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136 commits 3 branches 4 tags 570 KiB
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Author SHA1 Message Date
Thomas A. Christensen II
62f5c4ea65
 		Update report generation to match new fixed effect format 2021-08-31 20:02:17 -05:00
Thomas A. Christensen II
683c48aa45
 		Bug fix for not calling propertynames 2021-08-31 19:46:02 -05:00
Thomas A. Christensen II
d4bb72c458
 		Revamp fixed-effect algorithm 2021-08-31 19:24:07 -05:00
Thomas A. Christensen II
4b66ad8b1f
 		Make column names more robust 2021-08-31 18:27:16 -05:00
Thomas A. Christensen II
91fc553c4c
 		Fix documentation syntax bugs 2021-08-29 08:08:23 -05:00
Thomas A. Christensen II
16aae0469e
 		Fix tests 2021-08-28 19:28:25 -05:00
Thomas A. Christensen II
97bd43323d
 		Convert wiki to docs 2021-08-28 19:25:17 -05:00
Thomas A. Christensen II
b4e0591ed2
 		Update badges to work on 'develop' branch 2021-08-28 18:11:20 -05:00
Thomas A. Christensen II
a9ab1e8641
 		Push pedigree matrix to its own function 2021-08-28 18:07:22 -05:00
Thomas A. Christensen II
3782de85ac
 		Mark beefblup CLI as Julia file 2021-08-09 21:06:21 -05:00
Thomas A. Christensen II
9036ace524
 		Remove uneeded test script file 2021-08-09 21:02:20 -05:00
Thomas A. Christensen II
c318ded0a6
 		Make Julia version correct in docs CI 2021-08-09 20:47:26 -05:00
Thomas A. Christensen II
74f15be400
 		New documentation CI approach 2021-08-09 20:46:18 -05:00
Thomas A. Christensen II
091b757b00
 		Add headless display server to CI 2021-08-09 19:57:32 -05:00
Thomas A. Christensen II
a1d4e6b063
 		Fix documentation CI 2021-08-09 19:31:25 -05:00
Thomas A. Christensen II
79e158d83e
 		Merge tag 'v0.2.2' into develop 
New methods for making GitHub recognize beefblup as a Julia program
 2021-08-09 19:11:52 -05:00
Thomas A. Christensen II
94a2e2e124 Merge branch 'hotfix/v0.2.2' v0.2.2 
Last GitHub fix didn't take
 2021-08-09 19:10:04 -05:00
Thomas A. Christensen II
f7f09cec90
 		Declare beefblup.jl as Julia using Emacs modeline 2021-08-09 19:09:45 -05:00
Thomas A. Christensen II
12e95d4a7a
 		Declare all jl files as Julia regardless of shebang 2021-08-09 19:09:28 -05:00
Thomas A. Christensen II
7b7ab22123
 		Bump version number 2021-08-09 19:08:42 -05:00
Thomas A. Christensen II
cc97c99a68 Merge tag 'v0.2.1' into develop 
Fix GitHub's language detection
 2021-08-09 19:00:35 -05:00
Thomas A. Christensen II
a6bd3d7a29 Merge branch 'hotfix/v0.2.1' v0.2.1 
Fix GitHub's language-detection for beefblup
 2021-08-09 18:59:50 -05:00
Thomas A. Christensen II
489274d557
 		Bump version number 2021-08-09 18:59:09 -05:00
Thomas A. Christensen II
66fc4b902f
 		Mark beefblup as Julia on GitHub 2021-08-09 18:57:09 -05:00
Thomas A. Christensen II
5e1c5f7707 Merge branch 'master' into develop 
CI from GitHub workflows must be performed in 'master' branch, even
though the work most directly affected the 'develop' branch.
 2021-08-09 18:33:30 -05:00
Thomas A. Christensen II
27199ea748
 		Update Documentation.yml 2021-07-07 09:47:05 -05:00
Thomas A. Christensen II
e18afb68df
 		Update Documentation.yml 2021-07-07 09:46:08 -05:00
Thomas A. Christensen II
3f55072ecd
 		Fix type 2021-07-07 09:43:57 -05:00
Thomas A. Christensen II
15bdebb17d
 		Create Documentation.yml 2021-07-07 09:42:20 -05:00
Thomas A. Christensen II
d87ee85795
 		Set docs to correct place [ci skip] 2021-07-07 09:35:40 -05:00
Thomas A. Christensen II
b3162345ff
 		Make docs point to this repository 2021-07-07 09:33:10 -05:00
Thomas A. Christensen II
c3d905ff5e
 		More Travis GUI updates 2021-06-19 20:56:14 -05:00
Thomas A. Christensen II
615766901c
 		Try adding GUI to Travis config 
https://stackoverflow.com/a/37330054/3922521
 2021-06-19 20:34:51 -05:00
Thomas A. Christensen II
d9fde2af8f
 		Enable TravisCI 2021-06-19 20:15:40 -05:00
Thomas A. Christensen II
141cf56b07
 		Add basic test for correct fixed effect matrix 2021-06-19 20:11:25 -05:00
Thomas A. Christensen II
181819db28
 		Refactor fixed effect solver into its own function 2021-06-19 19:56:32 -05:00
Thomas A. Christensen II
f5f1dfad13
 		Remove reference to blue coding style 2021-06-19 19:28:05 -05:00
Thomas A. Christensen II
7ce74be4d4
 		Merge branch 'pkg-template' into develop 2021-06-19 19:24:46 -05:00
Thomas A. Christensen II
0a537f9928
 		Run Julia template engine for CI purposes 2021-06-19 19:16:34 -05:00
Thomas A. Christensen II
95fd34ce3a
 		Bootstrap testing framework 2021-06-19 18:49:00 -05:00
Thomas A. Christensen II
93564b247e
 		Reformat document 2021-06-19 18:27:52 -05:00
Thomas A. Christensen II
289984be2f
 		Fix running without arguments 2021-06-19 16:13:07 -05:00
Thomas A. Christensen II
6e311141ac
 		Create debug config 2021-06-19 11:54:51 -05:00
Thomas A. Christensen II
fa42f3635f
 		Remove debug info from cli 2021-06-19 11:54:34 -05:00
Thomas A. Christensen II
5c5ac1654c
 		Add argument parsing to cli 2021-06-19 11:50:26 -05:00
Thomas A. Christensen II
1885aa15ef
 		Fix results file name creation 2021-06-19 11:50:02 -05:00
Thomas A. Christensen II
530258a2c8
 		Qualify column deletion function 2021-06-19 11:07:13 -05:00
Thomas A. Christensen II
9b181d251c
 		Update deprecated column deletion syntax 2021-06-19 11:05:02 -05:00
Thomas A. Christensen II
610c80e7c9
 		Use Julia error/warn systems instead of printing to stdout 2021-06-19 10:01:51 -05:00
Thomas A. Christensen II
f985f4a700
 		Remove verbose text output 2021-06-18 15:27:18 -05:00