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254 commits

Author SHA1 Message Date
Sven Fillinger
855da0cee3 Refactors weblog url 2019-10-08 14:19:42 +02:00
Alexander Peltzer
ed8c9d9e7a
Update cfc.config 2019-10-08 13:20:58 +02:00
Alexander Peltzer
1e54d9510d
Update cfc.config 2019-10-08 13:15:49 +02:00
Alexander Peltzer
865909ac54
Update cfc.config 2019-10-08 13:14:21 +02:00
Alexander Peltzer
5fae33669d
Update cfc.config
Try this out 👍
2019-10-08 13:07:28 +02:00
Alexander Peltzer
659fe3cadc
Merge pull request #68 from nf-core/CFC-Singularity-Cache
Add Singularity Cache Directory
2019-10-08 12:51:08 +02:00
Alexander Peltzer
4555dd7d36
Update conf/cfc.config 2019-10-08 12:51:01 +02:00
Alexander Peltzer
abb6780081
Add Singularity Cache Directory 2019-10-08 12:48:24 +02:00
Alexander Peltzer
dba5a72817
Merge pull request #67 from phue/cbe_profile
add cbe config
2019-09-23 14:51:17 +02:00
phue
fb60856e40 point travis to local clone
Previously travis tests could only succeed if the config was already present in the master branch, but for newly added
configs it would always fail.

This commit sets custom_config_base to the local clone of the PR branch on the Travis VM where the file is present.
2019-09-23 13:57:58 +02:00
phue
d7e891a576 Revert "point travis to local clone"
This reverts commit 014111b925.
2019-09-23 13:55:43 +02:00
phue
014111b925 point travis to local clone
Previously travis tests could only succeed if the config was already present in the master branch, but for newly added
configs it would always fail.

This commit sets custom_config_base to the local clone of the PR branch on the Travis VM where the file is present.
2019-09-23 13:42:11 +02:00
phue
5e257e7e9a add cbe profile 2019-09-22 16:45:09 +02:00
Alexander Peltzer
836da97efd
Merge pull request #66 from marchoeppner/ccga-config
Updating CCGA configs - adding cache dir and mount points
2019-09-03 17:25:34 +02:00
marchoeppner
3b638e9ccd Fixing typo in ccga_dx config 2019-09-03 15:37:15 +02:00
Szilveszter Juhos
c3c0d088dd
typo 2019-08-16 11:13:32 +02:00
Szilveszter Juhos
e5d8f20204
Merge pull request #65 from MaxUlysse/master
fix: update and rearrange munin configuration file and docs
2019-08-16 11:06:32 +02:00
marchoeppner
486cdfce5f Updating CCGA configs - adding cache dir and mount points 2019-08-07 13:19:16 +02:00
MaxUlysse
4183090379 fix: reduce cpu and mem usage 2019-08-07 12:26:51 +02:00
MaxUlysse
23dd3dd098 Merge branch 'master' of github.com:MaxUlysse/nf-core_configs 2019-08-07 11:56:52 +02:00
MaxUlysse
f69524d59a feat: update docs 2019-08-07 11:56:10 +02:00
MaxUlysse
0bd19517b3 fix: typos 2019-08-07 11:55:56 +02:00
Maxime Garcia
d6a763214c
Update conf/munin.config
Co-Authored-By: Harshil Patel <drpatelh@users.noreply.github.com>
2019-08-07 11:47:47 +02:00
Maxime Garcia
12fb2a60c5
Update conf/munin.config
Co-Authored-By: Harshil Patel <drpatelh@users.noreply.github.com>
2019-08-07 11:47:41 +02:00
MaxUlysse
332ba0dadb fix: update and rearrange munin configuration file and docs 2019-08-07 11:10:48 +02:00
Martin Proks
da2a9047b0
fix: added kraken to the list (#64) 2019-08-05 14:59:36 +02:00
Martin Proks
c583aa0233 Added kraken config (#15)
* Added kraken template
* docs: updated some info
* fix: updated igenomes_base path
2019-08-05 11:19:05 +02:00
Harshil Patel
5abe8bca35
Merge pull request #60 from drpatelh/master
Attempt to get travis tests working
2019-08-01 13:46:44 +01:00
drpatelh
91a5e64e1c Ignore czbiohub_aws 2019-08-01 09:42:50 +01:00
drpatelh
e0c684ee8f Aarrrgh pulling configs from master 2019-07-31 23:39:42 +01:00
drpatelh
a692ded933 Remove workDir in czbiohub 2019-07-31 23:30:51 +01:00
drpatelh
7ee70fb742 Add in uppmax-devel 2019-07-31 22:52:20 +01:00
drpatelh
0326b56038 Add czbiohub back in 2019-07-31 22:48:22 +01:00
drpatelh
eb0e89eeaa Remove SCRATCH variable 2019-07-31 22:44:54 +01:00
drpatelh
f3e61fdd66 Add prince back in 2019-07-31 22:40:43 +01:00
drpatelh
0f6802a7c8 Add hebbe back in 2019-07-31 22:37:11 +01:00
drpatelh
a496bfaeef Remove uppmax_devel 2019-07-31 22:33:49 +01:00
drpatelh
70919d0dd3 Remove more configs 2019-07-31 22:28:03 +01:00
drpatelh
8be2897961 Remove problematic configs 2019-07-31 22:27:37 +01:00
drpatelh
daf1b9dcd2 Fix type in uppmax-devel 2019-07-31 22:09:30 +01:00
drpatelh
840a97ed68 Clean up and alphabetasize 2019-07-31 21:52:16 +01:00
drpatelh
6298f78bf4 .travis.yml 2019-07-31 21:33:47 +01:00
Alexander Peltzer
e29f46eaeb
Merge pull request #58 from rplanel/master
Add Institut Pasteur config
2019-07-30 16:50:11 +02:00
Remi Planel
1c0d596582 Merge remote-tracking branch 'upstream/master' 2019-07-30 16:15:20 +02:00
Remi Planel
be28a34839 Updat Pasteur doc 2019-07-30 16:12:30 +02:00
Remi Planel
f9a2baf614 Add link to Pasteur doc 2019-07-30 16:10:33 +02:00
Remi Planel
64e78a3dc1 Update the doc 2019-07-30 15:17:25 +02:00
Remi Planel
6f264ac2ca Add pasteur profile doc 2019-07-30 15:15:30 +02:00
Remi Planel
b4cffe0455 Remove buggy cluster option 2019-07-30 15:15:07 +02:00
Remi Planel
96ea16ddbd Ignore vscode workspace 2019-07-30 15:14:18 +02:00