
+calves. At total of 410 taxa were differentially abundant (_P_ < 0.01) between
+cows and calves. These results suggest that the mature rumen microbiome of cows
+is able to withstand changes in feed intake, however the calf microbiome is
+susceptible to alteration by maternal factors. These data also suggest that
+there may be opportunities to develop management strategies during late
+gestation that influence calf health and performance long-term.

content/academia/pva-aiche/index.md

@@ -0,0 +1,45 @@
+---
+title:
+  "Measuring Diffusion of Trichlorethylene Breakdown Products in
+  Polyvinylalginate"
+date: 2018-10-29
+cardImage: library
+draft: false
+featured: false
+tags:
+  - bioremediation
+  - polyoxometalate
+  - hydrogel polymers
+  - proton transport
+  - chemical engineering
+categories:
+  - poster
+people:
+  - Thomas A. Christensen II
+  - Samuel R. Wolfe
+  - Jonathan Counts
+  - Mark F. Roll
+  - Kristopher V. Waynant
+  - James G. Moberly
+journal: "AIChE Annual Meeting"
+location: "Pittsburgh, Pennsylvania"
+awards:
+  - "3rd Place Environmental III Division Undergraduate Poster Competition"
+link: /academia/pva-aiche/measuring_diffusion_of_trichloroethylene.pdf
+---
+
+Trichloroethylene (TCE), a toxic and carcinogenic contaminant, presents unique
+challenges for cleanup because of its water solubility, density, and volatility.
+Bioremediation of TCE is a promising cleanup method; however, metabolism of TCE
+results in acid generation that inhibits remediating microorganisms. Calcium
+alginate(CA)-polyvinylalcohol (PVA) hydrogels show promise for protecting
+remediating microbes, however diffusion of TCE or its byproducts through these
+polymers is unknown. To measure the effective diffusion coefficient of TCE and
+byproducts through hydrogel membranes, we used a modified diaphragm cell.
+Measured effective diffusion coefficient of each species was (cm {{< sup 2 >}}/s
+× 10{{< sup 6 >}}): 14.0 ± 1.91 for H{{< sup "+" >}} ions, 12.4 ± 1.64 for TCE,
+7.83 ± 0.54 for cis-1,2-dichloroethylene (DCE), and 4.68 ± 4.14 for vinyl
+chloride. These results aid in engineering biobeads and suggest that CA-PVA
+hydrogel blends are effective in slowing diffusion of protons, buffering acids
+produced by trichloroethylene metabolism, and remains suitable for encapsulation
+of microorganisms involved in bioremediation.

content/academia/pva-inbre.md

@@ -0,0 +1,33 @@
+---
+title: "Measuring diffusion of protons in polyvinyalginate"
+date: 2018-07-31
+cardImage: library
+draft: false
+featured: false
+categories:
+  - poster
+people:
+  - Thomas A. Christensen II
+  - Jonathan Counts
+  - James G. Moberly
+journal: "Idaho INBRE Summer Research Conference"
+location: "Moscow, Idaho"
+---
+
+Trichloroethylene (TCE) is a toxic and carcinogenic contaminant that presents
+unique challenges for cleanup because of its density and volatility. Use of
+microorganisms may be a promising remediation method, however metabolism of TCE
+results in acid buildup, which consequently impedes the ability of
+microorganisms to perform this remediation. Polyvinylalginate (PVA) shows
+promise as a useful shield for microorganisms carrying out bioremediation of TCE
+by surrounding them in a protective biofilm-like layer, however, key information
+is missing which relates diffusion of TCE or its metabolic products through PVA.
+To measure the effective diffusion coefficient of H{{< sup "+" >}} ions through
+a PVA membrane cross-linked with boric acid and calcium ions, we used a modified
+diaphragm cell. We found the effective diffusion coefficient to be 1.40 &times;
+10{{< sup -5 >}} ± 1.91 &times; 10{{<sup -6 >}} cm{{< sup 2 >}}s, a nearly
+seven-fold decrease in diffusivity compared to protons in water, with an
+unexpected significant but as of yet unquantified adsorption capacity. These
+results suggest that polyvinylalginate is effective in slowing diffusion of
+protons and buffering these acids produced by trichloroethylene metabolism, and
+remains suitable for encapsulation of microorganisms involved in bioremediation.

