James A. Fellows Yates
3da1373c14
Updated path to centralised singularity cache
2019-03-14 21:16:02 +01:00
Harshil Patel
8bc975c8c3
Merge pull request #33 from ewels/master
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Removed params.config_profile_name, added params.hostnames
2019-03-13 16:49:43 +00:00
Phil Ewels
1191863e1c
Removed params.config_profile_name, added params.hostnames
2019-03-13 17:19:34 +01:00
phue
13df59bfaf
remove singularity support
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reasons:
* the kernel running on the compute nodes does not support overlayfs und thus containers downloaded from
public registries won't run because they lack the /lustre mountpoint
* building containers manually using the Singularity file would work, however nf-core pipelines will stop
providing these files in future releases
2019-03-12 17:57:31 +00:00
Alexander Peltzer
fbf9397182
Bump
2019-03-12 18:48:29 +01:00
Alexander Peltzer
3ee7195fa8
Central resource for both binac and cfc now
2019-03-12 14:58:41 +01:00
Alexander Peltzer
68b759d6ef
Mini Update
2019-03-11 18:12:35 +01:00
Alexander Peltzer
f4f3c4e53b
Roll out binac too
2019-03-11 14:29:42 +01:00
Alexander Peltzer
6b21538062
Rolling out iGenomes now
2019-03-07 16:12:30 +01:00
phue
59887d9bc8
update config for MENDEL cluster
2019-02-27 16:03:26 +00:00
Alexander Peltzer
164ae59568
Update cfc.config
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Please use the newest singularity version 3.0.3!
2019-02-21 10:49:29 +01:00
Alexander Peltzer
d6ea834f40
Update cfc.config
2019-02-21 09:17:28 +01:00
Alexander Peltzer
637ffb782c
Fix CFC config
2019-02-19 17:03:53 +01:00
James A. Fellows Yates
7a51c684f5
Made small SLURM queue change for SHH
2019-01-21 20:31:37 +01:00
Martin Proks
7acd9cf7df
Updating suggested changes
2019-01-11 15:28:10 +01:00
Martin Proks
89dbb6c061
Setting Singularity as default method
2019-01-11 14:37:12 +01:00
Martin Proks
548c8bca3f
Updated munin doc and configuration
2019-01-10 15:46:16 +01:00
Martin Proks
f259178642
Added munin config boilerplate
2019-01-09 17:27:55 +01:00
Phil Ewels
66a08891c7
Documentation tweaks
2019-01-07 14:25:06 +01:00
Harshil Patel
59bc3b43be
Update crick.config
2019-01-07 11:35:49 +00:00
Harshil Patel
f81c67627e
Update crick.config
2019-01-07 11:18:01 +00:00
Alexander Peltzer
d4ea56aaae
Update UCT_Hex profile
2019-01-07 12:14:04 +01:00
Alexander Peltzer
2b814041ee
Add in both uppmax profiles
2019-01-04 16:33:54 +01:00
Alexander Peltzer
6f7a3cc422
Add Hebbe
2019-01-04 16:30:40 +01:00
Alexander Peltzer
e07d8bd687
Get rid of header in CRICK config
2019-01-04 16:29:49 +01:00
Alexander Peltzer
aca790bb4b
Add CCGA Profile
2019-01-04 16:28:41 +01:00
Alexander Peltzer
7af6b48b4d
Adjust general usage to separate params section
2019-01-04 14:55:22 +01:00
Alexander Peltzer
9c97680d4c
Add UZH
2019-01-04 14:49:52 +01:00
Alexander Peltzer
bc8e05f4b3
Add Phoenix
2019-01-04 14:48:14 +01:00
Alexander Peltzer
6ae7d02b14
Add Mendel
2019-01-04 14:46:30 +01:00
Alexander Peltzer
078272745a
Update BINAC, CFC, SHH COnfig profiles
2019-01-04 14:42:09 +01:00
Alexander Peltzer
87cea82c43
Use james github handle
2019-01-04 10:21:16 +01:00
Alexander Peltzer
a78fe147f0
Add more details on config profiles
2019-01-04 10:19:39 +01:00
Alexander Peltzer
1051339461
Remove base config stuff
2019-01-03 16:02:07 +01:00
Alexander Peltzer
98fca8a1ef
Add SHH Configuration
2019-01-03 16:01:06 +01:00
phue
5c609859c5
add config for MENDEL cluster
2018-12-04 16:58:33 +01:00
Harshil Patel
ddc0bbd7b3
Update phoenix.config
2018-11-26 23:31:44 +00:00
Alexander Peltzer
42ed4b9da4
Add Phoenix configs
2018-11-27 00:02:40 +01:00
Harshil Patel
2c513e5266
Update binac.config
2018-11-26 22:47:36 +00:00
Phil Ewels
e38e9327f4
Some tidying
2018-11-26 17:32:06 +01:00
drpatelh
d52db66077
Added existing configs from all pipelines
2018-11-23 15:56:34 +00:00