ameynert
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29a0b30d85
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Updated process names to Sarek 3
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2022-09-07 16:00:52 +01:00 |
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ameynert
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d84754d328
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Merge pull request #5 from nf-core/master
Merge in from base repository
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2022-09-07 15:45:08 +01:00 |
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Bruno Grande
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47fa890ad7
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Merge pull request #407 from Sage-Bionetworks-Workflows/bgrande/sage-aws
Improve AWS-related config for Sage profile
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2022-09-01 13:29:49 -07:00 |
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Bruno Grande
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80831358f9
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Merge branch 'master' into bgrande/sage-aws
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2022-09-01 13:21:36 -07:00 |
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Simon Pearce
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6b83603325
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Merge pull request #400 from SPPearce/crukmi
Cancer Research UK Manchester Institute config
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2022-09-01 14:01:00 +01:00 |
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SPearce
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a142ad7eae
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Added link to Sarek specific documentation
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2022-09-01 13:55:08 +01:00 |
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SPearce
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5981b643c5
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Updated the sarek pipeline config
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2022-09-01 11:47:12 +01:00 |
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Simon Pearce
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2c738cae33
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Update crukmi.config
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2022-09-01 11:24:11 +01:00 |
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Simon Pearce
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a8faeda141
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Update crukmi.config
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2022-09-01 11:23:07 +01:00 |
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SPearce
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800931bff2
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Add Sarek specific config
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2022-09-01 11:13:23 +01:00 |
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Simon Pearce
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ba1d3f24cc
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Update crukmi.config
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2022-09-01 11:07:14 +01:00 |
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Simon Pearce
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897d0a188b
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Update nfcore_custom.config
Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
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2022-09-01 10:32:43 +01:00 |
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Simon Pearce
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df685f4f0f
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Merge branch 'master' into crukmi
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2022-09-01 10:29:08 +01:00 |
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James A. Fellows Yates
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3664b4812d
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Merge pull request #411 from nf-core/docs-improvement
Add documentation for when you need to use an environmental variable
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2022-09-01 11:24:31 +02:00 |
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Simon Pearce
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81768e16a9
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Merge branch 'nf-core:master' into crukmi
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2022-09-01 10:20:25 +01:00 |
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James A. Fellows Yates
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5769927bbc
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Merge branch 'master' into docs-improvement
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2022-09-01 11:15:10 +02:00 |
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Maxime U. Garcia
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ebcc3d278f
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Merge pull request #410 from nf-core/chear-var-fix
Fix cheaha config due to use of environmental variable
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2022-09-01 11:13:37 +02:00 |
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James Fellows Yates
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51f0359b3d
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Add documentation for when you need to use an environmental variable
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2022-09-01 11:12:15 +02:00 |
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Simon Pearce
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14a97ad0e8
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Merge branch 'master' into crukmi
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2022-09-01 10:07:24 +01:00 |
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James Fellows Yates
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b22e8b79c7
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Fix cheaha config due to use of environmental variable
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2022-09-01 11:01:23 +02:00 |
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ameynert
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69468e7ca7
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Merge pull request #409 from kalayaneech/master
A new profile for adcra [KMUTT]
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2022-09-01 09:55:12 +01:00 |
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ameynert
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28e59e38b4
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Run prettier
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2022-09-01 09:28:05 +01:00 |
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Kalayanee Chairat
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8e275182ea
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Update main.yml
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2022-09-01 15:16:56 +07:00 |
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Kalayanee Chairat
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bf2ab39ea0
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Update README.md
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2022-09-01 15:15:51 +07:00 |
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Kalayanee Chairat
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9681716205
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Update adcra.config
Fixing typo
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2022-09-01 15:11:18 +07:00 |
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Kalayanee Chairat
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700f14d828
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Merge pull request #1 from nf-core/master
