810 commits

This branch

This branch

All branches

Author	SHA1	Message	Date
drpatelh	9d500cf679	Reorder params	2021-02-15 17:02:26 +00:00
drpatelh	f283dfb2dc	Add ARTIC primer sets to genome config	2021-02-15 16:58:30 +00:00
James A. Fellows Yates	86566ddd3b	Merge pull request #204 from jfy133/master ... Add a 'big_data' profile for eager @ SHH	2021-02-04 15:07:52 +01:00
James A. Fellows Yates	e32f1e46ff	Update shh.config	2021-02-04 08:13:16 +01:00
James A. Fellows Yates	c515a401c7	Update shh.config	2021-02-04 08:06:35 +01:00
James A. Fellows Yates	82fe8a04be	Update shh.config	2021-02-04 08:02:33 +01:00
James A. Fellows Yates	e7ac0bae13	Update shh.config	2021-02-04 08:00:57 +01:00
James A. Fellows Yates	eb725f9ea3	Update shh.config	2021-02-03 20:13:09 +01:00
Alexander Peltzer	95791b04a4	Merge pull request #203 from oist/draftOISTconfig ... Institutional profile for the Okinawa Institute of Science and Technology (OIST)	2021-02-02 14:07:03 +01:00
Charles Plessy	1608b36dcf	Institutional profile for Okinawa Institute of Science and Technology	2021-02-02 17:40:10 +09:00
Thiseas C. Lamnidis	c33cedf4ed	Merge pull request #202 from nf-core/TCLamnidis-patch-1 ... Add debug profile	2021-01-26 15:20:56 +01:00
Thiseas C. Lamnidis	713a032a36	Add debug profile ... which deactivates cleanup of workdir after successful run	2021-01-26 15:08:21 +01:00
James A. Fellows Yates	5ba1b01c0c	Merge pull request #200 from nf-core/ceh-config ... Seg_globe config	2021-01-21 13:24:26 +01:00
James A. Fellows Yates	26d164ca74	Remove ceh profile for now	2021-01-21 13:15:08 +01:00
James A. Fellows Yates	c4604450d8	Update seg_globe.md	2021-01-21 13:04:12 +01:00
James A. Fellows Yates	7cffcf809b	Update main.yml	2021-01-21 12:50:14 +01:00
Åshild J. Vågene	765a2e0b7e	Update README.md	2021-01-21 11:55:00 +01:00
Åshild J. Vågene	8037b73ddd	Update nfcore_custom.config	2021-01-21 11:52:58 +01:00
Åshild J. Vågene	bcd137225e	Update and rename ceh.md to seg_globe.md	2021-01-21 11:46:46 +01:00
Åshild J. Vågene	594985f1ee	Update and rename ceh.config to seg_globe.config	2021-01-21 11:43:34 +01:00
Åshild J. Vågene	ef80452577	Update docs/ceh.md ... Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2021-01-21 11:16:46 +01:00
Åshild J. Vågene	8fa720b9cc	Update conf/ceh.config ... Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2021-01-21 11:15:06 +01:00
James A. Fellows Yates	2fd475c339	Fix some linting errors	2021-01-21 06:30:43 +01:00
James A. Fellows Yates	964cae4ac7	Add CEH to CI	2021-01-21 06:22:37 +01:00
Åshild J. Vågene	f8973f153a	Update ceh.config	2021-01-21 00:31:49 +01:00
Åshild J. Vågene	d108666950	Update ceh.md	2021-01-21 00:30:54 +01:00
Åshild J. Vågene	91594dffea	Update ceh.config	2021-01-21 00:29:43 +01:00
Åshild J. Vågene	22e6a60db1	Update README.md	2021-01-21 00:22:13 +01:00
Åshild J. Vågene	a6f316b58b	Update README.md	2021-01-21 00:21:13 +01:00
Åshild J. Vågene	65831b73ef	Create ceh.md	2021-01-21 00:17:08 +01:00
Åshild J. Vågene	8a8f95e364	Update nfcore_custom.config	2021-01-20 23:47:58 +01:00
Åshild J. Vågene	c11c26f15f	Create ceh.config	2021-01-20 23:45:26 +01:00
James A. Fellows Yates	1c25cb033b	Add big_data profile	2021-01-19 13:53:01 +01:00
Patrick Hüther	b63a8b0554	Merge pull request #199 from rbpisupati/cbe-conda ... cbe: add conda module as fallback	2021-01-15 13:06:48 +01:00
rbpisupati	9b5ac5c89d	added anaconda module for cbe	2021-01-15 12:55:46 +01:00
James A. Fellows Yates	a4c55b3ea9	Fix time limit 0-9 typo	2021-01-06 10:44:12 +01:00
Combiz Khozoie	ea2fd4be94	Merge pull request #197 from combiz/imperial ... Added institutional configs for Imperial and Imperial MEDBIO. Added …	2020-12-18 16:33:17 +00:00
Combiz Khozoie	17cf4e3b35	fixed indents	2020-12-18 15:34:56 +00:00
Combiz Khozoie	3824403b4e	removed workDir from Imperial configs	2020-12-18 10:31:36 +00:00
Combiz Khozoie	4bb52358f5	updated Github Actions YML	2020-12-18 10:27:40 +00:00
Combiz Khozoie	a61992d144	Added institutional configs for Imperial and Imperial MEDBIO. Added institutional pipeline configs for scflow for Imperial and Imperial MEDBIO	2020-12-18 10:21:26 +00:00
Alexander Peltzer	65e2ff56d8	Merge pull request #195 from marcel-keller/patch-1 ... change of directory for conda environments	2020-12-09 14:35:00 +01:00
marcel-keller	c9ceaff3b3	change of directory for conda environments ... change of directory due to recent changes in our infrastructure	2020-12-09 15:11:21 +02:00
Maxime Garcia	2fb205264e	Merge pull request #192 from arontommi/dev ... Documentation for Bianca	2020-12-09 11:09:23 +01:00
emnilsson	8cc2fc5ecb	Merge pull request #193 from emnilsson/master ... Modified ampliseq-specific uppmax-config	2020-12-02 13:40:43 +01:00
Alexander Peltzer	99985c658f	Merge pull request #194 from marcel-keller/ebc ... Update ebc.config	2020-11-26 14:12:33 +01:00
marcel-keller	5590a9743a	Update ebc.config ... queueSize to 64	2020-11-26 15:05:25 +02:00
arontommi	ac108379cd	trailing spaces	2020-11-26 13:58:16 +01:00
arontommi	c2c7265518	fix linting errors	2020-11-26 13:47:47 +01:00
Emelie Nilsso	7095101652	Merge branch 'master' of https://github.com/nf-core/configs	2020-11-26 13:43:42 +01:00