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373 commits

Author SHA1 Message Date
Gwenna Breton
f718025e79 Added doc file for medair 2022-06-30 11:43:04 +02:00
Bruno Grande
6f0d9e6c43 Complete check_max() move to global config 2022-06-23 10:10:28 -07:00
Bruno Grande
1c7230cb08 Add Sage-specific Sarek config 2022-06-23 09:15:42 -07:00
Bruno Grande
2898736cbe Add Sage Bionetworks nf-core configuration 2022-06-08 14:16:52 -07:00
Åshild J. Vågene
34feaa8b6b
prettier output 2022-06-03 17:08:15 +02:00
Åshild J. Vågene
2d82218318
typo 2022-06-03 16:42:08 +02:00
Åshild J. Vågene
144ca851c1
Update mjolnir_globe.md 2022-06-03 15:36:19 +02:00
Phil Ewels
b51059a3ae
Merge branch 'master' into config_ucph-mjolnir_ash 2022-06-03 13:21:36 +02:00
James A. Fellows Yates
7353fb257d
Merge pull request #380 from jfy133/taxprofiler
Add MAG @ EVA profile
2022-06-03 12:54:47 +02:00
James A. Fellows Yates
97d57539e3
Apply suggestions from code review
Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
2022-06-03 12:51:20 +02:00
James Fellows Yates
5a67eba04c Add MAG @ EVA profile 2022-06-03 12:41:08 +02:00
Åshild J. Vågene
1d23ba9264
change name of tmp dir to .tmp_nfcore 2022-06-02 16:40:29 +02:00
Åshild J. Vågene
0f6fb0c10d
Update mjolnir_globe.md 2022-06-02 16:00:22 +02:00
Åshild J. Vågene
e871dc87f9
Update mjolnir_globe.md 2022-06-02 15:59:11 +02:00
Åshild J. Vågene
940077190b
Update mjolnir_globe.md 2022-06-02 15:38:40 +02:00
Åshild J. Vågene
2988e33576
Create mjolnir_globe.md 2022-06-02 15:38:07 +02:00
Nicolas Vannieuwkerke
867dcabd97 Fix type in VSC UGent 2022-05-20 10:36:07 +02:00
Nicolas Vannieuwkerke
8432e4d1dc typo 2022-05-20 09:49:42 +02:00
Nicolas Vannieuwkerke
fa39478a2d prettier 2022-05-20 09:49:04 +02:00
Nicolas Vannieuwkerke
c2b26a734d automated the internal cache dir location for singularity 2022-05-20 09:48:19 +02:00
nvnieuwk
b2f7538b33
Update docs/vsc_ugent.md
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-05-20 09:42:31 +02:00
nvnieuwk
a3583262c2
Update docs/vsc_ugent.md
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-05-20 09:41:02 +02:00
nvnieuwk
dba85e53fa
Update docs/vsc_ugent.md
Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
2022-05-20 09:40:55 +02:00
Nicolas Vannieuwkerke
a2d77df2ee added default scratch location to markdown file 2022-05-20 09:32:14 +02:00
Nicolas Vannieuwkerke
2f74c91145 prettier 2022-05-20 09:18:33 +02:00
Nicolas Vannieuwkerke
cc86e6b270 Added the VSC UGent profile 2022-05-20 09:12:18 +02:00
Sarah Guinchard
be9711731a
Merge pull request #375 from nf-core/ifb_core-config-update
Ifb core config update
2022-05-13 14:45:44 +02:00
sofstam
ca4cdcffee Fix typo 2022-05-12 15:07:30 +02:00
Sarah Guinchard
84457cc655 Update documentation 2022-05-12 11:01:36 +02:00
sofstam
c59149d64c Update docs for hasta config 2022-05-12 10:47:03 +02:00
James Fellows Yates
e1f780d976 Add taxprofiler for eVA 2022-05-12 07:54:17 +01:00
James Fellows Yates
4885b672b1 Prettier 2022-04-25 11:46:32 +02:00
Alex Rajewski
766eb450be
usage notes 2022-04-22 10:23:19 -07:00
James A. Fellows Yates
b0c9ac9be8
Update eva.md 2022-03-28 09:02:26 +02:00
b97pla
9a6cdfc21e removed process-specific requirements for sarek, request miarka high-mem node 2022-03-24 14:25:43 +01:00
b97pla
5466d927f1 added requirements for uppmax cluster miarka 2022-03-23 15:29:40 +01:00
Edmund Miller
6c37bf3b20
style: Run prettier 2022-03-21 19:23:28 -05:00
James A. Fellows Yates
962d86d604
Merge pull request #346 from sagc-bioinformatics/sahmri
Added SAHMRI profile
2022-03-18 13:01:36 +01:00
James A. Fellows Yates
a2e2e94333
Merge pull request #344 from njspix/vai
Add VAI configuration
2022-03-14 14:36:00 +01:00
Nathan Watson-Haigh
dba3fb4c1d Added SAHMRI HPC profile docs 2022-03-13 00:05:34 +10:30
Nathan Watson-Haigh
b638694bd0 Added SAHMRI HPC profile 2022-03-12 21:17:33 +10:30
Matiss
6c79c75eec
Merge pull request #290 from maxozo/master
added leicester profile
2022-03-11 09:21:09 +00:00
Spix
429c7b4fa8 initial commit 2022-03-07 15:01:46 -05:00
Alexander Peltzer
d0d86bfb2a
Merge pull request #339 from jfy133/rnaseq_mpcdf
Add RNASEQ specific config for MPCDF
2022-03-07 13:59:08 +01:00
James A. Fellows Yates
975fca6721
Apply suggestions from code review 2022-03-07 13:51:00 +01:00
Natalia Zajac
c2e0c9e6d4 Update on md file 2022-03-07 12:59:56 +01:00
Natalia Zajac
e07a0e548e Config Addition 2022-03-04 12:16:01 +01:00
James Fellows Yates
70318c3b2a Tweak eager settigs 2022-03-03 14:29:30 +01:00
James Fellows Yates
7112e74b73 Tweak settings based on latest batch specs 2022-03-03 13:43:40 +01:00
James Fellows Yates
e649bfbb2e Linting 2022-03-03 12:26:14 +01:00