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Author SHA1 Message Date
Sven F
dcc2680ad5
Uses checked out config version 2019-03-06 18:32:14 +01:00
Sven F
5395156d22
Merge pull request #23 from sven1103/master 
Adds profile integration tests
 2019-03-06 18:24:48 +01:00
Sven Fillinger
fe9d85b23c Fixes unresolved var 2019-03-06 18:20:56 +01:00
Sven Fillinger
7ec2532b78 Points config version to current branch 2019-03-06 17:58:43 +01:00
Sven Fillinger
638f986f34 Adds profile integration tests 2019-03-06 17:42:14 +01:00
Harshil Patel
6370484894
Merge pull request #22 from ewels/master 
Hotfix for breaking pipelines that don't already support params.custom_config_base
 2019-03-06 16:09:02 +00:00
Phil Ewels
6daf76f47d Hotfix for breaking pipelines that don't already support params.custom_config_base 2019-03-06 17:03:13 +01:00
Alexander Peltzer
a2f5522396
Merge pull request #19 from apeltzer/make_elvis_great_again 
Provide fix for online issues
 2019-03-06 13:16:31 +01:00
Sven F
ad47005fb6
Update nfcore_custom.config 
Co-Authored-By: apeltzer <apeltzer@users.noreply.github.com>
 2019-03-06 13:13:52 +01:00
Alexander Peltzer
20deaf3b46 Provide fix for online issues 2019-03-06 12:59:54 +01:00
Alexander Peltzer
8ebcfa26a9
Update nfcore_custom.config 
Fix mini typo
 2019-03-06 08:21:34 +01:00
Phil Ewels
c39b4589dd
Merge pull request #17 from ewels/master 
Added support for new params.custom_config_base option
 2019-03-05 16:56:13 +01:00
Phil Ewels
d115909343 Tyop 2019-03-05 16:53:59 +01:00
Phil Ewels
e0ba8e6f07 Tweak the readme 2019-03-05 16:28:10 +01:00
Phil Ewels
9fb5715c4c Added support for new params.custom_config_base option 2019-03-05 16:12:39 +01:00
Alexander Peltzer
6541f77dc4
Merge pull request #16 from phue/mendel-update 
update config for MENDEL cluster
 2019-02-28 08:39:40 +01:00
phue
6fc65b54a2 add mendel.md 2019-02-27 22:26:31 +00:00
phue
59887d9bc8 update config for MENDEL cluster 2019-02-27 16:03:26 +00:00
Alexander Peltzer
164ae59568
Update cfc.config 
Please use the newest singularity version 3.0.3!
 2019-02-21 10:49:29 +01:00
Alexander Peltzer
d6ea834f40
Update cfc.config 2019-02-21 09:17:28 +01:00
Alexander Peltzer
637ffb782c
Fix CFC config 2019-02-19 17:03:53 +01:00
James A. Fellows Yates
6d9faa1777
Merge pull request #14 from jfy133/master 
Made small SLURM queue change for SHH
 2019-01-21 20:33:12 +01:00
James A. Fellows Yates
7a51c684f5
Made small SLURM queue change for SHH 2019-01-21 20:31:37 +01:00
James A. Fellows Yates
13cda2f1d2
Merge pull request #2 from nf-core/master 
Syncing with latest versions
 2019-01-21 20:30:45 +01:00
Alexander Peltzer
9962e5b3f2
Merge pull request #13 from drpatelh/master 
Changed description for Singularity image download
 2019-01-11 16:04:52 +01:00
drpatelh
24fb466bc0 Changed description for Singularity image download 2019-01-11 14:52:15 +00:00
Harshil Patel
de1c04ec2a
Merge pull request #12 from matq007/munin-config 
Added configuration for Munin
 2019-01-11 14:41:10 +00:00
Harshil Patel
789d211b18
Update munin.md 2019-01-11 14:32:35 +00:00
Martin Proks
7acd9cf7df
Updating suggested changes 2019-01-11 15:28:10 +01:00
Martin Proks
89dbb6c061
Setting Singularity as default method 2019-01-11 14:37:12 +01:00
Martin Proks
548c8bca3f
Updated munin doc and configuration 2019-01-10 15:46:16 +01:00
Martin Proks
f259178642
Added munin config boilerplate 2019-01-09 17:27:55 +01:00
James A. Fellows Yates
b9bc420071
Merge pull request #11 from jfy133/SHH_docs 
Added SHH docs and typo fixes
 2019-01-07 20:36:53 +01:00
James A. Fellows Yates
f62613588f
Removed newline typo 2019-01-07 20:35:40 +01:00
James A. Fellows Yates
2344b16693
Merge pull request #1 from jfy133/SHH_documentation 
Create shh documentation
 2019-01-07 20:28:47 +01:00
James A. Fellows Yates
7f3acac4f4
Create shh documentation 2019-01-07 20:28:31 +01:00
James A. Fellows Yates
0325e556f2
Fixed the mysterious 'insert here' Institution 2019-01-07 20:25:39 +01:00
Alexander Peltzer
463c4adfa3
Merge pull request #10 from ewels/master 
Documentation tweaks
 2019-01-07 14:28:22 +01:00
Phil Ewels
66a08891c7 Documentation tweaks 2019-01-07 14:25:06 +01:00
Phil Ewels
723428c186
Merge pull request #9 from apeltzer/master 
Add SHH Configuration / add custom config_profile_* descriptions
 2019-01-07 12:59:22 +01:00
Harshil Patel
59bc3b43be
Update crick.config 2019-01-07 11:35:49 +00:00
Harshil Patel
f81c67627e
Update crick.config 2019-01-07 11:18:01 +00:00
Alexander Peltzer
d4ea56aaae Update UCT_Hex profile 2019-01-07 12:14:04 +01:00
Phil Ewels
325dfe3968
Update docs/binac.md 
Co-Authored-By: apeltzer <apeltzer@users.noreply.github.com>
 2019-01-07 12:11:31 +01:00
Phil Ewels
1758fbc11c
Update docs/cfc.md 
Co-Authored-By: apeltzer <apeltzer@users.noreply.github.com>
 2019-01-07 12:11:19 +01:00
Phil Ewels
6d14461adc
Update docs/template.md 
Co-Authored-By: apeltzer <apeltzer@users.noreply.github.com>
 2019-01-07 12:11:02 +01:00
Phil Ewels
94e546fd4b
Update docs/uzh.md 
Co-Authored-By: apeltzer <apeltzer@users.noreply.github.com>
 2019-01-07 12:10:41 +01:00
Alexander Peltzer
02e97811c6 Get rid of template / iGenomes stuff 2019-01-07 11:21:17 +01:00
Alexander Peltzer
6a12e763ea Get rid of examples 2019-01-07 11:16:58 +01:00
Alexander Peltzer
ce4b0373fa Add in UZH 2019-01-06 15:35:26 +01:00