Merging from master
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2022-09-01 15:07:43 +07:00 |
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Simon Pearce
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864da0b5be
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Merge branch 'master' into crukmi
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2022-08-31 18:19:47 +01:00 |
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Bruno Grande
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9a37404a04
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Merge branch 'master' into bgrande/sage-aws
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2022-08-31 09:22:07 -07:00 |
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Bruno Grande
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179b343bd2
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Incorporate resource limits
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2022-08-31 09:18:27 -07:00 |
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Bruno Grande
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c883723559
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Simplify resource adjustments
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2022-08-31 09:10:30 -07:00 |
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SPearce
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1e1ca1e96b
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Incorporating executor options
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2022-08-31 15:35:57 +01:00 |
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Annick Renevey
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bfeafdbf25
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Merge pull request #408 from nf-core/rnafusion_config_hasta
rnafusion setup for hasta usage [WIP]
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2022-08-31 14:36:08 +02:00 |
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Annick Renevey
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242101db16
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fix extra space
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2022-08-31 14:26:32 +02:00 |
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Annick Renevey
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0851903f66
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include new config in pipeline configs file
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2022-08-31 14:19:07 +02:00 |
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Annick Renevey
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51871ea6fc
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rnafusion setup for hasta usage
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2022-08-31 11:32:01 +02:00 |
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Lara Ianov
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08b62ede83
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Merge pull request #404 from nf-core/cheaha_singularity_update
Cheaha Config Update
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2022-08-30 14:45:50 -05:00 |
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Austyn Trull
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90f638d376
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Updating the cheaha documentation to clarify that /data/temporary-scratch/atrull will be used as storage for files that would normally go into one of the temporary locations when using Singularity
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2022-08-29 10:47:46 -05:00 |
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James A. Fellows Yates
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b33aef1431
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Merge pull request #386 from andrewfrank/patch-2
Update google.config to fix custom VM memory error
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2022-08-29 08:30:39 +02:00 |
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James A. Fellows Yates
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c70a95f9c9
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Merge branch 'master' into patch-2
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2022-08-29 08:23:31 +02:00 |
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Bruno Grande
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9c8cb71bc7
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Merge branch 'master' into bgrande/sage-aws
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2022-08-25 16:29:20 -07:00 |
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Bruno Grande
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317e5a16cb
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Improve AWS-related config for Sage profile
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2022-08-25 16:24:52 -07:00 |
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Harshil Patel
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84b0b705a2
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Merge pull request #405 from drpatelh/monkeypox
Replace NC_063383.1 fasta and gff and add Nextclade config
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2022-08-25 12:57:43 +01:00 |
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kalayaneech
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93c4ba67a0
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adding adcra configuration
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2022-08-25 16:17:09 +07:00 |
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Harshil Patel
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8b9661825b
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Replace NC_063383.1 fasta and gff and add Nextclade config
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2022-08-24 15:21:44 +01:00 |
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Harshil Patel
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d71e31c378
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Merge pull request #403 from drpatelh/monkeypox
Add monkeypox genome files to viralrecon genome config file
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2022-08-24 12:16:21 +01:00 |
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Harshil Patel
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8dcfcfd856
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Add monkeypox genome files to viralrecon genome config file
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2022-08-24 12:13:17 +01:00 |
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Austyn Trull
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8d5ae4c3ab
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Committing changes made by Brandon Wilk so that singularity containers will use scratch space
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2022-08-23 15:30:13 -05:00 |
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Ramprasad Neethiraj
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49c71e0c28
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Merge pull request #363 from ramprasadn/feat/hasta_update
Add a profile for stubruns in hasta
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2022-08-23 22:14:18 +02:00 |
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Ramprasad Neethiraj
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9182b55acc
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Merge branch 'master' into feat/hasta_update
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2022-08-23 11:21:58 +02:00 |
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Anders Jemt
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9c26cfddaa
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Merge pull request #390 from raysloks/feat/hasta_java_memory_fix
Feat/hasta java memory fix
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2022-08-22 15:46:39 +02:00 |
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