millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-22 18:59:55 +00:00
Code Issues Releases Packages Activity

Fix type to boolean for flags

Browse source
This commit is contained in:
ljmesi 2022-05-03 11:07:23 +02:00
parent 4b2a3789cd
commit 17039ebc6b
1 changed files with 6 additions and 10 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

14
nextflow_schema.json
View file

@ -431,26 +431,22 @@
}, },
"longread_hostremoval_index": { "longread_hostremoval_index": {
"type": "string", "type": "string",
"default": null "default": "None"
}, },
"save_minimap2_hostremoval_index": { "save_minimap2_hostremoval_index": {
"type": "string", "type": "boolean",
"default": "false",
"description": "Flag for publishing minimap2 host removal index" "description": "Flag for publishing minimap2 host removal index"
}, },
"save_minimap2_hostremoval_mapped": { "save_minimap2_hostremoval_mapped": {
"type": "string", "type": "boolean",
"default": "false",
"description": "Flag for publishinig bam file with all long reads mapped to a reference" "description": "Flag for publishinig bam file with all long reads mapped to a reference"
}, },
"save_samtools_unmapped_bam": { "save_samtools_unmapped_bam": {
"type": "string", "type": "boolean",
"default": "false",
"description": "Flag for publishing bam for reads that did not map to the host reference" "description": "Flag for publishing bam for reads that did not map to the host reference"
}, },
"save_minimap2_unmapped_fq": { "save_minimap2_unmapped_fq": {
"type": "string", "type": "boolean",
"default": "false",
"description": "Flag for publishing fastq files for reads that did not map to the host reference" "description": "Flag for publishing fastq files for reads that did not map to the host reference"
} }
} }