Commit graph

50 commits

Author SHA1 Message Date
f17d83d391
Replace generic README with specific one
Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
2021-11-16 17:01:28 -06:00
61bf9ba24d
Delete all other container definitions
Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
2021-11-16 16:52:01 -06:00
2e84ca3543
Move julia_bam-readcounts to its own branch
Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
2021-11-15 12:37:48 -06:00
f94009dd24
Add git as a dependency
Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
2021-11-15 12:35:14 -06:00
593b7f222c
Add combined Julia and bam-readcounts Dockerfile
Signed-off-by: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
2021-11-15 12:21:34 -06:00
23b8e08df4
Add other container sources to README 2021-09-09 15:44:31 -05:00
41f6653534
Add dockerfile for Julia image 2021-09-09 15:12:30 -05:00
4b91b7cc91
Add ShoRAH image 2021-09-07 12:27:57 -05:00
9a0114a0c5
Add libcurl to permenent dependencies for HTSlib 2021-09-07 11:44:02 -05:00
0362a4b037
Add HTSlib image 2021-09-07 09:47:43 -05:00
ed4bc3a895
Speed up vscode 2021-09-07 09:46:42 -05:00
96d57bfe78
Add CliqueSNV 2021-08-31 14:12:33 -05:00
99897bdfe5
Editor tab settings change 2021-08-31 13:43:53 -05:00
d0deed39b6
Add minimap2 2021-08-17 11:59:29 -05:00
27208e9755
Add Samtools 2021-08-17 11:21:23 -05:00
cd967e5d0a
Remove Sniffles 2021-08-10 18:22:58 -05:00
ca9180cb41
Fix Velvet container link 2021-08-10 18:21:12 -05:00
d645e426f2
Give Velvet a pretty README 2021-08-10 18:20:14 -05:00
46a55a5e9a
Give VarScan a pretty README 2021-08-10 18:16:35 -05:00
54f2a931f8
Correct link in Sniffles README 2021-08-10 18:14:28 -05:00
a4778b0c1c
Give Ray a pretty README 2021-08-10 18:11:20 -05:00
06717ee440
Correct pigz version number 2021-08-10 18:07:42 -05:00
d2e71f9a67
Give pigz a pretty README 2021-08-10 18:03:01 -05:00
8df4384e22
Give Jula a pretty README 2021-08-10 17:57:02 -05:00
143933c0b6
Give assembly_improvement a pretty README 2021-08-10 17:50:08 -05:00
96f1410056
Change sniffles base image 2021-08-10 17:35:08 -05:00
aa9cef8d49
Merge branch 'master' of https://github.com/MillironX/singularity-builds 2021-08-10 17:34:38 -05:00
740fb9d40e
Make pretty README 2021-08-10 17:34:08 -05:00
6750fd8f96
Create LICENSE.md 2021-08-10 16:51:34 -05:00
4ea147eb1a
Delete LICENSE 2021-08-10 16:50:25 -05:00
9510919e05
Create LICENSE 2021-08-10 16:49:38 -05:00
adbcd2b6e5
Fix gitattributes 2021-08-10 13:24:05 -05:00
89404a5fd8
Fix library exclusion bug in Sniffle image 2021-08-10 13:21:02 -05:00
847bc7d604
Overhaul Sniffles README 2021-08-10 13:20:04 -05:00
53dfb25645
Declare def files as Singularity 2021-08-10 13:19:04 -05:00
d929773394
Add base image badge to Sniffles README 2021-08-10 13:02:10 -05:00
d0c5b7ecbf
Add README for Sniffles 2021-08-10 12:17:18 -05:00
6c2b127866
Add sniffles 2021-08-10 11:51:12 -05:00
28d84a638e
Fix typos in Julia definition 2021-08-09 11:36:50 -05:00
6763d3254e
Update Julia to 1.6.2 and switched to Alpine base image 2021-08-09 11:30:40 -05:00
a0377be27a
Bump VarScan definition version 2021-08-09 11:09:54 -05:00
48683f6b80
Add samtools to VarScan image 2021-08-09 11:09:11 -05:00
1181f417e0
Add varscan image 2021-08-09 09:49:06 -05:00
15c82130d9
Add Velvet 2021-07-19 10:35:31 -05:00
f05c179091
Add Sanger Pathogens' Assembly Improvement 2021-07-19 09:58:37 -05:00
0c3b4ccb06
Add pigz image 2021-06-29 08:29:35 -05:00
2aa4c8e88e
Add Julia image 2021-06-22 15:03:30 -05:00
536450ce8e
Basic Ray Image 2021-06-14 16:16:15 -05:00
4619654569
Convice Github that README is actually written in markdown 2021-06-14 15:50:12 -05:00
faa6049465
Initial commit 2021-06-14 15:48:37 -05:00