pierrespc
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035ab61f61
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added unlimitedtime profile to maestro; changed cache for bwa process
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2021-10-08 09:05:46 +02:00 |
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pierrespc
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1621585558
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improving documentation
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2021-10-04 16:08:33 +02:00 |
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pierrespc
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e5d4a357c5
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clean doc
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2021-10-04 15:08:01 +02:00 |
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pierrespc
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f6266879d6
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edited maestronuclear and maestromitocondrial configs. The latter has not been optimized yet
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2021-09-29 13:47:35 +02:00 |
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pierrespc
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b71df6fe57
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renamed eager pipeline config file
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2021-09-29 13:22:07 +02:00 |
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pierrespc
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9ea3e2096a
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long and normal qos profiles defined now in an unique maestro config file. maestro.config also defined in pipeline/eager for ressources assignation to specific processes
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2021-09-29 13:11:14 +02:00 |
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pierrespc
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3e22b85b02
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maestro only for normal qos
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2021-09-22 10:13:46 +02:00 |
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pierrespc
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3b593d46ec
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merged two pasteur config files for maestro
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2021-09-20 15:14:50 +02:00 |
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pierrespc
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4614ff6f45
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change max mem in Normal
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2021-09-16 16:50:45 +02:00 |
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pierrespc
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de2a745fde
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change type in Normal name
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2021-09-16 16:48:26 +02:00 |
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pierrespc
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482e7cf8de
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2 config files for Maestro HPC at Pasteur Institute, Paris
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2021-09-16 12:40:56 +02:00 |
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Marc Trunjer Kusk Nielsen
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a55c3c04eb
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Update computerome.config
Adding genomes and modules back into schema_ingore_params to avoid warnings about unexpected parameters.
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2021-09-15 19:54:51 +02:00 |
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Marc Trunjer Kusk Nielsen
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8b29b5584e
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Update computerome.config
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2021-09-15 14:20:02 +02:00 |
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Marc Trunjer Kusk Nielsen
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ab8a9ad0b8
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Update computerome.config
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2021-09-15 13:27:23 +02:00 |
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Marc Trunjer Kusk Nielsen
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aad70fe86d
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Merge branch 'nf-core:master' into computerome
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2021-09-15 11:08:48 +02:00 |
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Marc Trunjer Kusk Nielsen
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29003e13f1
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Update computerome.config
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2021-09-15 10:22:57 +02:00 |
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James A. Fellows Yates
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a7b1183065
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Remove 1CPU for host removal fastq
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2021-09-14 11:52:21 +02:00 |
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Marc Trunjer Kusk Nielsen
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86e21b378a
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Update computerome.config
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2021-09-13 14:26:10 +02:00 |
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Marc Trunjer Kusk Nielsen
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275288632d
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Update computerome.config
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2021-09-13 14:22:22 +02:00 |
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Marc Trunjer Kusk Nielsen
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366f945a40
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Update computerome.config
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2021-09-13 14:20:55 +02:00 |
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Marc Trunjer Kusk Nielsen
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8ebdd43898
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Update computerome.config
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2021-09-13 14:01:35 +02:00 |
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Marc Trunjer Kusk Nielsen
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1071eb9d2e
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Update computerome.config
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2021-09-13 13:38:46 +02:00 |
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Marc Trunjer Kusk Nielsen
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2e515dc861
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Update computerome.config
Don't raise an error when --project is specified
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2021-09-13 13:38:25 +02:00 |
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Marc Trunjer Kusk Nielsen
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e5cba18c9b
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Update computerome.config
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2021-09-13 13:28:33 +02:00 |
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Marc Trunjer Kusk Nielsen
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0327ef40ea
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Update computerome.config
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2021-09-13 13:20:57 +02:00 |
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Marc Trunjer Kusk Nielsen
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a0ba05fd99
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Update computerome.config
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2021-09-13 08:36:30 +02:00 |
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Marc Trunjer Kusk Nielsen
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84f94d92c4
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Update computerome.config
Added a way to use `--project` to provide project information to the scheduler. Inspired by the uppmax config
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2021-09-10 15:10:19 +02:00 |
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Marc Trunjer Kusk Nielsen
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463df26c72
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Merge branch 'nf-core:master' into computerome
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2021-09-10 14:47:05 +02:00 |
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James A. Fellows Yates
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7c639ac934
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Bump lib merge further
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2021-09-09 14:47:20 +02:00 |
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James A. Fellows Yates
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0603aba342
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Remove debugging stuff
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2021-09-09 13:54:01 +02:00 |
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James A. Fellows Yates
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c799784629
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Merge pull request #273 from jfy133/mpcdf-fix
Add auto-cleanup for MPCDF
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2021-09-09 13:41:29 +02:00 |
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James A. Fellows Yates
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d479926c7f
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Update mpcdf.config
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2021-09-09 13:33:56 +02:00 |
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James A. Fellows Yates
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7ec12b6736
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Update eva.config
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2021-09-09 13:10:05 +02:00 |
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James A. Fellows Yates
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96e26a5411
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Merge pull request #272 from jfy133/eva-eager-subprofiles
Bump additional library merge memory for eager @ EVA
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2021-09-08 15:25:07 +02:00 |
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James A. Fellows Yates
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4286a3a342
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Bump additional library merge memor
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2021-09-08 15:16:40 +02:00 |
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Rogan Grant
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a7aca37bc8
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Set autoMounts to true
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2021-09-06 15:15:46 -05:00 |
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Rogan Grant
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b56b7b310b
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Merge pull request #266 from RoganGrant/master
Northwestern University Genomics Nodes (new add)
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2021-09-06 13:26:49 -05:00 |
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James A. Fellows Yates
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39f54db097
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Update container cache
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2021-09-05 12:09:02 +02:00 |
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James A. Fellows Yates
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59a0901b68
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Add library merge steps to have overhead
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2021-09-05 12:07:53 +02:00 |
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Rogan Grant
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54298ca0f7
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Merge branch 'nf-core:master' into master
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2021-09-04 15:37:03 -05:00 |
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rogangrant
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a8d06ee356
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Revert "Forgot a slash :("
This reverts commit d5601fea84 .
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2021-09-04 15:36:05 -05:00 |
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Rogan Grant
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d5601fea84
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Forgot a slash :(
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2021-09-04 15:19:32 -05:00 |
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Rogan Grant
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2c5e454d16
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Updated iGenomes path for odd local structure on Quest
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2021-09-04 15:13:41 -05:00 |
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Marc Trunjer Kusk Nielsen
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1bf2d436d4
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Update computerome.config
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2021-09-01 22:21:31 +02:00 |
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Marc Trunjer Kusk Nielsen
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e2d54cb56c
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Update computerome.config
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2021-09-01 22:06:56 +02:00 |
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Marc Trunjer Kusk Nielsen
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a1413ce18e
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Update computerome.config
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2021-09-01 21:47:48 +02:00 |
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Marc Trunjer Kusk Nielsen
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d4c71f0d8d
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Update computerome.config
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2021-09-01 13:22:31 +02:00 |
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Marc Trunjer Kusk Nielsen
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fdac67afbf
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Create computerome.config
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2021-08-31 13:58:39 +02:00 |
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James A. Fellows Yates
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94cbb031c6
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Update eva.config
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2021-08-30 13:29:44 +02:00 |
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James A. Fellows Yates
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5fbd938bc1
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Export user env too
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2021-08-27 10:08:20 +02:00 |
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