Priyanka Surana
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58508c4fbc
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Sanger profile update
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2022-07-20 13:14:42 +01:00 |
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Nicolas Vannieuwkerke
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f40825ac14
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lower submission rate for vsc_ugent
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2022-07-14 15:50:50 +02:00 |
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Harshil Patel
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2ab126fa4d
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Update default Nextclade dataset to 2022-06-14T12:00:00Z
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2022-07-11 18:28:41 +01:00 |
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James A. Fellows Yates
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a141ff626b
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Merge branch 'master' into eva-java-correction
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2022-07-04 13:35:50 +02:00 |
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Nicolas Vannieuwkerke
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8a74c517d4
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Merge branch 'vsc-ugent-fix' of github.com:nvnieuwk/configs into vsc-ugent-fix
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2022-07-01 16:16:22 +02:00 |
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Nicolas Vannieuwkerke
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1e34595280
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removed queue size limit
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2022-07-01 16:16:18 +02:00 |
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nvnieuwk
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5ff845cde7
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Merge branch 'master' into vsc-ugent-fix
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2022-07-01 16:10:45 +02:00 |
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Nicolas Vannieuwkerke
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fa949a069e
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added queuesize
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2022-07-01 16:01:19 +02:00 |
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Nicolas Vannieuwkerke
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abfa3f47f4
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lowered the job submit rate of vsc_ugent
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2022-07-01 15:55:44 +02:00 |
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Bruno Grande
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6f0d9e6c43
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Complete check_max() move to global config
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2022-06-23 10:10:28 -07:00 |
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Bruno Grande
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a19d79f6ff
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Move check_max() to global config
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2022-06-23 09:44:16 -07:00 |
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Bruno Grande
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1c7230cb08
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Add Sage-specific Sarek config
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2022-06-23 09:15:42 -07:00 |
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Bruno Grande
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37121faf4a
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Fix typoe with label name
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2022-06-22 14:37:43 -07:00 |
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Bruno Grande
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ecd898584d
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Handle Sarek-specific max labels
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2022-06-22 13:54:13 -07:00 |
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Bruno Grande
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c7093dee13
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Reduce max_memory to fit on an instance
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2022-06-16 12:37:32 -07:00 |
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James Fellows Yates
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acabcbd9e8
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Use _JAVA_OPTIONS instead
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2022-06-15 15:27:40 +02:00 |
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James Fellows Yates
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76b0d1dd85
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Merge branch 'eva-java-correction' of github.com:jfy133/nf-core-configs into eva-java-correction
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2022-06-15 15:22:25 +02:00 |
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James Fellows Yates
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58dd9d49c7
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Move beforeScript exports to env scope
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2022-06-15 15:21:20 +02:00 |
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Bruno Grande
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2898736cbe
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Add Sage Bionetworks nf-core configuration
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2022-06-08 14:16:52 -07:00 |
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Nicolas Vannieuwkerke
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b6d38859f0
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fix for singularity cache for vsc_ugent profile
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2022-06-08 16:28:28 +02:00 |
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Nicolas Vannieuwkerke
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98eacf030d
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fix for singularity cache for vsc_ugent profile
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2022-06-08 16:27:48 +02:00 |
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Maxime U. Garcia
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844d250011
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Merge branch 'master' into eva-java-correction
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2022-06-07 11:57:05 +02:00 |
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Nicolas Vannieuwkerke
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44e25830e4
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update for vsc_ugent
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2022-06-07 11:33:22 +02:00 |
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James A. Fellows Yates
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46fba9c597
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Update eva.config
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2022-06-03 21:10:48 +02:00 |
|
James A. Fellows Yates
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05cc8a08f1
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Update eva.config
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2022-06-03 21:08:19 +02:00 |
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Åshild J. Vågene
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ed526530d2
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Rename mjolnir_globe to mjolnir_globe.config
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2022-06-03 17:15:12 +02:00 |
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Åshild J. Vågene
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22ed36a73d
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cacheDir update
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2022-06-03 15:33:58 +02:00 |
|
James Fellows Yates
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9ef52af084
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Increase overhead
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2022-06-03 14:24:27 +02:00 |
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James Fellows Yates
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c40ebb9acf
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Add overhead for get_software_versions
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2022-06-03 14:21:41 +02:00 |
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James Fellows Yates
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df0429ce9d
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Replace oracle specific _JAVA_OPTIONS to portable JAVA_TOOLS_OPTIONS
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2022-06-03 14:20:39 +02:00 |
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Phil Ewels
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b51059a3ae
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Merge branch 'master' into config_ucph-mjolnir_ash
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2022-06-03 13:21:36 +02:00 |
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James A. Fellows Yates
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7353fb257d
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Merge pull request #380 from jfy133/taxprofiler
Add MAG @ EVA profile
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2022-06-03 12:54:47 +02:00 |
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James Fellows Yates
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5a67eba04c
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Add MAG @ EVA profile
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2022-06-03 12:41:08 +02:00 |
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Åshild J. Vågene
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9b9a6f0188
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Update and rename holo_globe to mjolnir_globe
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2022-06-02 15:09:52 +02:00 |
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Åshild J. Vågene
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6d9cc91c5f
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Update holo_globe
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2022-06-02 15:03:47 +02:00 |
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Åshild J. Vågene
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64fe4677b1
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Update holo_globe
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2022-05-31 15:26:23 +02:00 |
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Åshild J. Vågene
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0b51552e88
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Update holo_globe
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2022-05-31 15:23:43 +02:00 |
|
Emil Bertilsson
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80e2a50a2f
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Merge pull request #378 from raysloks/feat/hasta_java_memory_fix
Feat/hasta java memory fix
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2022-05-30 14:40:52 +02:00 |
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Emil
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8453f6b41a
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Moves qualimap arg to pipeline-specific config
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2022-05-30 12:58:12 +02:00 |
|
Emil
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29fa08c434
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Adds _JAVA_OPTIONS to singularity whitelist
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2022-05-30 11:07:24 +02:00 |
|
Emil
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19497a4183
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Makes qualimap fix work for most memory amounts
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2022-05-30 11:06:48 +02:00 |
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Åshild J. Vågene
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bb25c77e7c
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Update holo_globe
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2022-05-20 17:01:30 +02:00 |
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Åshild J. Vågene
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d3e5c79fb4
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Create holo_globe
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2022-05-20 15:44:20 +02:00 |
|
Nicolas Vannieuwkerke
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c2b26a734d
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automated the internal cache dir location for singularity
|
2022-05-20 09:48:19 +02:00 |
|
Nicolas Vannieuwkerke
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cc86e6b270
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Added the VSC UGent profile
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2022-05-20 09:12:18 +02:00 |
|
Sarah Guinchard
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be9711731a
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Merge pull request #375 from nf-core/ifb_core-config-update
Ifb core config update
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2022-05-13 14:45:44 +02:00 |
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Sarah Guinchard
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3538f8511a
|
removed comment
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2022-05-12 11:02:42 +02:00 |
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sofstam
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54b3cda34d
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Add review suggestion
|
2022-05-12 11:00:26 +02:00 |
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Sarah Guinchard
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6bb7c1a422
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Update config file with queue & correct ressources
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2022-05-12 10:55:00 +02:00 |
|
sofstam
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c59149d64c
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Update docs for hasta config
|
2022-05-12 10:47:03 +02:00 |
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