content/academia/rotavirus-virome.md

@@ -0,0 +1,50 @@
+---
+title:
+  "Assessment of Porcine Rotavirus-associated virome variations in pigs with
+  enteric disease"
+date: 2022-04-27
+cardImage: cannulated-cows
+featured: true
+tags:
+  - porcine rotavirus
+  - porcine enteric disease
+  - virome
+  - rotavirus
+categories:
+  - paper
+people:
+  - Tyler Doerksen
+  - Thomas A. Christensen II
+  - Andrea Lu
+  - Lance Noll
+  - Jianfa Bai
+  - Jamie Henningson
+  - Rachel Palinski
+link: https://doi.org/10.1016/j.vetmic.2022.109447
+journal: Veterinary Microbiology
+---
+
+Enteric disease is the predominant cause of morbidity and mortality in young
+mammals including pigs. Viral species involved in porcine enteric disease
+complex (PEDC) include rotaviruses, coronaviruses, picornaviruses, astroviruses
+and pestiviruses among others. The virome of three groups of swine samples
+submitted to the Kansas State University Veterinary Diagnostic Laboratory for
+routine testing were assessed, namely, a Rotavirus A positive (RVA) group, a
+Rotavirus co-infection (RV) group and a Rotavirus Negative (RV Neg) group. All
+groups were designated by qRT-PCR results testing for Porcine Rotavirus A, B, C
+and H such that samples positive for RVA only went in the RVA group, samples
+positive for >1 rotavirus went in the RV group and samples negative for all were
+grouped in the RVNeg group. All of the animals had clinical enteric disease
+resulting in scours and swollen joints/lameness, enlarged heart and/or a cough.
+All samples were metagenomic sequenced and analyzed for viral species
+composition that identified 14 viral species and eight bacterial viruses/phages.
+Sapovirus and Escherichia coli phages were found at a high prevalence in RVA and
+RV samples but were found at low or no prevalence in the RV Neg samples.
+Picobirnavirus was identified at a high proportion and prevalence in RV Neg and
+RV samples but at a low prevalence in the RVA group. A sequence analysis of the
+possible host of Picobirnaviruses revealed fungi as the most likely host.
+Non-rotaviral diversity was highest in RVA samples followed by RV then RV Neg
+samples. Various sequences were extracted from the sample reads and a
+phylogenetic update was provided showing a high prevalence of G9 and P[23] RVA
+genotypes. These data are important for pathogen surveillance and control
+measures

content/academia/taxprofiler.md

@@ -0,0 +1,24 @@
+---
+title:
+  "nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling"
+date: 2023-10-23
+featured: true
+tags:
+  - genomics
+categories:
+  - paper
+people:
+  - Sofia Stamouli
+  - Moritz E. Beber
+  - Tanja Normark
+  - Thomas A. Christensen II
+  - Lili Andersson-Li
+  - Maxime Borry
+  - Mahwash Jamy
+  - nf-core community
+  - James A. Fellows Yate
+link: https://doi.org/10.1101/2023.10.20.563221
+journal: bioRxiv
+---
+
+Metagenomic classification tackles the problem of characterising the taxonomic source of all DNA sequencing reads in a sample. A common approach to address the differences and biases between the many different taxonomic classification tools is to run metagenomic data through multiple classification tools and databases. This, however, is a very time-consuming task when performed manually - particularly when combined with the appropriate preprocessing of sequencing reads before the classification. Here we present nf-core/taxprofiler, a highly parallelised read-processing and taxonomic classification pipeline. It is designed for the automated and simultaneous classification and/or profiling of both short- and long-read metagenomic sequencing libraries against a 11 taxonomic classifiers and profilers as well as databases within a single pipeline run. Implemented in Nextflow and as part of the nf-core initiative, the pipeline benefits from high levels of scalability and portability, accommodating from small to extremely large projects on a wide range of computing infrastructure. It has been developed following best-practise software development practises and community support to ensure longevity and adaptability of the pipeline, to help keep it up to date with the field of metagenomics.

