Matiss Ozols
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e8ce4fe8df
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added leicester profile
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2021-10-21 18:59:17 +01:00 |
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Matiss Ozols
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e9ba223103
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added leicester profile
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2021-10-21 18:55:03 +01:00 |
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Matiss Ozols
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f8b932ae2d
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added leicester profile
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2021-10-21 18:32:57 +01:00 |
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James A. Fellows Yates
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5afa43ad15
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Merge pull request #289 from jfy133/eva-fix
Remove broken 1240k profile for eager@EVA
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2021-10-18 11:03:39 +02:00 |
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James A. Fellows Yates
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ffdb0a937f
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Take previous working one I think
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2021-10-18 10:58:06 +02:00 |
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James A. Fellows Yates
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b269a577e6
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Revert 1240k
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2021-10-18 10:52:28 +02:00 |
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James A. Fellows Yates
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7f94989b39
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Merge pull request #288 from nf-core/TCLamnidis-patch-1
added 1240k profile
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2021-10-18 08:45:19 +02:00 |
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Thiseas C. Lamnidis
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e741ecb7a7
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Update eva.config
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2021-10-13 13:04:41 +02:00 |
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Thiseas C. Lamnidis
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92648c1c1f
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added 1240k profile
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2021-10-12 15:12:49 +02:00 |
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Mahesh Binzer-Panchal
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8d68d76a44
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Merge pull request #287 from mahesh-panchal/add_snic_tmp
Add SNIC_TMP to config
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2021-10-11 10:38:50 +02:00 |
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Mahesh Binzer-Panchal
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ac815ce790
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Merge branch 'master' into add_snic_tmp
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2021-10-11 09:57:49 +02:00 |
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Pontus Freyhult
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33ae41bc91
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Merge pull request #226 from pontus/master
UPPMAX: Allow jobs needing more memory than thin nodes, pick up cluster info through slurm
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2021-10-10 12:05:07 +02:00 |
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James A. Fellows Yates
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73b6b74c69
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Merge pull request #279 from pierrespc/master
Added Configuration files for running in Maestro HPC at Pasteur Institute, Paris
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2021-10-08 19:15:47 +02:00 |
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James A. Fellows Yates
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98bbc2b744
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Linting
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2021-10-08 14:11:39 +02:00 |
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James A. Fellows Yates
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b26e495e19
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Apply suggestions from code review
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2021-10-08 14:08:51 +02:00 |
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pierrespc
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2d102eafbc
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format docs
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2021-10-08 13:46:47 +02:00 |
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Mahesh Binzer-Panchal
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747a89b4c5
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Update conf/uppmax.config
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2021-10-08 13:40:59 +02:00 |
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pierrespc
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035ab61f61
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added unlimitedtime profile to maestro; changed cache for bwa process
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2021-10-08 09:05:46 +02:00 |
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Mahesh Binzer-Panchal
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e557e94bfb
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Add SNIC_TMP to config
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2021-10-07 16:05:03 +02:00 |
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FriederikeHanssen
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4f8b0d6478
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Merge pull request #286 from FriederikeHanssen/cfc
Update sarek - cfc specific config
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2021-10-05 10:50:08 +02:00 |
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FriederikeHanssen
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f1756ba121
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Merge branch 'nf-core:master' into cfc
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2021-10-04 18:04:18 +02:00 |
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pierrespc
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1621585558
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improving documentation
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2021-10-04 16:08:33 +02:00 |
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pierrespc
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e5d4a357c5
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clean doc
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2021-10-04 15:08:01 +02:00 |
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Falko Hofmann
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0950eb3518
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Merge pull request #251 from phue/cbe_singularity_workaround
cbe: send SIGUSR2 upon job termination
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2021-10-04 13:24:53 +02:00 |
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Rike
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f6e16f2872
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Add check_resource to respect max_resource/max_cpus
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2021-10-04 10:14:02 +02:00 |
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pierrespc
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136fd44e0c
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corrected docs/maestro.config
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2021-09-29 13:50:56 +02:00 |
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pierrespc
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f6266879d6
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edited maestronuclear and maestromitocondrial configs. The latter has not been optimized yet
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2021-09-29 13:47:35 +02:00 |
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pierrespc
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b71df6fe57
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renamed eager pipeline config file
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2021-09-29 13:22:07 +02:00 |
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pierrespc
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9ea3e2096a
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long and normal qos profiles defined now in an unique maestro config file. maestro.config also defined in pipeline/eager for ressources assignation to specific processes
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2021-09-29 13:11:14 +02:00 |
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James A. Fellows Yates
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8e554cd43c
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Merge pull request #285 from bbartholdy/master
Add ALICE cluster to profiles
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2021-09-28 13:57:16 +02:00 |
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Bjørn Peare Bartholdy
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e750a6d445
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Update conf/alice.config
Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
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2021-09-28 13:34:12 +02:00 |
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James A. Fellows Yates
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e8b48416bc
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Update docs/alice.md
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2021-09-28 12:52:31 +02:00 |
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Bjørn Peare Bartholdy
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ad83430632
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Update docs/alice.md
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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2021-09-28 12:43:54 +02:00 |
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Bjørn Peare Bartholdy
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197bd6cfb1
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Merge branch 'nf-core:master' into master
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2021-09-28 12:09:50 +02:00 |
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bbartholdy
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b6ccb46383
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add ALICE profile
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2021-09-28 12:08:27 +02:00 |
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Alexander Peltzer
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09418b5da9
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Merge pull request #284 from projectoriented/hasta
Add Hasta config
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2021-09-28 11:20:16 +02:00 |
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Mei Wu
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79a79f7d8d
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added pipeline-specific config
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2021-09-28 10:38:25 +02:00 |
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Mei Wu
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735100ed0b
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updated readme
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2021-09-27 16:37:34 +02:00 |
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Mei Wu
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c2d74b290a
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fix md
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2021-09-27 16:25:02 +02:00 |
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Mei Wu
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a8a2027f70
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Merge branch 'master' into hasta
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2021-09-27 16:12:23 +02:00 |
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Mei Wu
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d3b92bad9d
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fix lint
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2021-09-27 16:11:18 +02:00 |
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Mei Wu
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06fac1dcfc
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initial commit
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2021-09-27 16:05:32 +02:00 |
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Mei Wu
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ae0adb056f
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initial commit
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2021-09-27 16:05:19 +02:00 |
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Alexander Peltzer
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acada75ffe
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Merge pull request #282 from aunderwo/master
Add longer time for long queue
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2021-09-23 16:17:17 +02:00 |
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Anthony Underwood
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3701137740
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Merge branch 'nf-core:master' into master
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2021-09-23 12:03:38 +01:00 |
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Anthony Underwood
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6a970dc4a8
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update max time for long queue
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2021-09-23 11:59:45 +01:00 |
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Patrick Hüther
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1cbe2759c4
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fix invalid rapid qos selection
it only applies to the c partition
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2021-09-22 11:54:27 +02:00 |
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pierrespc
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3e22b85b02
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maestro only for normal qos
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2021-09-22 10:13:46 +02:00 |
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Harshil Patel
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f4c240790a
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Merge pull request #281 from aunderwo/master
update sanger profile so that long jobs to be submitted to the long queue
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2021-09-21 20:47:58 +01:00 |
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Anthony Underwood
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50df2105fb
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update long jobs to be submitted to the long queue
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2021-09-21 14:42:59 +01:00 |
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