Alexander Peltzer
ead80fb9d0
Drop config
2019-07-30 18:54:38 +02:00
Alexander Peltzer
d9930b053c
Drop aquila
2019-07-30 18:53:45 +02:00
Alexander Peltzer
82ffedf895
Drop aquila
2019-07-30 18:53:36 +02:00
Alexander Peltzer
4e48d4cc62
Fix remaining points by drpatelh
2019-07-30 18:53:00 +02:00
Alexander Peltzer
29a141adca
Sort it
2019-07-30 16:54:58 +02:00
Alexander Peltzer
35c715ca3b
Merge remote-tracking branch 'upstream/master'
2019-07-30 16:53:19 +02:00
Alexander Peltzer
e29f46eaeb
Merge pull request #58 from rplanel/master
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Add Institut Pasteur config
2019-07-30 16:50:11 +02:00
Remi Planel
1c0d596582
Merge remote-tracking branch 'upstream/master'
2019-07-30 16:15:20 +02:00
Remi Planel
be28a34839
Updat Pasteur doc
2019-07-30 16:12:30 +02:00
Remi Planel
f9a2baf614
Add link to Pasteur doc
2019-07-30 16:10:33 +02:00
Remi Planel
64e78a3dc1
Update the doc
2019-07-30 15:17:25 +02:00
Remi Planel
6f264ac2ca
Add pasteur profile doc
2019-07-30 15:15:30 +02:00
Remi Planel
b4cffe0455
Remove buggy cluster option
2019-07-30 15:15:07 +02:00
Remi Planel
96ea16ddbd
Ignore vscode workspace
2019-07-30 15:14:18 +02:00
Harshil Patel
c522408888
Merge pull request #57 from marchoeppner/dev
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Adding CCGA DX cluster config
2019-07-29 13:13:13 +02:00
marchoeppner
b74f020f14
Update docs/ccga_dx.md
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Co-Authored-By: Harshil Patel <drpatelh@users.noreply.github.com>
2019-07-29 12:45:30 +02:00
marchoeppner
7d5de651aa
Update README.md
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Co-Authored-By: Harshil Patel <drpatelh@users.noreply.github.com>
2019-07-29 12:45:08 +02:00
marchoeppner
b31db18dfb
Adding config file for CCGA dx cluster
2019-07-29 12:08:07 +02:00
marchoeppner
71bc98afae
Adding config file for CCGA dx cluster
2019-07-29 12:06:29 +02:00
Remi Planel
fbb33fde63
Details
2019-07-24 11:43:08 +02:00
Remi Planel
1cb132a457
Define a profile for the Pasteur config
2019-07-24 11:32:25 +02:00
Remi Planel
1b30c5a4d2
Add the Pasteur profile
2019-07-24 11:32:02 +02:00
Alexander Peltzer
9106559b2f
Update cfc.config
2019-07-15 17:53:11 +02:00
Olga Botvinnik
c59ca56525
Merge pull request #51 from czbiohub/olgabot/czb-update
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[WIP] CZ Biohub update
2019-07-09 16:02:33 -07:00
Olga Botvinnik
474e98daaf
Merge branch 'master' into olgabot/czb-update
2019-07-09 16:02:25 -07:00
Alexander Peltzer
85f9b2e661
Merge pull request #55 from marchoeppner/ccga-config
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Updating CCGA config file
2019-07-05 08:52:01 +02:00
marchoeppner
fe0153befd
Updating CCGA documentation
2019-07-05 08:30:02 +02:00
marchoeppner
d66bf4e478
Updating CCGA documentation
2019-07-05 08:28:18 +02:00
marchoeppner
cb507177d5
Updating CCGA config file
2019-07-05 08:03:37 +02:00
Olga Botvinnik
069963ff8a
Make czbiohub_aws_highpriority only set the AWS Batch queue and nothing else
2019-07-03 16:01:47 -07:00
Olga Botvinnik
917ec0863d
add default trimming
2019-07-03 16:01:03 -07:00
Alexander Peltzer
45d36a1506
Update cfc.config
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Add Weblog for CFC cluster
2019-07-03 09:21:16 +02:00
Olga Botvinnik
6a2d2003f0
Add high priority AWS batch queue to CZBiohub AWS
2019-07-01 09:25:46 -07:00
Olga Botvinnik
70b5205d15
Add human salmon index and mouse star index
2019-06-27 15:02:47 -07:00
Olga Botvinnik
d1983f8acd
Use new and improved GENCODE+ERCC annotation
2019-06-26 17:56:26 -07:00
Olga Botvinnik
cfcb533b95
Add czbiohub_aws to list of configs"
2019-06-25 19:02:49 -07:00
Olga Botvinnik
b82d68c009
Add docs
2019-06-24 17:55:01 -07:00
Olga Botvinnik
b0c67e0a9b
Add both seqCenter and seq_center
2019-06-24 17:52:10 -07:00
Olga Botvinnik
acad9ac7e5
Try to clean up czb update
2019-06-24 17:50:36 -07:00
Szilveszter Juhos
b426332dc1
Merge pull request #50 from szilvajuhos/master
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Using correct reference location for munin
2019-06-24 09:57:43 +02:00
Szilveszter Juhos
f40ed194e3
Using correct reference location for munin
2019-06-24 09:54:37 +02:00
James A. Fellows Yates
505af9a909
Merge pull request #49 from maxibor/master
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Fix queuesize Ccope and Singularity
2019-06-18 20:36:36 +02:00
maxibor
c7eed3fa4c
fix queuesize scope and singularity
2019-06-14 19:16:20 +02:00
Alexander Peltzer
ebe838ac7e
Merge pull request #45 from czbiohub/olgabot/czbiohub
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[WIP] Add CZ Biohub
2019-06-06 13:35:34 +02:00
Olga Botvinnik
ad7e26ea69
Write out docs for czbiohub"
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git push
2019-06-05 14:42:24 -07:00
Olga Botvinnik
268e411d10
Add czbiohub_aws to list
2019-06-05 14:42:15 -07:00
Olga Botvinnik
3a481402b8
Get czbiohub config to work
2019-06-05 14:42:07 -07:00
Alexander Peltzer
de04c5f72b
Merge pull request #47 from tobsecret/master
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updated singularity version in conf/prince.config to reflect version …
2019-06-05 15:13:09 +02:00
Tobias Schraink
4491907f14
updated singularity version in conf/prince.config to reflect version installed on prince
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The prince admins changed the singularity version to 3.2.1 from 3.1.0, making the old version unavailable. To keep this config functional, I updated the version number for singularity.
2019-06-04 12:56:11 -04:00
Alexander Peltzer
515e9484de
Merge pull request #44 from drpatelh/dev
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Add proper nf-core logo
2019-06-01 12:36:57 +02:00