James A. Fellows Yates
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46fba9c597
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Update eva.config
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2022-06-03 21:10:48 +02:00 |
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James A. Fellows Yates
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05cc8a08f1
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Update eva.config
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2022-06-03 21:08:19 +02:00 |
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James Fellows Yates
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9ef52af084
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Increase overhead
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2022-06-03 14:24:27 +02:00 |
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James Fellows Yates
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c40ebb9acf
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Add overhead for get_software_versions
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2022-06-03 14:21:41 +02:00 |
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James Fellows Yates
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df0429ce9d
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Replace oracle specific _JAVA_OPTIONS to portable JAVA_TOOLS_OPTIONS
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2022-06-03 14:20:39 +02:00 |
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Thiseas C. Lamnidis
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d09f5fc116
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Update eva.config
eigenstrat_snp_coverage also loads pandas
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2022-05-06 15:12:04 +02:00 |
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Thiseas C. Lamnidis
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209601f782
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missing bracket
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2022-05-04 13:08:13 +02:00 |
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Thiseas C. Lamnidis
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a42c4344ad
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Exclude bionode 06 for software versions
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2022-05-03 18:30:42 +02:00 |
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Thiseas C. Lamnidis
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79e227aa4e
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Update eva.config
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2022-05-03 16:42:21 +02:00 |
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Thiseas C. Lamnidis
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085726d081
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Update eva.config
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2022-05-03 16:36:05 +02:00 |
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Thiseas C. Lamnidis
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4592969613
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memory for get_software_versions in MB.
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2022-05-03 16:30:04 +02:00 |
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Thiseas C. Lamnidis
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79ad571319
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Update eva.config
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2022-05-03 16:25:48 +02:00 |
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Thiseas C. Lamnidis
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04226692fe
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Update eva.config
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2022-05-03 16:21:35 +02:00 |
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Thiseas C. Lamnidis
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57095fe79f
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Update eva.config
Set max heap size for java jobs in `get_software_versions`.
Limited OpenBLAS threading for python jobs that use numpy/pandas.
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2022-05-03 16:12:20 +02:00 |
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James A. Fellows Yates
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b5d9b79377
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Merge branch 'nf-core:master' into master
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2022-05-02 13:59:18 +02:00 |
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James A. Fellows Yates
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bf658abc77
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Update eva.config
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2022-05-02 13:59:13 +02:00 |
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James A. Fellows Yates
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c1425c6c01
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Merge pull request #364 from jfy133/eva-update
Update eager @ eva.config to allow retry on post-processing FASTQ
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2022-04-22 11:47:10 +02:00 |
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James A. Fellows Yates
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a086878c0b
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Update eva.config
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2022-04-22 10:47:04 +02:00 |
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James A. Fellows Yates
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44238471cf
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Update eva.config
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2022-03-31 13:12:50 +02:00 |
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James Fellows Yates
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2277b541a3
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Re-add bash bin specification
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2022-03-31 11:06:53 +02:00 |
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James A. Fellows Yates
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8ad4ddac6a
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Merge branch 'master' into fix-eva
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2022-03-29 12:50:54 +02:00 |
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James Fellows Yates
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3d2a612b39
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Remove setting of bash in clusterOotions
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2022-03-29 12:48:37 +02:00 |
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James A. Fellows Yates
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1b5037ce5e
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Update eva.config
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2022-03-15 07:49:06 +01:00 |
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James A. Fellows Yates
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1565b2ce63
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Update eva.config
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2022-03-15 07:42:23 +01:00 |
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James A. Fellows Yates
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f725b6c431
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Apply suggestions from code review
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2022-03-15 07:36:34 +01:00 |
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James A. Fellows Yates
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4670f8bf0c
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Update eva.config
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2022-03-14 14:56:01 +01:00 |
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James A. Fellows Yates
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975fca6721
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Apply suggestions from code review
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2022-03-07 13:51:00 +01:00 |
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James Fellows Yates
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70318c3b2a
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Tweak eager settigs
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2022-03-03 14:29:30 +01:00 |
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ilight1542
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25c644abb7
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modified mpcdf configs (general + eager)
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2022-03-03 13:55:02 +01:00 |
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James A. Fellows Yates
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5547e45ab5
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Merge branch 'master' into jfy133-patch
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2022-03-02 08:28:22 +01:00 |
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James A. Fellows Yates
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46f046d477
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Update eva.config
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2022-02-28 14:00:37 +01:00 |
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James Fellows Yates
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88ddc9eee7
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fffff
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2022-02-10 11:34:57 +01:00 |
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James Fellows Yates
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d7d0f5cecc
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Change base time
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2022-02-10 11:32:49 +01:00 |
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James Fellows Yates
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dbd78f8075
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Re add .
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2022-02-10 11:26:18 +01:00 |
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James Fellows Yates
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dd94895f16
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remove quotes
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2022-02-10 11:22:45 +01:00 |
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James Fellows Yates
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39c2d9b25b
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Oops
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2022-02-10 11:19:16 +01:00 |
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James Fellows Yates
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c0ee3225ad
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Add times for 365d
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2022-02-10 11:02:52 +01:00 |
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Thiseas C. Lamnidis
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fa4075c2a0
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Removed all time limits
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2022-02-10 10:00:18 +01:00 |
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James A. Fellows Yates
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2b06293f64
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Read add empty BAM exit code for qualitmap 255
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2022-02-08 11:15:17 +01:00 |
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James A. Fellows Yates
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8c5a54ac9f
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Update conf/pipeline/eager/eva.config
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2022-02-06 19:37:53 +01:00 |
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James A. Fellows Yates
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aa525c6ebf
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Allow exit code 1 retry for all java processes
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2022-02-06 09:07:53 +01:00 |
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James A. Fellows Yates
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81fe720b00
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Update eva.config
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2022-02-04 09:31:33 +01:00 |
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James A. Fellows Yates
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86a9042eac
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Update eva.config
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2022-02-04 09:25:01 +01:00 |
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James A. Fellows Yates
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50aafc6410
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Update eva.config
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2022-02-03 17:03:10 +01:00 |
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James A. Fellows Yates
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e02196d6ad
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Update eva.config
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2022-02-03 17:02:34 +01:00 |
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James A. Fellows Yates
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0e41349324
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Update eva.config
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2022-02-03 17:01:54 +01:00 |
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James Fellows Yates
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2562a2f563
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Remove virtual free
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2022-02-02 08:06:00 +01:00 |
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James A. Fellows Yates
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8739aabbf0
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Bump markduplicates by default
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2022-02-02 08:00:13 +01:00 |
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James A. Fellows Yates
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5fd5c43906
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Update eva.config
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2022-01-14 07:03:05 +01:00 |
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James A. Fellows Yates
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55f452d81e
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Update eva.config
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2021-12-07 09:27:28 +01:00 |
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