Rogan Grant
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2c5e454d16
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Updated iGenomes path for odd local structure on Quest
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2021-09-04 15:13:41 -05:00 |
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Marc Trunjer Kusk Nielsen
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1bf2d436d4
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Update computerome.config
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2021-09-01 22:21:31 +02:00 |
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Marc Trunjer Kusk Nielsen
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e2d54cb56c
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Update computerome.config
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2021-09-01 22:06:56 +02:00 |
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Marc Trunjer Kusk Nielsen
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a1413ce18e
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Update computerome.config
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2021-09-01 21:47:48 +02:00 |
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Marc Trunjer Kusk Nielsen
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d4c71f0d8d
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Update computerome.config
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2021-09-01 13:22:31 +02:00 |
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Marc Trunjer Kusk Nielsen
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06632d541d
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Update main.yml
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2021-08-31 14:35:24 +02:00 |
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Marc Trunjer Kusk Nielsen
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e576b1a7dd
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Update README.md
Add computerome
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2021-08-31 14:32:56 +02:00 |
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Marc Trunjer Kusk Nielsen
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a641284533
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Update nfcore_custom.config
Add computerome to profiles
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2021-08-31 14:12:24 +02:00 |
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Marc Trunjer Kusk Nielsen
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aad2486215
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Create computerome.md
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2021-08-31 14:10:19 +02:00 |
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Marc Trunjer Kusk Nielsen
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fdac67afbf
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Create computerome.config
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2021-08-31 13:58:39 +02:00 |
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James A. Fellows Yates
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94cbb031c6
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Update eva.config
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2021-08-30 13:29:44 +02:00 |
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Patrick Hüther
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6c4998fa8a
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reduce max_memory to 1.8TB
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2021-08-27 14:01:34 +02:00 |
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James A. Fellows Yates
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5fbd938bc1
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Export user env too
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2021-08-27 10:08:20 +02:00 |
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Phil Ewels
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3d77ffdf55
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Merge pull request #230 from nf-core/docs-custom_config_base
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2021-08-23 19:34:30 +02:00 |
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James A. Fellows Yates
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bcb844f896
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Merge pull request #268 from jfy133/master
Delete SHH profiles due to decommissioning
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2021-08-23 14:08:13 +02:00 |
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James A. Fellows Yates
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e8bb6d0dab
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Merge pull request #267 from jfy133/eva-eager-subprofiles
Add genotyping_ug to SGE fixes for EAGER @ EVA
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2021-08-20 10:22:16 +02:00 |
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James Fellows Yates
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f41cb5986f
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remove from testing
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2021-08-20 10:18:04 +02:00 |
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James Fellows Yates
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59af7f0eee
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Delete SHH profiles due to decommissioning
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2021-08-20 10:15:39 +02:00 |
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James A. Fellows Yates
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6701354060
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Add genotyping_ug to SGE fixes
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2021-08-20 10:11:11 +02:00 |
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James A. Fellows Yates
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5c9896b687
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Merge pull request #265 from jfy133/eva-eager-subprofiles
eva/eager: Try new strategy for SGE and Java incompatibility
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2021-08-04 10:43:14 +02:00 |
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James Fellows Yates
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b0e344846d
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Changes after code review from @aidaanva
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2021-08-04 10:37:49 +02:00 |
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James Fellows Yates
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76fc461670
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Try new strategy for SGE/JAVA bs
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2021-08-04 10:14:56 +02:00 |
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Rogan Grant
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f793ffaace
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Updated iGenomes location
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2021-08-03 15:10:54 -05:00 |
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James A. Fellows Yates
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0c3428f5d1
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Merge pull request #263 from jfy133/master
eager @ eva
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2021-08-03 14:20:50 +02:00 |
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James A. Fellows Yates
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00491de038
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Update eva.config
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2021-08-03 13:54:14 +02:00 |
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Rogan Grant
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079258ebbb
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Minor text edits
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2021-07-29 11:38:40 -05:00 |
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Rogan Grant
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482478878d
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Added instructions for module loading
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2021-07-28 18:11:10 -05:00 |
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Rogan Grant
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24a2949fe2
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Had executor options in wrong spot :(
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2021-07-28 18:05:45 -05:00 |
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Rogan Grant
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6862fb8bfd
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testing ternary operatory
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2021-07-28 18:01:03 -05:00 |
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Rogan Grant
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bcc69fe83c
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Enable use of himem nodes
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2021-07-28 17:54:51 -05:00 |
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Rogan Grant
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ac11ca5568
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Remove echo used for testing
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2021-07-28 16:48:08 -05:00 |
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Rogan Grant
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3dd4f16d09
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Added indicator for testing
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2021-07-28 14:01:12 -05:00 |
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Rogan Grant
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09ed4d54b9
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Just make command a single line for simplicity
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2021-07-28 13:52:26 -05:00 |
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Rogan Grant
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09e0ea2674
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typo
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2021-07-28 13:46:40 -05:00 |
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Rogan Grant
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e1e0810d1b
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Clean up module loading script
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2021-07-28 13:44:48 -05:00 |
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Rogan Grant
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e2c566ed13
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Testing "automounts"
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2021-07-28 13:38:06 -05:00 |
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Rogan Grant
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f104250ff4
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Removed comment
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2021-07-28 13:34:49 -05:00 |
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Rogan Grant
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9df267a192
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Merged duplicate params
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2021-07-28 13:27:17 -05:00 |
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Rogan Grant
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ff6823ec1d
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removed unnecessary space
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2021-07-28 13:22:52 -05:00 |
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Rogan Grant
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9957e9eea1
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Version 1 of custom config with queue-switching for long jobs and module loading
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2021-07-28 13:11:02 -05:00 |
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Rogan Grant
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30ca555060
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Added nu_genomics to list
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2021-07-28 13:10:35 -05:00 |
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Rogan Grant
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e28a836702
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Added nu_genomics to list
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2021-07-28 13:10:18 -05:00 |
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Rogan Grant
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40170632aa
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First draft of markdown file, with instructions for installing nextflow and getting access
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2021-07-28 13:04:32 -05:00 |
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Rogan Grant
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2af0f4a774
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Added link to NU Genomics markdown
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2021-07-28 13:03:59 -05:00 |
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BarryDigby
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732c3cfe7d
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Merge pull request #262 from BarryDigby/master
NUIG config
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2021-07-28 13:00:50 +01:00 |
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Barry digby
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2c6b9176e2
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Merge branch 'master' of github.com:BarryDigby/configs
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2021-07-28 12:19:45 +01:00 |
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Barry digby
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ef6b13e377
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tabs rm
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2021-07-28 12:19:11 +01:00 |
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BarryDigby
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871b82f6f4
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Merge branch 'master' into master
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2021-07-28 12:16:16 +01:00 |
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Barry digby
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f62298d211
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w
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2021-07-28 11:44:06 +01:00 |
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Barry digby
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2fc8082aad
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w
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2021-07-28 11:43:39 +01:00 |
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