Annick Renevey
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bfeafdbf25
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Merge pull request #408 from nf-core/rnafusion_config_hasta
rnafusion setup for hasta usage [WIP]
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2 years ago |
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Annick Renevey
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242101db16
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fix extra space
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2 years ago |
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Annick Renevey
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0851903f66
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include new config in pipeline configs file
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2 years ago |
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Annick Renevey
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51871ea6fc
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rnafusion setup for hasta usage
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2 years ago |
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Lara Ianov
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08b62ede83
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Merge pull request #404 from nf-core/cheaha_singularity_update
Cheaha Config Update
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2 years ago |
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Austyn Trull
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90f638d376
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Updating the cheaha documentation to clarify that /data/temporary-scratch/atrull will be used as storage for files that would normally go into one of the temporary locations when using Singularity
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2 years ago |
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James A. Fellows Yates
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b33aef1431
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Merge pull request #386 from andrewfrank/patch-2
Update google.config to fix custom VM memory error
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2 years ago |
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James A. Fellows Yates
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c70a95f9c9
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Merge branch 'master' into patch-2
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2 years ago |
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Bruno Grande
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9c8cb71bc7
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Merge branch 'master' into bgrande/sage-aws
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2 years ago |
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Bruno Grande
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317e5a16cb
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Improve AWS-related config for Sage profile
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2 years ago |
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Harshil Patel
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84b0b705a2
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Merge pull request #405 from drpatelh/monkeypox
Replace NC_063383.1 fasta and gff and add Nextclade config
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2 years ago |
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kalayaneech
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93c4ba67a0
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adding adcra configuration
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2 years ago |
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Harshil Patel
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8b9661825b
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Replace NC_063383.1 fasta and gff and add Nextclade config
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2 years ago |
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Harshil Patel
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d71e31c378
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Merge pull request #403 from drpatelh/monkeypox
Add monkeypox genome files to viralrecon genome config file
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2 years ago |
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Harshil Patel
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8dcfcfd856
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Add monkeypox genome files to viralrecon genome config file
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2 years ago |
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Austyn Trull
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8d5ae4c3ab
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Committing changes made by Brandon Wilk so that singularity containers will use scratch space
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2 years ago |
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Ramprasad Neethiraj
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49c71e0c28
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Merge pull request #363 from ramprasadn/feat/hasta_update
Add a profile for stubruns in hasta
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2 years ago |
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Ramprasad Neethiraj
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9182b55acc
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Merge branch 'master' into feat/hasta_update
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2 years ago |
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Anders Jemt
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9c26cfddaa
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Merge pull request #390 from raysloks/feat/hasta_java_memory_fix
Feat/hasta java memory fix
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2 years ago |
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Ramprasad Neethiraj
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7ff2977a29
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Merge branch 'master' of github.com:nf-core/configs into feat/hasta_update
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2 years ago |
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Ramprasad Neethiraj
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dd63dee7aa
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update conf
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2 years ago |
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Ramprasad Neethiraj
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1c942759ea
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update sentieon
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2 years ago |
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Ramprasad Neethiraj
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a6cce4ab6a
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Merge branch 'master' into feat/hasta_java_memory_fix
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2 years ago |
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Phil Ewels
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ea89504bc7
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Merge pull request #397 from ErikDanielsson/add-citation-cff
Add `CITATION.cff` for the nf-core publication
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2 years ago |
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SPearce
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8ae3cba5e3
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Reduce MPILEUP to 5GB
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2 years ago |
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SPearce
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d0662a3acb
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Ran prettier
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2 years ago |
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SPearce
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a97b887d93
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Written a help file
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2 years ago |
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SPearce
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0bfedde296
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Initial attempt at a CRUKMI config file
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2 years ago |
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Gwenna Breton
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99df08f409
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Merge pull request #395 from ClinicalGenomicsGBG/medair
New config: Add config for Medair
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2 years ago |
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Gwenna Breton
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0e4f2b40d3
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Added email of IT group
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2 years ago |
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Gwenna Breton
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ffefefe0ab
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Added contact emails
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2 years ago |
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Gwenna Breton
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2740b5efbf
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Update docs/medair.md
Fixed typo
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
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2 years ago |
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Gwenna Breton
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648025c1ce
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Clarified where to store singularity images
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2 years ago |
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Gwenna Breton
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6aa78833c3
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Merge branch 'master' into medair
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2 years ago |
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James A. Fellows Yates
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0b47849532
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Update mpcdf.config
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2 years ago |
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Alexander Peltzer
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36487c8c25
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Merge pull request #399 from nf-core/sanger
Sanger
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2 years ago |
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Matthieu Muffato
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dda1d810b1
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Latest stable version (rather than an edge one)
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2 years ago |
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Matthieu Muffato
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1ee20f0bb0
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2 cores should be enough for the nextflow manager itself
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2 years ago |
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Matthieu Muffato
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60dc451569
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The oversubscribed queue is recommended for workflow managers
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2 years ago |
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Matthieu Muffato
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1f1a9ac5f0
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ISG provide the module, not the pathogen informatics team
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2 years ago |
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Matthieu Muffato
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2aad355fbf
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The config doesn't mandate Singularity any more (Conda is fine too)
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2 years ago |
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Priyanka Surana
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fd87fbcb9d
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Sanger profile update
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2 years ago |
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Priyanka Surana
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58508c4fbc
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Sanger profile update
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2 years ago |
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Maxime U. Garcia
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a02bd46617
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Merge pull request #398 from nvnieuwk/lower-submission-rate-for-vsc_ugent
lower submission rate for vsc_ugent
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2 years ago |
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Nicolas Vannieuwkerke
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f40825ac14
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lower submission rate for vsc_ugent
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2 years ago |
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Alexander Peltzer
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c6d59bf633
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Merge pull request #396 from drpatelh/nextclade
Update default Nextclade dataset to 2022-06-14T12:00:00Z
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2 years ago |
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Erik Danielsson
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5d7789792f
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Add CITATION.cff and update .editorconfig
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2 years ago |
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Harshil Patel
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2ab126fa4d
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Update default Nextclade dataset to 2022-06-14T12:00:00Z
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2 years ago |
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qlr900
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ff55ec67b4
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update to current java+nextflow module combination
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2 years ago |
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Gwenna Breton
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6b9cdc8ef3
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Added info about Sentieon singularities
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2 years ago |