content/academia/thesis.md

@@ -0,0 +1,44 @@
+---
+title:
+  "Polyoxometalate Incorporation and Effects on Proton Transport in Hydrogel
+  Polymers"
+date: 2020-08-07
+cardImage: library
+draft: false
+featured: true
+tags:
+  - bioremediation
+  - polyoxometalate
+  - hydrogel polymers
+  - proton transport
+  - chemical engineering
+categories:
+  - thesis
+people:
+  - Thomas A. Christensen II
+link: "https://www.proquest.com/dissertations-theses/polyoxometalate-incorporation-effects-on-proton/docview/2502214356/se-2"
+journal: "University of Idaho"
+location: "Moscow, Idaho"
+---
+
+Polyoxometalate clusters embedded into hydrogel biobeads may be able to solve
+the challenges posed by free proton generation during remediation of
+trichloroethylene by acting as buffers and reducing protons to hydrogen gas. In
+this thesis, the challenges posed by systems that contain both diffusion and
+reaction processes for protons are considered mathematically, and a computer
+simulation to was developed to prove the relationship between diaphragm cell lag
+period and reactive capabilities of membranes. Two polyoxometalate compounds,
+sodium decavanadate and alumina sulfate, were successfully incorporated into a
+poly(vinyl alcohol) hydrogel membrane, and the diffusivity changes associated
+with each compound was determined. It was found that the diffusivity of protons
+through an unmodified 10% w/v poly(vinyl alcohol) membrane was 1.76 ×
+10{{< sup -5 >}} cm{{< sup 2 >}} s{{< sup -1 >}}, the diffusivity through a
+10%/2% w/w/v poly(vinyl alcohol)/sodium decavanadate membrane was 3.10 ×
+10{{< sup -6 >}} cm{{< sup 2 >}} s{{< sup -1 >}}, and the diffusivity through a
+10%/2% w/w/v poly(vinyl alcohol)/alumina sulfate membrane was 3.32 ×
+10{{< sup -7 >}} cm{{< sup 2 >}} s{{< sup -1 >}}. Through analysis of the
+diaphragm cell lag period, it was found the incorporation of sodium decavanadate
+did not increase the reactivity of a poly(vinyl alcohol) hydrogel, and
+incorporation of alumina sulfate lowered the reactivity. These results indicate
+that polyoxometalate integration into hydrogel membranes is feasible, but does
+not provide any advantage to a bioremediation scenario.

content/ai/_index.html

@@ -0,0 +1,76 @@
+---
+title: Artificial Insemination
+cardImage: Ai-calf
+motto: Artificial Insemination
+description:
+  Advertising page to try and sell my artificial insemination services
+date: 2022-12-31
+menu:
+  main:
+    params:
+      prefix: fax
+      icon: fa-bull-sperm
+    weight: 30
+fa-thumbnail: fax fa-bull-sperm
+---
+
+<section itemscope itemtype="http://schema.org/Product">
+  <h2 itemprop="name">Cattle artificial insemination services</h2>
+
+  <p>
+    I am licensed in the Great State of Wyoming as a food animal artificial
+    insemination technician. I only offer AI services for cows, even though
+    legally I <em>could</em> AI cows, goats, and sheep. My services are most
+    readily available in the southeast Wyoming area or the Flint Hills of Kansas
+    depending on the time of year.
+  </p>
+
+  <h3>Rate schedule</h3>
+
+  <div itemprop="offers" itemscope itemtype="http://schema.org/Offer">
+    <table
+      itemprop="priceSpecification"
+      itemscope
+      itemtype="http://schema.org/CompoundPriceSpecification"
+      class="table table-responsive table-striped"
+    >
+      <meta itemprop="price" content="25.00" />
+      <meta itemprop="priceCurrency" content="USD" />
+      <tr
+        itemprop="priceComponent"
+        itemscope
+        itemtype="http://schema.org/UnitPriceSpecification"
+      >
+        <th>Insemination</th>
+        <td><small>(per cow)</small></td>
+        <td>
+          <span itemprop="priceCurrency" content="USD">$</span
+          ><span itemprop="price">25.00</span>
+        </td>
+        <td><small>5 cow minimum charge</small></td>
+      </tr>
+      <tr
+        itemprop="priceComponent"
+        itemscope
+        itemtype="http://schema.org/UnitPriceSpecification"
+      >
+        <th>Milage</th>
+        <td><small>(per mile, one-way)</small></td>
+        <td>
+          <span itemprop="priceCurrency" content="USD">$</span
+          ><span itemprop="price">1.05</span>
+        </td>
+        <td><small>2.5 mile minimum charge</small></td>
+      </tr>
+    </table>
+  </div>
+
+  <p>
+    I will provide all equipment <strong>except</strong> semen storage (liquid
+    nitrogen tank) and cattle handling (i.e., squeeze chute).
+  </p>
+  <p>
+    To get started, <a href="/contact">contact me</a>, and select the "I'm
+    hiring for artificial insemination" option.
+  </p>
+</section>

