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feat/julia-rewrite

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• f1072a4bb7
  
  feat: Add biom conversion step feat/julia-rewrite Thomas A. Christensen II 2025-04-18 18:27:14 -05:00
• e5db185133
  
  feat: Add DataFrame compat to cache Thomas A. Christensen II 2025-04-18 18:26:43 -05:00
• 630385829f fixup! feat: Add feature table manipulation Thomas A. Christensen II 2025-04-18 18:25:48 -05:00
• 9d124cb796 fixup! feat: Add feature table manipulation Thomas A. Christensen II 2025-04-18 18:25:21 -05:00
• 4462ddab66 fixup! feat: Add feature table manipulation Thomas A. Christensen II 2025-04-18 18:25:21 -05:00
• 0c09cd9e33 fixup! feat: Add feature table manipulation Thomas A. Christensen II 2025-04-18 18:25:21 -05:00
• 30600e5e18
  
  feat: Add feature table manipulation Thomas A. Christensen II 2025-04-18 17:07:53 -05:00
• 5c74bf3d69 fixup! feat: Add caching function Thomas A. Christensen II 2025-04-18 16:08:48 -05:00
• e0b6a056ff
  
  refactor: Switch to using cached file processes in Metaxa Thomas A. Christensen II 2025-04-18 16:07:59 -05:00
• d97c0898bc
  
  feat: Add caching function Thomas A. Christensen II 2025-04-18 16:06:56 -05:00
• 516cc4985c
  
  refactor: Make exec_in_temp_dir more generic Thomas A. Christensen II 2025-04-18 08:35:53 -05:00
• 7b3cb740d9
  
  meta: Add input files to gitignore Thomas A. Christensen II 2025-04-15 16:20:38 -05:00
• adfef5b9b3
  
  refactor: Use FilePathsBase for all file paths Thomas A. Christensen II 2025-04-15 16:19:09 -05:00
• 0f7102b9de
  
  fix: Make metaxa2_dc use relative paths instead of absolute Thomas A. Christensen II 2025-04-15 15:20:47 -05:00
• 10fdcd7b3f
  
  perf: Make conda not re-init an existing env Thomas A. Christensen II 2025-04-14 16:50:32 -05:00
• 418c7f1088
  
  fix: Don't copy over a directory with a file Thomas A. Christensen II 2025-04-14 16:00:52 -05:00
• 8e68ea3028
  
  fix: add run to metaxa_dc command Thomas A. Christensen II 2025-04-14 15:49:03 -05:00
• 3130e92395
  
  feat: Add metaxa steps Thomas A. Christensen II 2025-04-14 11:12:41 -05:00
• 9df8163123
  
  style: Add formatter requirements Thomas A. Christensen II 2025-04-11 21:05:13 -05:00
• 81f49a8ad8
  
  feat: Add Conda environment installer Thomas A. Christensen II 2025-04-11 21:01:45 -05:00
• 9a91fed82f
  
  feat: Bootstrap basic package Thomas A. Christensen II 2025-04-11 09:27:43 -05:00
• 0c1ba0470b
  
  Basic cleanup master Thomas A. Christensen II 2021-06-02 08:29:01 -05:00
• bbc3f91d56
  
  Correct rarefaction instructions in README Thomas A. Christensen II 2021-04-21 12:34:59 -06:00
• 8c785a5926
  
  Fix link formatting Thomas A. Christensen II 2021-04-21 12:15:44 -06:00
• 99b3f14677
  
  README formatting Thomas A. Christensen II 2021-04-21 12:10:13 -06:00
• a4bd3058cf
  
  Create README Thomas A. Christensen II 2021-04-21 12:04:03 -06:00
• f0c97ab6ea
  Create LICENSE Thomas A. Christensen II 2021-04-21 11:34:41 -06:00
• 52ddd10d57 Fixed find and xargs to actually work together Thomas Allen Christensen II 2019-05-24 11:21:45 -06:00
• ff276e74fa Fixed all shellcheck issues Thomas A. Christensen II 2019-05-21 10:28:18 -06:00
• 83e9059bb6 Fixed bug in alpha rarefaction curve Thomas A. Christensen II 2019-05-21 07:55:55 -06:00
• bb500ca3ad Fixed gitignore Thomas A. Christensen II 2019-05-16 23:31:51 -06:00
• 5343dceb1f Added predictive modeling capabilities Thomas A. Christensen II 2019-05-16 23:25:37 -06:00
• c5121e4ed6 Added additional files to gitignore Thomas A. Christensen II 2019-05-16 23:25:22 -06:00
• 2151207c45 Added gitignore Thomas A. Christensen II 2019-05-16 23:08:45 -06:00
• 4d3f3b33ba Added automated rarefaction selection Thomas A. Christensen II 2019-05-16 23:06:06 -06:00
• d1fadc00a9 Made parallel processing more efficent Thomas A. Christensen II 2019-05-16 22:44:54 -06:00
• 1f9512b70f Initial commit Thomas A. Christensen II 2019-05-13 10:09:48 -06:00