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Author	SHA1	Message	Date
Phil Ewels	a9aae577ef	Merge pull request #215 from Emiller88/ganymede-update	2021-03-22 19:18:02 +01:00
Edmund Miller	a6975cdd4e	fix(ganymede): large => high ... Co-authored-by: drpatelh <drpatelh@users.noreply.github.com>	2021-03-22 12:42:56 -05:00
Edmund Miller	34ccce9531	fix(ganymede): Add process resources ... Trimgalore though it can be a bottom neck, doesn't require the 1 big memory node we have and can be run on the genomics queue.	2021-03-21 21:47:59 -05:00
Edmund Miller	4570718b12	fix(ganymede): Add TMPDIR and SINGULARITY_CACHEDIR env variables	2021-03-21 21:45:39 -05:00
Harshil Patel	2ce1e2a9cc	Create rnaseq.config	2021-03-17 12:32:47 +00:00
Maxime Garcia	ec11a9a951	Merge pull request #212 from noirot/master ... Add IFB config	2021-03-16 16:55:38 +01:00
Noirot Céline	e3216ccf79	typo	2021-03-16 16:00:56 +01:00
Noirot Céline	cc17045914	Add institution	2021-03-16 15:58:29 +01:00
Noirot Céline	7e9f83ee81	Add IFB config	2021-03-16 15:54:19 +01:00
Patrick Hüther	a64dfd98c2	Merge pull request #209 from phue/cbe_rapid_qos ... cbe: add rapid qos	2021-03-10 21:03:08 +01:00
phue	da3bd2693d	cbe: add rapid qos ... and update config url	2021-03-10 11:26:01 +01:00
Alexander Peltzer	bb8e82e9c7	Merge pull request #208 from maxibor/master ... Update shh config after CDAG departure	2021-02-17 10:41:13 +01:00
maxibor	286e18b80c	update shh config after CDAG departure	2021-02-17 10:22:05 +01:00
Harshil Patel	d457699de1	Merge pull request #207 from drpatelh/primers ... Update links to be consistent for viralrecon genomes raw URLs	2021-02-16 13:25:20 +00:00
drpatelh	01a4f8559e	Update links to be consistent	2021-02-16 13:17:16 +00:00
Harshil Patel	6ffaf922c5	Update genomes.config	2021-02-16 10:28:32 +00:00
Alexander Peltzer	a4630a926d	Merge pull request #206 from marchoeppner/ccga_dx_update ... Updating the CCGA DX profile to new storage system	2021-02-16 09:46:54 +01:00
Marc Hoeppner	1f2fce00aa	Updating the CCGA DX profile to new storage system	2021-02-16 09:02:16 +01:00
Harshil Patel	4de0855218	Update genomes.config	2021-02-15 18:48:03 +00:00
Harshil Patel	76750ad59b	Merge pull request #205 from drpatelh/primers ... Add ARTIC primer sets to genome config	2021-02-15 17:16:13 +00:00
drpatelh	9d500cf679	Reorder params	2021-02-15 17:02:26 +00:00
drpatelh	f283dfb2dc	Add ARTIC primer sets to genome config	2021-02-15 16:58:30 +00:00
James A. Fellows Yates	86566ddd3b	Merge pull request #204 from jfy133/master ... Add a 'big_data' profile for eager @ SHH	2021-02-04 15:07:52 +01:00
James A. Fellows Yates	e32f1e46ff	Update shh.config	2021-02-04 08:13:16 +01:00
James A. Fellows Yates	c515a401c7	Update shh.config	2021-02-04 08:06:35 +01:00
James A. Fellows Yates	82fe8a04be	Update shh.config	2021-02-04 08:02:33 +01:00
James A. Fellows Yates	e7ac0bae13	Update shh.config	2021-02-04 08:00:57 +01:00
James A. Fellows Yates	eb725f9ea3	Update shh.config	2021-02-03 20:13:09 +01:00
Alexander Peltzer	95791b04a4	Merge pull request #203 from oist/draftOISTconfig ... Institutional profile for the Okinawa Institute of Science and Technology (OIST)	2021-02-02 14:07:03 +01:00
Charles Plessy	1608b36dcf	Institutional profile for Okinawa Institute of Science and Technology	2021-02-02 17:40:10 +09:00
Thiseas C. Lamnidis	c33cedf4ed	Merge pull request #202 from nf-core/TCLamnidis-patch-1 ... Add debug profile	2021-01-26 15:20:56 +01:00
Thiseas C. Lamnidis	713a032a36	Add debug profile ... which deactivates cleanup of workdir after successful run	2021-01-26 15:08:21 +01:00
James A. Fellows Yates	5ba1b01c0c	Merge pull request #200 from nf-core/ceh-config ... Seg_globe config	2021-01-21 13:24:26 +01:00
James A. Fellows Yates	26d164ca74	Remove ceh profile for now	2021-01-21 13:15:08 +01:00
James A. Fellows Yates	c4604450d8	Update seg_globe.md	2021-01-21 13:04:12 +01:00
James A. Fellows Yates	7cffcf809b	Update main.yml	2021-01-21 12:50:14 +01:00
Åshild J. Vågene	765a2e0b7e	Update README.md	2021-01-21 11:55:00 +01:00
Åshild J. Vågene	8037b73ddd	Update nfcore_custom.config	2021-01-21 11:52:58 +01:00
Åshild J. Vågene	bcd137225e	Update and rename ceh.md to seg_globe.md	2021-01-21 11:46:46 +01:00
Åshild J. Vågene	594985f1ee	Update and rename ceh.config to seg_globe.config	2021-01-21 11:43:34 +01:00
Åshild J. Vågene	ef80452577	Update docs/ceh.md ... Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2021-01-21 11:16:46 +01:00
Åshild J. Vågene	8fa720b9cc	Update conf/ceh.config ... Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2021-01-21 11:15:06 +01:00
James A. Fellows Yates	2fd475c339	Fix some linting errors	2021-01-21 06:30:43 +01:00
James A. Fellows Yates	964cae4ac7	Add CEH to CI	2021-01-21 06:22:37 +01:00
Åshild J. Vågene	f8973f153a	Update ceh.config	2021-01-21 00:31:49 +01:00
Åshild J. Vågene	d108666950	Update ceh.md	2021-01-21 00:30:54 +01:00
Åshild J. Vågene	91594dffea	Update ceh.config	2021-01-21 00:29:43 +01:00
Åshild J. Vågene	22e6a60db1	Update README.md	2021-01-21 00:22:13 +01:00
Åshild J. Vågene	a6f316b58b	Update README.md	2021-01-21 00:21:13 +01:00
Åshild J. Vågene	65831b73ef	Create ceh.md	2021-01-21 00:17:08 +01:00