13 commits

Author	SHA1	Message	Date
Olga Botvinnik	8166e0f606	executor.cli --> aws.batch.cliPath	2021-05-19 13:36:15 -07:00
Phil Ewels	17824d2d62	Merge czbiohub_aws_highpriority profile into czbiohub_aws	2020-06-16 15:20:39 +02:00
Olga Botvinnik	52369ba6ad	Add AaegL5.0 config	2020-03-17 16:45:20 -07:00
Olga Botvinnik	f57e00e87d	Set awsqueue parameter properly	2019-11-27 15:57:09 -08:00
phue	18ed48f398	deprecate igenomesIgnore in favor of igenomes_ignore ... keep both for now until all the pipelines have been synced	2019-10-28 11:38:24 +01:00
Olga Botvinnik	474e98daaf	Merge branch 'master' into olgabot/czb-update	2019-07-09 16:02:25 -07:00
Olga Botvinnik	917ec0863d	add default trimming	2019-07-03 16:01:03 -07:00
Olga Botvinnik	6a2d2003f0	Add high priority AWS batch queue to CZBiohub AWS	2019-07-01 09:25:46 -07:00
Olga Botvinnik	70b5205d15	Add human salmon index and mouse star index	2019-06-27 15:02:47 -07:00
Olga Botvinnik	d1983f8acd	Use new and improved GENCODE+ERCC annotation	2019-06-26 17:56:26 -07:00
Olga Botvinnik	b0c67e0a9b	Add both seqCenter and seq_center	2019-06-24 17:52:10 -07:00
Olga Botvinnik	acad9ac7e5	Try to clean up czb update	2019-06-24 17:50:36 -07:00
Olga Botvinnik	3a481402b8	Get czbiohub config to work	2019-06-05 14:42:07 -07:00

Renamed from conf/czbiohub.config (Browse further)