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Author SHA1 Message Date
ikeller
af1e57027d edit config and readme 2021-05-19 09:46:07 +02:00
ikeller
fb3cede5d3 add config file 2021-05-19 08:41:55 +02:00
James A. Fellows Yates
f2413553a3
Merge pull request #240 from jfy133/shh 
eager@SHH Add additional retry allowance for silly big data in markdups
 2021-05-05 10:52:58 +02:00
James A. Fellows Yates
a849fe991c
Add additional retry allowance for silly big data in markdups 2021-05-04 21:43:19 +02:00
Maxime U. Garcia
77bd7f567f
Merge pull request #228 from asafpr/master 
updated jax resources
 2021-05-02 14:47:19 +02:00
Phil Ewels
fb40b27eab
Merge pull request #237 from maxulysse/master_opengraph 2021-04-26 17:23:08 +02:00
MaxUlysse
867e1aff61 feat: remove social preview image to use GitHub OpenGraph 2021-04-26 12:41:56 +02:00
Alexander Peltzer
c12c373969
Merge pull request #235 from aunderwo/cambridge 
Add Cambridge University HPC config
 2021-04-25 10:40:56 +02:00
Alexander Peltzer
d624313abd
Merge pull request #236 from aunderwo/sanger 
Add Sanger to README
 2021-04-25 10:40:41 +02:00
Anthony Underwood
e1b1402f50
Add Cambridge to README 2021-04-24 13:22:54 +01:00
Anthony Underwood
5aadc5ec0e
Add Sanger to README 2021-04-24 13:21:19 +01:00
FriederikeHanssen
9cf19d5246
Merge pull request #210 from FriederikeHanssen/cfc_sarek 
Cfc sarek
 2021-04-23 17:22:01 +02:00
Gisela Gabernet
4e9e5d2c67
Merge branch 'master' into cfc_sarek 2021-04-23 16:47:04 +02:00
Anthony Underwood
b660cb7c09
Merge pull request #234 from aunderwo/sanger 
Add a Sanger config and documentation
 2021-04-22 16:41:33 +01:00
Anthony Underwood
982d1a8f2a
Fix markdown linting 2021-04-22 16:41:05 +01:00
Anthony Underwood
29dcc160e3
Create cambridge.md 2021-04-22 16:04:29 +01:00
Anthony Underwood
8b3951b244
Create cambridge.config 2021-04-22 16:00:37 +01:00
Anthony Underwood
3e8f9b3d4e
Remove blank lines 2021-04-22 15:57:09 +01:00
Anthony Underwood
f414446a88
Add info on how to load Singularity into your path 2021-04-22 15:38:36 +01:00
Anthony Underwood
b16b011bcc
Add ~/bin as recommended location for nextflow executable 2021-04-22 12:02:11 +01:00
Anthony Underwood
351c5773f0
Add queue limits for 'normal' 2021-04-22 11:59:34 +01:00
Anthony Underwood
fa267c0cf9
Add sanger to tests 2021-04-21 21:01:25 +01:00
Anthony Underwood
6175362049
Add sanger profile 2021-04-21 20:47:48 +01:00
Anthony Underwood
cc18d213dc
Update sanger.md 2021-04-21 20:24:08 +01:00
Anthony Underwood
40eb3e0201
Update sanger.md 2021-04-21 20:20:30 +01:00
Anthony Underwood
7163e8723d
Create sanger.md 2021-04-21 20:17:42 +01:00
Anthony Underwood
7d8770af1a
Create sanger.config 2021-04-21 16:39:55 +01:00
Maxime Garcia
7498e29ec0
Merge pull request #201 from maxulysse/master_uppmax_offline 
Improve offline docs for Bianca
 2021-04-21 13:04:15 +02:00
Maxime Garcia
1548690ca6
Update docs/uppmax.md 
Co-authored-by: Pontus Freyhult <pontus_github@soua.net>
 2021-04-21 12:27:27 +02:00
Patrick Hüther
fff04ce0ba
Merge pull request #233 from phue/biohpc_gen 
biohpc_gen: update software tree path
 2021-04-21 12:14:06 +02:00
MaxUlysse
bab9241243 fix: markdownlint 2021-04-21 11:51:14 +02:00
MaxUlysse
844246cc7d fix: clearer usage of module 2021-04-21 11:28:58 +02:00
MaxUlysse
1a7ec56c33 feat: more details 2021-04-21 11:23:50 +02:00
MaxUlysse
c89877decc feat: use <PIPLEINE> 2021-04-21 11:17:06 +02:00
MaxUlysse
658fa7ccda fix: markdownlint 2021-04-21 11:08:16 +02:00
Maxime Garcia
79e3dd65a7
Apply suggestions from code review 
Co-authored-by: Pontus Freyhult <pontus_github@soua.net>
 2021-04-21 11:06:39 +02:00
phue
b225a0555a biohpc_gen: update software tree path 2021-04-21 10:08:00 +02:00
Maxime Garcia
4eea06f0db
Apply suggestions from code review 
Co-authored-by: Pontus Freyhult <pontus_github@soua.net>
 2021-04-20 16:03:34 +02:00
MaxUlysse
1c1dd952fc fix: bullet list 2021-04-20 15:58:51 +02:00
Maxime Garcia
e4d2ef0984
Apply suggestions from code review 
Co-authored-by: Phil Ewels <phil.ewels@scilifelab.se>
 2021-04-20 15:53:54 +02:00
MaxUlysse
4930795cab feat: more complete docs 2021-04-20 15:38:49 +02:00
MaxUlysse
10abca712b fix: first draft of bianca guide 2021-04-16 17:01:58 +02:00
Alexander Peltzer
a525be112f
Merge pull request #232 from jfy133/update-mpcdf 
Update mpcdf to use singularity
 2021-04-16 09:28:46 +02:00
James A. Fellows Yates
12a4518803
Markdown lint fix 2021-04-15 22:29:15 +02:00
James A. Fellows Yates
b9a00f7926
Update mpcdf.config 2021-04-15 22:27:07 +02:00
James A. Fellows Yates
0fc90586e0
Update mpcdf.md 2021-04-15 22:26:37 +02:00
Harshil Patel
7ac66dcd72
Update crick.config 2021-04-13 17:07:02 +01:00
Combiz Khozoie
c571c05ab9
Merge pull request #219 from slacalle/patch-2 
Imperial College | Remove "/rdsgpfs"
 2021-04-13 15:28:00 +01:00
Asaf Peer
a0c8a9ec8f updated jax resources 2021-04-12 16:00:34 -04:00
Phil Ewels
2f77d16b70
Merge pull request #220 from ewels/master 
UPPMAX: Avoid undefined parameter warnings
 2021-04-08 15:06:00 +02:00