content/blogroll/_index.md

@@ -0,0 +1,45 @@
+---
+draft: true
+---
+
+## Stuff I like on the internet
+
+This section of a website used to be called a "blogroll." I don't know what it's
+called now. In order to be on this list, I must have been subscribed or
+otherwise follow it for over a year. It's amazing how little stuff on the
+internet can't make that cut.
+
+### [Thru the Bible](https://ttb.org/)
+
+I'm convinced that the word of God is timeless, and we need less commentary and
+cherry-picking of favorite verses, and more study of the complete Bible. Dr.
+McGee does just that.
+
+### [Enoch the Cow Vet](https://youtube.com/channel/UC6PPmHUbcdOSzX5tLB3uXdw)
+
+A veterinarian/agricultural channel that doesn't make me cringe. "God built
+these things for cows for vets ... [there are] so many aspects of the cow that
+are just designed for vets." Amen, Enoch. Amen.
+
+### [Proglogion](https://blog.drwile.com/)
+
+The blog of my high school science teacher (of sorts). It is refreshing to find
+a creationist who can still think critically. I love his "bad sermon
+illustrations" posts.
+
+### [The Milk Check](https://www.jacoby.com/learning-center/podcasts-overview/)
+
+A pragmatic inside look at dairy marketing. I only understand half of what
+they're talking about, but I learn something new every episode.
+
+### [Brian Harry's Blog](https://devblogs.microsoft.com/bharry/)
+
+Where else are you going to find a blog about cows _and_ version control? The
+blog is basically dead now, but it's still fun to go back and read the farm
+stories.
+
+### [Car Talk](https://cartalk.com/)
+
+The antics of these guys are enough to make anyone have to pull over to the side
+of the road from laughing too much. I dread the day when NPR fully axes the only
+good program to cross their airwaves.

content/contact/_index.html

@@ -0,0 +1,107 @@
+---
+title: Contact Me
+cardImage: venice-mailbox
+motto: Contact Me
+description: Contact form to get ahold of me
+date: 2023-07-01
+menu:
+  main:
+    name: Contact
+    params:
+      prefix: fad
+      icon: fa-file-signature
+    weight: 1
+fa-thumbnail: fad fa-file-signature
+---
+
+<form
+  class="form-horizontal"
+  action="https://usebasin.com/f/787df7bfd22e"
+  method="post"
+>
+  <fieldset>
+    <legend>Contact Me</legend>
+    <input type="hidden" name="_gotcha" />
+    <div class="form-group">
+      <label for="name" class="col-lg-2 control-label">Name</label>
+      <div class="col-lg-10">
+        <input
+          type="text"
+          class="form-control"
+          id="name"
+          name="name"
+          placeholder="Jay Lush"
+          required
+        />
+      </div>
+    </div>
+    <div class="form-group">
+      <label for="email" class="col-lg-2 control-label">Email</label>
+      <div class="col-lg-10">
+        <input
+          type="email"
+          class="form-control"
+          id="email"
+          name="email"
+          placeholder="jlush@iastate.edu"
+          required
+        />
+      </div>
+    </div>
+    <div class="form-group">
+      <label for="phone" class="col-lg-2 control-label">Phone number</label>
+      <div class="col-lg-10">
+        <input
+          type="tel"
+          class="form-control"
+          id="phone"
+          name="phone"
+          placeholder="(515) 294-2160"
+        />
+      </div>
+    </div>
+    <div class="form-group">
+      <label for="category" class="col-lg-2 control-label">Category</label>
+      <div class="col-lg-10">
+        <select class="form-select" id="category">
+          <option>I'm hiring for artificial insemination</option>
+          <option>Something else</option>
+        </select>
+      </div>
+    </div>
+    <div class="form-group">
+      <label for="subject" class="col-lg-2 control-label">Subject</label>
+      <div class="col-lg-10">
+        <input
+          type="text"
+          class="form-control"
+          id="subject"
+          name="subject"
+          placeholder="Beef genetics"
+          required
+        />
+      </div>
+    </div>
+    <div class="form-group">
+      <label for="message" class="col-lg-2 control-label">Message</label>
+      <div class="col-lg-10">
+        <textarea
+          rows="5"
+          class="form-control font-sans"
+          id="message"
+          name="body"
+          required
+          style="min-height: 72pt;"
+        ></textarea>
+      </div>
+    </div>
+    <div class="form-group">
+      <div class="col-lg-10 col-lg-offset-2">
+        <button type="reset" class="btn btn-default">Cancel</button>
+        <button type="submit" class="btn btn-primary pageclip-form__submit">
+          <span>Submit</span>
+        </button>
+      </div>
+    </div>
+  </fieldset>
+</form>

