millironx
/
nf-configs
mirror of https://github.com/MillironX/nf-configs
1
0
Fork 0
Code Issues Packages Releases Activity
1,844 Commits
4 Branches
0 Tags
1.9 MiB
master
custom-eager-crick
kevbrick-patch-1
olgabot-patch-2
Branches Tags
${ item.name }
Create tag ${ searchTerm }
Create branch ${ searchTerm }
from 'master'
${ noResults }
Commit Graph

1844 Commits (master)
 

Author SHA1 Message Date
Giuseppe Martone 2479c1e7e8
Update tigem.md 2 years ago
Giuseppe Martone da0482a904
Create tigem.md 2 years ago
Giuseppe Martone ce39096f32
Create tigem.config 2 years ago
lquayle88 584052cfff Revised base and all pipeline configs to provide memory on per core basis 2 years ago
lquayle88 3f2ffa314d Revised base and sarek configs to provide memory on per core basis 2 years ago
Cedric 2825f33ded
conda env setup improvement 2 years ago
Cedric d429a59a0d
add automounts for singularity 2 years ago
Cedric Arisdakessian e89cb7bd5e fix indentation 2 years ago
Cedric Arisdakessian 3b8b170203 added mana in gh actions 2 years ago
Cedric Arisdakessian 9cc679c811 fix mana name 2 years ago
Cedric Arisdakessian 7b1e360a35 added mana 2 years ago
Cedric Arisdakessian 9b710a07f5 add mana config 2 years ago
Cedric Arisdakessian 32cdea4b59 documentation for mana config 2 years ago
Cedric Arisdakessian c479780d8f create mana config 2 years ago
lquayle88 e7ac3ecd19 Modified resource requests in sbc_sharc.config for sarek 2 years ago
lquayle88 9b451b53b7 Increased cpus and memory for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek 2 years ago
lquayle88 10c1490265 Increased memory and time for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek 2 years ago
lquayle88 dbb3b3b44b Reinstated maxRetries and increased memory for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek 2 years ago
lquayle88 8103718389 Reduced maxRetries upon error in sbc_sharc.config for sarek 2 years ago
Lewis Quayle 1eea9b464a
Merge branch 'nf-core:master' into sbc_sharc 2 years ago
Bruno Grande 57f63add02
Merge pull request #417 from Sage-Bionetworks-Workflows/bgrande/sage-improve-downloads 
Improve reliability of file transfers with retries and reduced concurrency
 2 years ago
Bruno Grande 735df9ef76
Merge branch 'master' into bgrande/sage-improve-downloads 2 years ago
Patrick Hüther 51ae760889
Merge pull request #413 from phue/biohpc_charliecloud_patch 
biohpc_gen: update required modules
 2 years ago
Lewis Quayle e89114df8d
Merge branch 'nf-core:master' into sbc_sharc 2 years ago
lquayle88 c42a5a9a94 Updated resources requested by pipelines 2 years ago
James A. Fellows Yates 93978cd673
Merge branch 'master' into gis-branch 2 years ago
James A. Fellows Yates 2b1141e9c9
Merge pull request #420 from SPPearce/crukmi 
Update crukmi.config
 2 years ago
lquayle88 ab1ad832df Updated resource requests for compatibility with high memory nodes 2 years ago
Simon Pearce 17c3767fef
Update crukmi.config 
Fix the singularity cache dir and add process_single.
 2 years ago
Lewis Quayle 7541ffb666
Merge branch 'nf-core:master' into sbc_sharc 2 years ago
lquayle88 7e34beb3c9 Updated resource requests for compatibility with general worker nodes 2 years ago
Martin Proks 0d4ecaeb6d
Merge pull request #419 from AdrijaK/master 
add config for KU_SUND_DANGPU
 2 years ago
AdrijaK 798d845a0d run prettier 2 years ago
Adrija Kalvisa 65b6bf7c62
add ku_sund_dangpu 2 years ago
Adrija Kalvisa 339a072884
fix typo 2 years ago
Adrija Kalvisa 55d7b3fc00
add KU SUND DANGPU 
add the profile for Dangpu server hosted by Novo Nordisk Foundation Center for Stem Cell Medicine (reNEW)/ Novo Nordisk Foundation Center for Protein Research (CPR)
 2 years ago
Adrija Kalvisa 5315ddd92f
add KU_SUND_DANGPU 2 years ago
Adrija Kalvisa ce916bf4b5
fix typo 2 years ago
Adrija Kalvisa 2e9578498a
add ku_sund_dangpu.config 2 years ago
Adrija Kalvisa 7959b14385
Merge branch 'nf-core:master' into master 2 years ago
Austyn Trull 5400df135d
Merge pull request #412 from nf-core/cheaha_env_variable_updates 
Fix cheaha config due to use of incorrect variable
 2 years ago
lquayle88 1471257aaf Modified config for job submit rate 2 years ago
Lewis Quayle 9ee0bdc580
Merge branch 'nf-core:master' into sbc_sharc 2 years ago
lquayle88 adc88cfa1f Added config for limiting queue size and job submit rate 2 years ago
Patrick Hüther 85aa6adeed
Merge branch 'master' into biohpc_charliecloud_patch 2 years ago
Gisela Gabernet 89dc3c429f
Merge pull request #418 from ggabernet/master 
update cfc config maintenance
 2 years ago
ggabernet c709be3b59 update cfc config maintenance 2 years ago
Bruno Grande 8bb9361359 Improve reliability of file transfers 2 years ago
lquayle88 55971bb94d Modularised error handling strategy to per pipeline basis 2 years ago
James A. Fellows Yates c9c4d02f0d
Merge pull request #416 from jfy133/master 
Add HKI cluster
 2 years ago