ameynert
|
70e3eafeb1
|
Merge pull request #6 from nf-core/master
Merge base repository into fork
|
2 years ago |
|
Matthias De Smet
|
ec190ac013
|
Update conf/vsc_ugent.config
Co-authored-by: nvnieuwk <101190534+nvnieuwk@users.noreply.github.com>
|
2 years ago |
|
Matthias De Smet
|
81c5857c51
|
Update vsc_ugent.config
|
2 years ago |
|
Athanasios Baltzis
|
002fc84362
|
Add crg custom config file and update nfcore_custom.config
|
2 years ago |
|
Athanasios Baltzis
|
7547fba92e
|
Add proteinfold-specific CRG config
|
2 years ago |
|
Alexander Peltzer
|
c40faeb95e
|
Merge pull request #312 from nf-core/kevbrick-patch-1
Update nihbiowulf.config - set standard profile to slurm
|
2 years ago |
|
Alexander Peltzer
|
c2710b1b63
|
Merge branch 'master' into varskip_designs
|
2 years ago |
|
Alexander Peltzer
|
211a1bcb73
|
Merge branch 'master' into kevbrick-patch-1
|
2 years ago |
|
chriswyatt1
|
9b971c2b76
|
Ucl_myriad
|
2 years ago |
|
Matthias De Smet
|
adbf728ce5
|
vsc_ugent: limit queuesize
|
2 years ago |
|
Praveen Raj S
|
f200f6ab44
|
Disable mounting of KI lab folders
Do not mount KI lab folders. The drives are not used anymore.
|
2 years ago |
|
Edmund Miller
|
0cabf67b61
|
feat(demultiplex): Add optimized transfers for bases2fastq
|
2 years ago |
|
Lewis Quayle
|
755862fc61
|
Merge branch 'nf-core:master' into sbc_sharc
|
2 years ago |
|
Giuseppe Martone
|
64fec62a6d
|
Merge branch 'master' into master
|
2 years ago |
|
Giuseppe Martone
|
e37bccc9d8
|
Update tigem.config
|
2 years ago |
|
Alexander Peltzer
|
a9781042c7
|
Merge pull request #392 from nf-core/custom-mag-eva
Fix python related seg faults mag@eva
|
2 years ago |
|
Alexander Peltzer
|
0d8471a082
|
Merge pull request #421 from Puumanamana/master
University of Hawaii at Manoa's HPCC config
|
2 years ago |
|
Alexander Peltzer
|
8b68ffce89
|
Merge branch 'master' into custom-mag-eva
|
2 years ago |
|
Phil Ewels
|
e78d941105
|
Merge branch 'master' into ccga_beegfs_update
|
2 years ago |
|
Marc Hoeppner
|
e5b798e21f
|
Updating CCGA med to use the new Beegfs file system
|
2 years ago |
|
Giuseppe Martone
|
ce39096f32
|
Create tigem.config
|
2 years ago |
|
lquayle88
|
584052cfff
|
Revised base and all pipeline configs to provide memory on per core basis
|
2 years ago |
|
lquayle88
|
3f2ffa314d
|
Revised base and sarek configs to provide memory on per core basis
|
2 years ago |
|
Cedric
|
d429a59a0d
|
add automounts for singularity
|
2 years ago |
|
Cedric Arisdakessian
|
c479780d8f
|
create mana config
|
2 years ago |
|
lquayle88
|
e7ac3ecd19
|
Modified resource requests in sbc_sharc.config for sarek
|
2 years ago |
|
lquayle88
|
9b451b53b7
|
Increased cpus and memory for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek
|
2 years ago |
|
lquayle88
|
10c1490265
|
Increased memory and time for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek
|
2 years ago |
|
lquayle88
|
dbb3b3b44b
|
Reinstated maxRetries and increased memory for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek
|
2 years ago |
|
lquayle88
|
8103718389
|
Reduced maxRetries upon error in sbc_sharc.config for sarek
|
2 years ago |
|
Lewis Quayle
|
1eea9b464a
|
Merge branch 'nf-core:master' into sbc_sharc
|
2 years ago |
|
Bruno Grande
|
735df9ef76
|
Merge branch 'master' into bgrande/sage-improve-downloads
|
2 years ago |
|
Patrick Hüther
|
51ae760889
|
Merge pull request #413 from phue/biohpc_charliecloud_patch
biohpc_gen: update required modules
|
2 years ago |
|
Lewis Quayle
|
e89114df8d
|
Merge branch 'nf-core:master' into sbc_sharc
|
2 years ago |
|
lquayle88
|
c42a5a9a94
|
Updated resources requested by pipelines
|
2 years ago |
|
lquayle88
|
ab1ad832df
|
Updated resource requests for compatibility with high memory nodes
|
2 years ago |
|
Simon Pearce
|
17c3767fef
|
Update crukmi.config
Fix the singularity cache dir and add process_single.
|
2 years ago |
|
Lewis Quayle
|
7541ffb666
|
Merge branch 'nf-core:master' into sbc_sharc
|
2 years ago |
|
lquayle88
|
7e34beb3c9
|
Updated resource requests for compatibility with general worker nodes
|
2 years ago |
|
Adrija Kalvisa
|
7959b14385
|
Merge branch 'nf-core:master' into master
|
2 years ago |
|
Austyn Trull
|
5400df135d
|
Merge pull request #412 from nf-core/cheaha_env_variable_updates
Fix cheaha config due to use of incorrect variable
|
2 years ago |
|
lquayle88
|
1471257aaf
|
Modified config for job submit rate
|
2 years ago |
|
Lewis Quayle
|
9ee0bdc580
|
Merge branch 'nf-core:master' into sbc_sharc
|
2 years ago |
|
lquayle88
|
adc88cfa1f
|
Added config for limiting queue size and job submit rate
|
2 years ago |
|
Patrick Hüther
|
85aa6adeed
|
Merge branch 'master' into biohpc_charliecloud_patch
|
2 years ago |
|
ggabernet
|
c709be3b59
|
update cfc config maintenance
|
2 years ago |
|
Bruno Grande
|
8bb9361359
|
Improve reliability of file transfers
|
2 years ago |
|
lquayle88
|
55971bb94d
|
Modularised error handling strategy to per pipeline basis
|
2 years ago |
|
James A. Fellows Yates
|
ec638e62de
|
Apply suggestions from code review
Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com>
|
2 years ago |
|
James A. Fellows Yates
|
b8751af6c6
|
Update conf/pipeline/mag/eva.config
|
2 years ago |