content/posts/new-site.md

@@ -0,0 +1,7 @@
+---
+title: "New Site"
+date: 2022-01-13T19:09:50-06:00
+draft: true
+---
+
+I have a new website! Narf!

content/videos/_index.md

@@ -0,0 +1,23 @@
+---
+title: Videos
+cardImage: camera
+motto: Videography Portfolio
+description: Showcase of my own videos
+menu:
+  main:
+    params:
+      prefix: fad
+      icon: fa-video
+fa-thumbnail: fad fa-video
+---
+
+> ### The culmination of all art forms is that of film.
+
+A good film must have the plot and language of a good novel, characters as bold
+and stunning as sculpture, a rhythm as driving and delicate as poetry, frame
+compositions more stellar that those of photography, and music that speaks to
+the souls of both the characters on screen and the viewers off.
+
+But I digress. Most of my forays into the world of film are immortalized on
+[my Peertube channel](https://video.millironx.com/c/mix_studios/videos), but I
+decided to share a few highlights here. Enjoy!

content/videos/ag-olympics-reel/index.md

@@ -0,0 +1,14 @@
+---
+title: "Farm Bureau Ag Olympics Reel"
+date: 2017-02-16
+storage: yt
+storageId: jhLJp3OFsYM
+thumbnail: https://i.ytimg.com/vi_webp/jhLJp3OFsYM/maxresdefault.webp
+categories:
+  - video
+---
+
+The Albany County Farm Bureau Young Farmer's and Rancher's committee asked me to
+come and shoot a highlight reel of the Ag Olympics booth they ran at the Wyoming
+Football Wyoming Needs Agriculture Day. I gave away all rights to this one
+except for bragging rights.

content/videos/if-you-come-out-to-the-fair/index.md

@@ -0,0 +1,13 @@
+---
+title: If You Come Out to the Fair
+date: 2016-10-13
+storage: peertube
+storageId: 3a872dbf-4141-4bec-8a0c-11f5c1db2328
+thumbnail: https://video.millironx.com/lazy-static/previews/d1f33911-fdff-461d-a485-54de0bde79f3.jpg
+categories:
+  - video
+---
+
+My extension agent asked me to make a promotional video for our county fair.
+This is the only film of mine that has drawn an emotional response. I think I
+retired after this.

content/videos/in-the-hayfields/index.md

@@ -0,0 +1,14 @@
+---
+title: In The Hayfields
+date: 2015-10-05
+storage: peertube
+storageId: a755f140-123a-4435-8002-0da2d0c831e9
+thumbnail: https://video.millironx.com/lazy-static/previews/837d70cd-b5dc-48be-bc65-84a50ae29c99.jpg
+categories:
+  - video
+---
+
+I always get the comment that our implements are _old_ whenever I show this
+video off. I just ignore the naysayers, though, and good thing, too, because a
+version of this video won a [GoPro Award](https://gopro.com/awards). Still
+waiting to see my footage on their channel, though.

