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Author	SHA1	Message	Date
ameynert	b48136a62e	Added pipeline-specific config files	2021-03-18 12:55:03 +00:00
ameynert	af6a6b1060	Details on running on eddie ... Removed Conda support, Singularity by default. Added login and screen session on wild west node options.	2021-03-18 12:48:48 +00:00
ameyner2	bb388fb88b	Merge branch 'master' of github.com:ameynert/configs	2021-03-18 12:32:11 +00:00
ameyner2	059d353a1e	Removed Conda, added automount Singularity	2021-03-18 12:31:56 +00:00
ameynert	4ad6bb2bec	Singularity info	2021-03-17 14:50:40 +00:00
ameyner2	d4cd07c646	Typo in beforescript	2021-03-17 09:21:26 +00:00
ameyner2	cfe13fe6c1	Fixed typo & added singularity tmpdir	2021-03-15 15:42:30 +00:00
ameynert	bc961c7990	Merge pull request #1 from ggrimes/patch-1 ... changed # to // for comments	2021-03-04 19:48:45 +00:00
Graeme Grimes	babeccd020	changed # to // for comments	2021-03-04 16:45:21 +00:00
ameynert	4c0111f598	Eddie profile documentation initial commit	2021-03-04 14:46:58 +00:00
ameynert	6f09a233f0	Added singularity module	2021-03-04 14:46:23 +00:00
ameynert	3af2c6409f	Initial commit of eddie.config	2021-03-03 09:59:16 +00:00
ameynert	11e2083fb1	Added eddie profile to nfcore_custom.config list	2021-03-03 09:57:34 +00:00
Alexander Peltzer	bb8e82e9c7	Merge pull request #208 from maxibor/master ... Update shh config after CDAG departure	2021-02-17 10:41:13 +01:00
maxibor	286e18b80c	update shh config after CDAG departure	2021-02-17 10:22:05 +01:00
Harshil Patel	d457699de1	Merge pull request #207 from drpatelh/primers ... Update links to be consistent for viralrecon genomes raw URLs	2021-02-16 13:25:20 +00:00
drpatelh	01a4f8559e	Update links to be consistent	2021-02-16 13:17:16 +00:00
Harshil Patel	6ffaf922c5	Update genomes.config	2021-02-16 10:28:32 +00:00
Alexander Peltzer	a4630a926d	Merge pull request #206 from marchoeppner/ccga_dx_update ... Updating the CCGA DX profile to new storage system	2021-02-16 09:46:54 +01:00
Marc Hoeppner	1f2fce00aa	Updating the CCGA DX profile to new storage system	2021-02-16 09:02:16 +01:00
Harshil Patel	4de0855218	Update genomes.config	2021-02-15 18:48:03 +00:00
Harshil Patel	76750ad59b	Merge pull request #205 from drpatelh/primers ... Add ARTIC primer sets to genome config	2021-02-15 17:16:13 +00:00
drpatelh	9d500cf679	Reorder params	2021-02-15 17:02:26 +00:00
drpatelh	f283dfb2dc	Add ARTIC primer sets to genome config	2021-02-15 16:58:30 +00:00
James A. Fellows Yates	86566ddd3b	Merge pull request #204 from jfy133/master ... Add a 'big_data' profile for eager @ SHH	2021-02-04 15:07:52 +01:00
James A. Fellows Yates	e32f1e46ff	Update shh.config	2021-02-04 08:13:16 +01:00
James A. Fellows Yates	c515a401c7	Update shh.config	2021-02-04 08:06:35 +01:00
James A. Fellows Yates	82fe8a04be	Update shh.config	2021-02-04 08:02:33 +01:00
James A. Fellows Yates	e7ac0bae13	Update shh.config	2021-02-04 08:00:57 +01:00
James A. Fellows Yates	eb725f9ea3	Update shh.config	2021-02-03 20:13:09 +01:00
Alexander Peltzer	95791b04a4	Merge pull request #203 from oist/draftOISTconfig ... Institutional profile for the Okinawa Institute of Science and Technology (OIST)	2021-02-02 14:07:03 +01:00
Charles Plessy	1608b36dcf	Institutional profile for Okinawa Institute of Science and Technology	2021-02-02 17:40:10 +09:00
Thiseas C. Lamnidis	c33cedf4ed	Merge pull request #202 from nf-core/TCLamnidis-patch-1 ... Add debug profile	2021-01-26 15:20:56 +01:00
Thiseas C. Lamnidis	713a032a36	Add debug profile ... which deactivates cleanup of workdir after successful run	2021-01-26 15:08:21 +01:00
James A. Fellows Yates	5ba1b01c0c	Merge pull request #200 from nf-core/ceh-config ... Seg_globe config	2021-01-21 13:24:26 +01:00
James A. Fellows Yates	26d164ca74	Remove ceh profile for now	2021-01-21 13:15:08 +01:00
James A. Fellows Yates	c4604450d8	Update seg_globe.md	2021-01-21 13:04:12 +01:00
James A. Fellows Yates	7cffcf809b	Update main.yml	2021-01-21 12:50:14 +01:00
Åshild J. Vågene	765a2e0b7e	Update README.md	2021-01-21 11:55:00 +01:00
Åshild J. Vågene	8037b73ddd	Update nfcore_custom.config	2021-01-21 11:52:58 +01:00
Åshild J. Vågene	bcd137225e	Update and rename ceh.md to seg_globe.md	2021-01-21 11:46:46 +01:00
Åshild J. Vågene	594985f1ee	Update and rename ceh.config to seg_globe.config	2021-01-21 11:43:34 +01:00
Åshild J. Vågene	ef80452577	Update docs/ceh.md ... Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2021-01-21 11:16:46 +01:00
Åshild J. Vågene	8fa720b9cc	Update conf/ceh.config ... Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2021-01-21 11:15:06 +01:00
James A. Fellows Yates	2fd475c339	Fix some linting errors	2021-01-21 06:30:43 +01:00
James A. Fellows Yates	964cae4ac7	Add CEH to CI	2021-01-21 06:22:37 +01:00
Åshild J. Vågene	f8973f153a	Update ceh.config	2021-01-21 00:31:49 +01:00
Åshild J. Vågene	d108666950	Update ceh.md	2021-01-21 00:30:54 +01:00
Åshild J. Vågene	91594dffea	Update ceh.config	2021-01-21 00:29:43 +01:00
Åshild J. Vågene	22e6a60db1	Update README.md	2021-01-21 00:22:13 +01:00