Matiss Ozols
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f8b932ae2d
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added leicester profile
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2021-10-21 18:32:57 +01:00 |
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James A. Fellows Yates
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ffdb0a937f
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Take previous working one I think
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2021-10-18 10:58:06 +02:00 |
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James A. Fellows Yates
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b269a577e6
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Revert 1240k
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2021-10-18 10:52:28 +02:00 |
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Thiseas C. Lamnidis
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e741ecb7a7
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Update eva.config
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2021-10-13 13:04:41 +02:00 |
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Thiseas C. Lamnidis
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92648c1c1f
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added 1240k profile
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2021-10-12 15:12:49 +02:00 |
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Mahesh Binzer-Panchal
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ac815ce790
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Merge branch 'master' into add_snic_tmp
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2021-10-11 09:57:49 +02:00 |
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Pontus Freyhult
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33ae41bc91
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Merge pull request #226 from pontus/master
UPPMAX: Allow jobs needing more memory than thin nodes, pick up cluster info through slurm
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2021-10-10 12:05:07 +02:00 |
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James A. Fellows Yates
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73b6b74c69
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Merge pull request #279 from pierrespc/master
Added Configuration files for running in Maestro HPC at Pasteur Institute, Paris
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2021-10-08 19:15:47 +02:00 |
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Mahesh Binzer-Panchal
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747a89b4c5
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Update conf/uppmax.config
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2021-10-08 13:40:59 +02:00 |
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pierrespc
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035ab61f61
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added unlimitedtime profile to maestro; changed cache for bwa process
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2021-10-08 09:05:46 +02:00 |
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Mahesh Binzer-Panchal
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e557e94bfb
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Add SNIC_TMP to config
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2021-10-07 16:05:03 +02:00 |
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FriederikeHanssen
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f1756ba121
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Merge branch 'nf-core:master' into cfc
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2021-10-04 18:04:18 +02:00 |
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pierrespc
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1621585558
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improving documentation
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2021-10-04 16:08:33 +02:00 |
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pierrespc
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e5d4a357c5
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clean doc
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2021-10-04 15:08:01 +02:00 |
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Falko Hofmann
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0950eb3518
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Merge pull request #251 from phue/cbe_singularity_workaround
cbe: send SIGUSR2 upon job termination
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2021-10-04 13:24:53 +02:00 |
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Rike
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f6e16f2872
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Add check_resource to respect max_resource/max_cpus
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2021-10-04 10:14:02 +02:00 |
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pierrespc
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f6266879d6
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edited maestronuclear and maestromitocondrial configs. The latter has not been optimized yet
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2021-09-29 13:47:35 +02:00 |
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pierrespc
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b71df6fe57
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renamed eager pipeline config file
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2021-09-29 13:22:07 +02:00 |
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pierrespc
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9ea3e2096a
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long and normal qos profiles defined now in an unique maestro config file. maestro.config also defined in pipeline/eager for ressources assignation to specific processes
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2021-09-29 13:11:14 +02:00 |
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Bjørn Peare Bartholdy
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e750a6d445
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Update conf/alice.config
Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
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2021-09-28 13:34:12 +02:00 |
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Bjørn Peare Bartholdy
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197bd6cfb1
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Merge branch 'nf-core:master' into master
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2021-09-28 12:09:50 +02:00 |
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bbartholdy
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b6ccb46383
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add ALICE profile
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2021-09-28 12:08:27 +02:00 |
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Mei Wu
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79a79f7d8d
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added pipeline-specific config
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2021-09-28 10:38:25 +02:00 |
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Mei Wu
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c2d74b290a
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fix md
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2021-09-27 16:25:02 +02:00 |
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Mei Wu
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a8a2027f70
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Merge branch 'master' into hasta
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2021-09-27 16:12:23 +02:00 |
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Mei Wu
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06fac1dcfc
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initial commit
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2021-09-27 16:05:32 +02:00 |
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Mei Wu
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ae0adb056f
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initial commit
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2021-09-27 16:05:19 +02:00 |
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Anthony Underwood
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6a970dc4a8
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update max time for long queue
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2021-09-23 11:59:45 +01:00 |
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Patrick Hüther
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1cbe2759c4
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fix invalid rapid qos selection
it only applies to the c partition
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2021-09-22 11:54:27 +02:00 |
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pierrespc
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3e22b85b02
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maestro only for normal qos
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2021-09-22 10:13:46 +02:00 |
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Anthony Underwood
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50df2105fb
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update long jobs to be submitted to the long queue
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2021-09-21 14:42:59 +01:00 |
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pierrespc
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3b593d46ec
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merged two pasteur config files for maestro
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2021-09-20 15:14:50 +02:00 |
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Harshil Patel
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5068e4806f
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Merge pull request #271 from theoportlock/master
Adds Rosalind config for KCL!
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2021-09-17 13:36:19 +01:00 |
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Harshil Patel
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3b95fd9ee3
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Update conf/rosalind.config
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2021-09-17 13:15:09 +01:00 |
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theoportlock
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9116a09afe
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Fixes formatting and ignore_params
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2021-09-17 13:21:32 +02:00 |
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pierrespc
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4614ff6f45
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change max mem in Normal
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2021-09-16 16:50:45 +02:00 |
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pierrespc
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de2a745fde
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change type in Normal name
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2021-09-16 16:48:26 +02:00 |
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pierrespc
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482e7cf8de
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2 config files for Maestro HPC at Pasteur Institute, Paris
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2021-09-16 12:40:56 +02:00 |
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Marc Trunjer Kusk Nielsen
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a55c3c04eb
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Update computerome.config
Adding genomes and modules back into schema_ingore_params to avoid warnings about unexpected parameters.
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2021-09-15 19:54:51 +02:00 |
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Marc Trunjer Kusk Nielsen
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8b29b5584e
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Update computerome.config
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2021-09-15 14:20:02 +02:00 |
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Marc Trunjer Kusk Nielsen
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ab8a9ad0b8
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Update computerome.config
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2021-09-15 13:27:23 +02:00 |
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theoportlock
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9c97220919
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Merge branch 'master' of https://github.com/theoportlock/configs
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2021-09-15 11:43:09 +02:00 |
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theoportlock
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3c86f8f47c
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Removes the broken clusterOptions
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2021-09-15 11:42:43 +02:00 |
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Marc Trunjer Kusk Nielsen
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aad70fe86d
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Merge branch 'nf-core:master' into computerome
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2021-09-15 11:08:48 +02:00 |
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Marc Trunjer Kusk Nielsen
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29003e13f1
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Update computerome.config
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2021-09-15 10:22:57 +02:00 |
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James A. Fellows Yates
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a7b1183065
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Remove 1CPU for host removal fastq
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2021-09-14 11:52:21 +02:00 |
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Marc Trunjer Kusk Nielsen
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86e21b378a
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Update computerome.config
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2021-09-13 14:26:10 +02:00 |
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Marc Trunjer Kusk Nielsen
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275288632d
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Update computerome.config
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2021-09-13 14:22:22 +02:00 |
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Marc Trunjer Kusk Nielsen
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366f945a40
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Update computerome.config
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2021-09-13 14:20:55 +02:00 |
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Marc Trunjer Kusk Nielsen
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8ebdd43898
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Update computerome.config
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2021-09-13 14:01:35 +02:00 |
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