content/videos/non-verum/index.md

@@ -0,0 +1,16 @@
+---
+title: "Non. Verum: The Mystery Killer"
+date: 2015-06-12
+storage: peertube
+storageId: 03ac71e5-69b2-4c3d-b8b2-da98055cd953
+thumbnail: https://video.millironx.com/lazy-static/previews/6c479593-5bcf-4953-bbe5-99c4b4a87a79.jpg
+categories:
+  - video
+---
+
+My first ~~documentary~~ mockumentary. This film won 2{{< sup nd >}} place at
+the [2016 National 4-H Film Festival](http://4h.missouri.edu/filmfest4h/), and
+I've been told that it's more polished than the pieces done by the local TV
+stations. No one seems to think it's funny, though, so I'm not sure how
+successful it was. Please do me a favor and google **every** term you don't
+understand while watching it, and perhaps you'll fare better.

content/websites/_index.md

@@ -0,0 +1,18 @@
+---
+title: My Websites
+cardImage: eclipse
+motto: Websites
+description: List of websites that I have worked on
+menu:
+  main:
+    name: Websites
+    params:
+      prefix: fad
+      icon: fa-browser
+fa-thumbnail: fad fa-browser
+---
+
+I do occasionally build websites for myself and other people. Here is a list of
+websites I have contributed code to directly, in a vain attempt to gain each of
+them some
+[search engine cred](https://en.wikipedia.org/wiki/Search_engine_optimization).

content/websites/millironx/index.md

@@ -0,0 +1,13 @@
+---
+title: Milliron X
+date: 2022-03-01
+platform: Hugo
+platformIcon: fab fa-golang
+platformURL: https://gohugo.io/
+deployURL: https://millironx.com
+sourceURL: https://github.com/MillironX/millironx.github.io
+categories:
+  - web
+---
+
+Lo and behold: I made my own website!

content/websites/record-books/index.md

@@ -0,0 +1,16 @@
+---
+title: Albany County 4-H Record Books
+date: 2019-08-10
+platform: Plain ol' HTML5
+platformIcon: fab fa-html5
+platformURL: https://www.w3.org/html/
+deployURL: http://wyoming4h.org/albany4h/record-book
+sourceURL: https://github.com/MillironX/4h-record-books
+categories:
+  - web
+---
+
+I constructed this site to hold the record book helps of the rebellious Albany
+County, Wyoming. Due to the bureaucratic lag that it takes to update, it got
+updated just in time for Wyoming 4-H to ditch paper record books entirely. Oh,
+well.

default.nix

@@ -0,0 +1,9 @@
+{ pkgs ? import (fetchTarball "https://github.com/NixOS/nixpkgs/archive/994e2ef9e9c70b4dd7257f73452a94e871723685.tar.gz") {} }:
+
+pkgs.mkShell {
+  buildInputs = [
+    pkgs.hugo
+    pkgs.nodejs
+    pkgs.git-crypt
+  ];
+}

fonts/nunito-sans/README.md

@@ -1,30 +0,0 @@
-
-# nunito-sans_all
-
-The CSS and web font files to easily self-host “Nunito Sans” with subset "all".
-
-## Install
-
-`npm install --save @openfonts/nunito-sans_all`
-
-## Use
-
-Typefaces assume you’re using webpack to process CSS and files. Each typeface
-package includes all necessary font files (woff2, woff) and a CSS file with
-font-face declarations pointing at these files.
-
-You will need to have webpack setup to load css and font files. Many tools built
-with Webpack will work out of the box with Typefaces such as [Gatsby](https://github.com/gatsbyjs/gatsby)
-and [Create React App](https://github.com/facebookincubator/create-react-app).
-
-To use, simply require the package in your project’s entry file e.g.
-
-```javascript
-// Load Nunito Sans typeface
-require('@openfonts/nunito-sans_all')
-```
-
-Usage in SCSS:
-```scss
-@import "~@openfonts/nunito-sans_all/index.css";
-```