51 commits

This branch

This branch

All branches

Author	SHA1	Message	Date
Thomas A. Christensen II	579586a5f6	Add building (not running yet) Dockerfile ... Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>	2021-11-16 17:01:39 -06:00
Thomas A. Christensen II	f17d83d391	Replace generic README with specific one ... Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>	2021-11-16 17:01:28 -06:00
Thomas A. Christensen II	61bf9ba24d	Delete all other container definitions ... Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>	2021-11-16 16:52:01 -06:00
Thomas A. Christensen II	2e84ca3543	Move julia_bam-readcounts to its own branch ... Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>	2021-11-15 12:37:48 -06:00
Thomas A. Christensen II	f94009dd24	Add git as a dependency ... Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>	2021-11-15 12:35:14 -06:00
Thomas A. Christensen II	593b7f222c	Add combined Julia and bam-readcounts Dockerfile ... Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>	2021-11-15 12:21:34 -06:00
Thomas A. Christensen II	23b8e08df4	Add other container sources to README	2021-09-09 15:44:31 -05:00
Thomas A. Christensen II	41f6653534	Add dockerfile for Julia image	2021-09-09 15:12:30 -05:00
Thomas A. Christensen II	4b91b7cc91	Add ShoRAH image	2021-09-07 12:27:57 -05:00
Thomas A. Christensen II	9a0114a0c5	Add libcurl to permenent dependencies for HTSlib	2021-09-07 11:44:02 -05:00
Thomas A. Christensen II	0362a4b037	Add HTSlib image	2021-09-07 09:47:43 -05:00
Thomas A. Christensen II	ed4bc3a895	Speed up vscode	2021-09-07 09:46:42 -05:00
Thomas A. Christensen II	96d57bfe78	Add CliqueSNV	2021-08-31 14:12:33 -05:00
Thomas A. Christensen II	99897bdfe5	Editor tab settings change	2021-08-31 13:43:53 -05:00
Thomas A. Christensen II	d0deed39b6	Add minimap2	2021-08-17 11:59:29 -05:00
Thomas A. Christensen II	27208e9755	Add Samtools	2021-08-17 11:21:23 -05:00
MillironX	cd967e5d0a	Remove Sniffles	2021-08-10 18:22:58 -05:00
MillironX	ca9180cb41	Fix Velvet container link	2021-08-10 18:21:12 -05:00
MillironX	d645e426f2	Give Velvet a pretty README	2021-08-10 18:20:14 -05:00
MillironX	46a55a5e9a	Give VarScan a pretty README	2021-08-10 18:16:35 -05:00
MillironX	54f2a931f8	Correct link in Sniffles README	2021-08-10 18:14:28 -05:00
MillironX	a4778b0c1c	Give Ray a pretty README	2021-08-10 18:11:20 -05:00
MillironX	06717ee440	Correct pigz version number	2021-08-10 18:07:42 -05:00
MillironX	d2e71f9a67	Give pigz a pretty README	2021-08-10 18:03:01 -05:00
MillironX	8df4384e22	Give Jula a pretty README	2021-08-10 17:57:02 -05:00
MillironX	143933c0b6	Give assembly_improvement a pretty README	2021-08-10 17:50:08 -05:00
MillironX	96f1410056	Change sniffles base image	2021-08-10 17:35:08 -05:00
MillironX	aa9cef8d49	Merge branch 'master' of https://github.com/MillironX/singularity-builds	2021-08-10 17:34:38 -05:00
MillironX	740fb9d40e	Make pretty README	2021-08-10 17:34:08 -05:00
Thomas A. Christensen II	6750fd8f96	Create LICENSE.md	2021-08-10 16:51:34 -05:00
Thomas A. Christensen II	4ea147eb1a	Delete LICENSE	2021-08-10 16:50:25 -05:00
Thomas A. Christensen II	9510919e05	Create LICENSE	2021-08-10 16:49:38 -05:00
MillironX	adbcd2b6e5	Fix gitattributes	2021-08-10 13:24:05 -05:00
MillironX	89404a5fd8	Fix library exclusion bug in Sniffle image	2021-08-10 13:21:02 -05:00
MillironX	847bc7d604	Overhaul Sniffles README	2021-08-10 13:20:04 -05:00
MillironX	53dfb25645	Declare def files as Singularity	2021-08-10 13:19:04 -05:00
MillironX	d929773394	Add base image badge to Sniffles README	2021-08-10 13:02:10 -05:00
MillironX	d0c5b7ecbf	Add README for Sniffles	2021-08-10 12:17:18 -05:00
MillironX	6c2b127866	Add sniffles	2021-08-10 11:51:12 -05:00
MillironX	28d84a638e	Fix typos in Julia definition	2021-08-09 11:36:50 -05:00
MillironX	6763d3254e	Update Julia to 1.6.2 and switched to Alpine base image	2021-08-09 11:30:40 -05:00
MillironX	a0377be27a	Bump VarScan definition version	2021-08-09 11:09:54 -05:00
MillironX	48683f6b80	Add samtools to VarScan image	2021-08-09 11:09:11 -05:00
MillironX	1181f417e0	Add varscan image	2021-08-09 09:49:06 -05:00
MillironX	15c82130d9	Add Velvet	2021-07-19 10:35:31 -05:00
MillironX	f05c179091	Add Sanger Pathogens' Assembly Improvement	2021-07-19 09:58:37 -05:00
MillironX	0c3b4ccb06	Add pigz image	2021-06-29 08:29:35 -05:00
MillironX	2aa4c8e88e	Add Julia image	2021-06-22 15:03:30 -05:00
MillironX	536450ce8e	Basic Ray Image	2021-06-14 16:16:15 -05:00
MillironX	4619654569	Convice Github that README is actually written in markdown	2021-06-14 15:50:12 -05:00