Rogan Grant
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e2c566ed13
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Testing "automounts"
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2021-07-28 13:38:06 -05:00 |
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Rogan Grant
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f104250ff4
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Removed comment
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2021-07-28 13:34:49 -05:00 |
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Rogan Grant
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9df267a192
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Merged duplicate params
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2021-07-28 13:27:17 -05:00 |
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Rogan Grant
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ff6823ec1d
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removed unnecessary space
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2021-07-28 13:22:52 -05:00 |
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Rogan Grant
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9957e9eea1
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Version 1 of custom config with queue-switching for long jobs and module loading
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2021-07-28 13:11:02 -05:00 |
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Rogan Grant
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30ca555060
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Added nu_genomics to list
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2021-07-28 13:10:35 -05:00 |
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Rogan Grant
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e28a836702
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Added nu_genomics to list
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2021-07-28 13:10:18 -05:00 |
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Rogan Grant
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40170632aa
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First draft of markdown file, with instructions for installing nextflow and getting access
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2021-07-28 13:04:32 -05:00 |
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Rogan Grant
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2af0f4a774
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Added link to NU Genomics markdown
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2021-07-28 13:03:59 -05:00 |
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BarryDigby
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732c3cfe7d
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Merge pull request #262 from BarryDigby/master
NUIG config
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2021-07-28 13:00:50 +01:00 |
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Barry digby
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2c6b9176e2
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Merge branch 'master' of github.com:BarryDigby/configs
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2021-07-28 12:19:45 +01:00 |
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Barry digby
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ef6b13e377
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tabs rm
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2021-07-28 12:19:11 +01:00 |
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BarryDigby
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871b82f6f4
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Merge branch 'master' into master
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2021-07-28 12:16:16 +01:00 |
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Barry digby
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f62298d211
|
w
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2021-07-28 11:44:06 +01:00 |
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Barry digby
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2fc8082aad
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w
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2021-07-28 11:43:39 +01:00 |
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Barry digby
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11cb6cc70d
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w
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2021-07-28 11:41:42 +01:00 |
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Barry digby
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380adf083a
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markdowwwwn
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2021-07-28 11:41:16 +01:00 |
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Maxime U. Garcia
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f82da1de71
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Merge pull request #261 from maxulysse/master_cambridge
fix: closes #260 + sort some lines
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2021-07-28 10:10:39 +02:00 |
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Barry digby
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70b2644c9a
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.
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2021-07-27 17:39:37 +01:00 |
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Barry digby
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2a06d956b3
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mdlint so picky : (
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2021-07-27 17:18:42 +01:00 |
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Barry digby
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b7c7115f1e
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lll
Merge branch 'nf-core-master'
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2021-07-27 17:13:58 +01:00 |
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Barry digby
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2b6e80561a
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Merge branch 'master' of https://github.com/nf-core/configs into
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2021-07-27 17:13:17 +01:00 |
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Barry digby
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4f962260d0
|
s
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2021-07-27 17:08:53 +01:00 |
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Barry digby
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04c0da5a2f
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nuig confg (lugh)
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2021-07-27 17:05:27 +01:00 |
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MaxUlysse
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895c4eb610
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fix: closes #260 + sort some lines
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2021-07-27 16:35:19 +02:00 |
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Harshil Patel
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6ede44b221
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Merge pull request #258 from ameynert/master
Update eddie config docs & added viralrecon config
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2021-07-22 15:14:54 +01:00 |
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ameynert
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2112168420
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Set BLASTDB_LMDB_MAP_SIZE
This environment variable needs to be set in order to prevent memory allocation errors in the MAKEBLASTDB process.
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2021-07-22 15:07:19 +01:00 |
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ameynert
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17fad9dd15
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Update pipeline/viralrecon.config
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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2021-07-21 12:27:09 +01:00 |
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ameynert
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d9abb7d59f
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Added eddie config to viralrecon
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2021-07-21 12:23:47 +01:00 |
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ameynert
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5224eb5574
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Updated resources folder & institute name
Local resources folder was re-organized & re-named BioinformaticsResources. Added note about viralrecon & atacseq pipeline-specific config. IGMM name-changed recently; updated to IGC.
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2021-07-21 12:15:17 +01:00 |
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ameynert
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4ceb369af5
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eddie.config for viralrecon pipeline
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2021-07-21 12:10:43 +01:00 |
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ameynert
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0da2c57784
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Merge pull request #4 from nf-core/master
Merge from nf-core/configs
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2021-07-21 12:09:32 +01:00 |
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Maxime U. Garcia
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47217cae5b
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Merge pull request #231 from maxulysse/master_kraken
Remove kraken profile
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2021-07-20 09:29:47 +02:00 |
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Maxime U. Garcia
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30e058abf0
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Merge branch 'master' into master_kraken
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2021-07-20 09:26:56 +02:00 |
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Harshil Patel
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836d3c4015
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Merge pull request #257 from drpatelh/V1200
Add ARTIC v1200 primers to genomes config for viralrecon
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2021-07-12 14:03:29 +01:00 |
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Harshil Patel
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962dca7a46
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Add ARTIC v1200 primers to genomes config for viralrecon
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2021-07-12 12:24:49 +01:00 |
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Gisela Gabernet
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435955ab20
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Merge pull request #256 from ggabernet/master
Add AWS tower config
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2021-07-03 16:54:59 +02:00 |
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ggabernet
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e6f1bfaa1a
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finally add profile
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2021-07-03 15:13:10 +02:00 |
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ggabernet
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68e12f85ec
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fix cchecker
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2021-07-03 15:11:51 +02:00 |
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ggabernet
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2a69b90be6
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fix cchecker
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2021-07-03 15:09:43 +02:00 |
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ggabernet
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6475671c38
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test that it fails
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2021-07-03 14:57:58 +02:00 |
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ggabernet
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926f3ba24f
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update checker script
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2021-07-03 14:52:44 +02:00 |
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ggabernet
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79fffbd77f
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update changes
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2021-07-03 14:39:17 +02:00 |
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ggabernet
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f3274c49b5
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test profile multiline
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2021-07-03 14:36:56 +02:00 |
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Gisela Gabernet
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e2088a008d
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Merge branch 'master' into master
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2021-07-03 12:24:42 +02:00 |
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ggabernet
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f8690d49e8
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add to tests
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2021-07-03 12:21:03 +02:00 |
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ggabernet
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ee2e8392ab
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add aws_tower profile
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2021-07-03 12:17:21 +02:00 |
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Harshil Patel
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69f63a006d
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Merge pull request #254 from drpatelh/articv4
Add ARTIC v4 primers to genomes config for viralrecon
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2021-07-01 12:31:02 +01:00 |
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Gisela Gabernet
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aae0f0bf07
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Merge pull request #255 from ggabernet/master
update cfc configs
|
2021-07-01 10:59:25 +02:00 |
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ggabernet
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d59d099fe8
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remove load module in cfc configs
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2021-07-01 10:52:54 +02:00 |
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