ameyner2
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da8cf2f207
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Added pipeline-specific config files for rnaseq and sarek
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2021-03-24 10:46:26 +00:00 |
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ameynert
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b48136a62e
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Added pipeline-specific config files
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2021-03-18 12:55:03 +00:00 |
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ameynert
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af6a6b1060
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Details on running on eddie
Removed Conda support, Singularity by default. Added login and screen session on wild west node options.
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2021-03-18 12:48:48 +00:00 |
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ameyner2
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bb388fb88b
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Merge branch 'master' of github.com:ameynert/configs
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2021-03-18 12:32:11 +00:00 |
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ameyner2
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059d353a1e
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Removed Conda, added automount Singularity
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2021-03-18 12:31:56 +00:00 |
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ameynert
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4ad6bb2bec
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Singularity info
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2021-03-17 14:50:40 +00:00 |
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ameyner2
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d4cd07c646
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Typo in beforescript
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2021-03-17 09:21:26 +00:00 |
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ameyner2
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cfe13fe6c1
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Fixed typo & added singularity tmpdir
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2021-03-15 15:42:30 +00:00 |
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ameynert
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bc961c7990
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Merge pull request #1 from ggrimes/patch-1
changed # to // for comments
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2021-03-04 19:48:45 +00:00 |
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Graeme Grimes
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babeccd020
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changed # to // for comments
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2021-03-04 16:45:21 +00:00 |
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ameynert
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4c0111f598
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Eddie profile documentation initial commit
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2021-03-04 14:46:58 +00:00 |
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ameynert
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6f09a233f0
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Added singularity module
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2021-03-04 14:46:23 +00:00 |
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ameynert
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3af2c6409f
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Initial commit of eddie.config
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2021-03-03 09:59:16 +00:00 |
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ameynert
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11e2083fb1
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Added eddie profile to nfcore_custom.config list
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2021-03-03 09:57:34 +00:00 |
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Alexander Peltzer
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bb8e82e9c7
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Merge pull request #208 from maxibor/master
Update shh config after CDAG departure
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2021-02-17 10:41:13 +01:00 |
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maxibor
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286e18b80c
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update shh config after CDAG departure
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2021-02-17 10:22:05 +01:00 |
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Harshil Patel
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d457699de1
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Merge pull request #207 from drpatelh/primers
Update links to be consistent for viralrecon genomes raw URLs
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2021-02-16 13:25:20 +00:00 |
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drpatelh
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01a4f8559e
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Update links to be consistent
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2021-02-16 13:17:16 +00:00 |
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Harshil Patel
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6ffaf922c5
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Update genomes.config
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2021-02-16 10:28:32 +00:00 |
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Alexander Peltzer
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a4630a926d
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Merge pull request #206 from marchoeppner/ccga_dx_update
Updating the CCGA DX profile to new storage system
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2021-02-16 09:46:54 +01:00 |
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Marc Hoeppner
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1f2fce00aa
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Updating the CCGA DX profile to new storage system
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2021-02-16 09:02:16 +01:00 |
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Harshil Patel
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4de0855218
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Update genomes.config
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2021-02-15 18:48:03 +00:00 |
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Harshil Patel
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76750ad59b
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Merge pull request #205 from drpatelh/primers
Add ARTIC primer sets to genome config
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2021-02-15 17:16:13 +00:00 |
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drpatelh
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9d500cf679
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Reorder params
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2021-02-15 17:02:26 +00:00 |
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drpatelh
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f283dfb2dc
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Add ARTIC primer sets to genome config
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2021-02-15 16:58:30 +00:00 |
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James A. Fellows Yates
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86566ddd3b
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Merge pull request #204 from jfy133/master
Add a 'big_data' profile for eager @ SHH
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2021-02-04 15:07:52 +01:00 |
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James A. Fellows Yates
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e32f1e46ff
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Update shh.config
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2021-02-04 08:13:16 +01:00 |
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James A. Fellows Yates
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c515a401c7
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Update shh.config
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2021-02-04 08:06:35 +01:00 |
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James A. Fellows Yates
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82fe8a04be
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Update shh.config
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2021-02-04 08:02:33 +01:00 |
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James A. Fellows Yates
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e7ac0bae13
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Update shh.config
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2021-02-04 08:00:57 +01:00 |
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James A. Fellows Yates
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eb725f9ea3
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Update shh.config
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2021-02-03 20:13:09 +01:00 |
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Alexander Peltzer
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95791b04a4
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Merge pull request #203 from oist/draftOISTconfig
Institutional profile for the Okinawa Institute of Science and Technology (OIST)
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2021-02-02 14:07:03 +01:00 |
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Charles Plessy
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1608b36dcf
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Institutional profile for Okinawa Institute of Science and Technology
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2021-02-02 17:40:10 +09:00 |
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Thiseas C. Lamnidis
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c33cedf4ed
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Merge pull request #202 from nf-core/TCLamnidis-patch-1
Add debug profile
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2021-01-26 15:20:56 +01:00 |
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Thiseas C. Lamnidis
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713a032a36
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Add debug profile
which deactivates cleanup of workdir after successful run
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2021-01-26 15:08:21 +01:00 |
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James A. Fellows Yates
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5ba1b01c0c
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Merge pull request #200 from nf-core/ceh-config
Seg_globe config
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2021-01-21 13:24:26 +01:00 |
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James A. Fellows Yates
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26d164ca74
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Remove ceh profile for now
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2021-01-21 13:15:08 +01:00 |
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James A. Fellows Yates
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c4604450d8
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Update seg_globe.md
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2021-01-21 13:04:12 +01:00 |
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James A. Fellows Yates
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7cffcf809b
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Update main.yml
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2021-01-21 12:50:14 +01:00 |
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Åshild J. Vågene
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765a2e0b7e
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Update README.md
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2021-01-21 11:55:00 +01:00 |
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Åshild J. Vågene
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8037b73ddd
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Update nfcore_custom.config
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2021-01-21 11:52:58 +01:00 |
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Åshild J. Vågene
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bcd137225e
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Update and rename ceh.md to seg_globe.md
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2021-01-21 11:46:46 +01:00 |
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Åshild J. Vågene
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594985f1ee
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Update and rename ceh.config to seg_globe.config
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2021-01-21 11:43:34 +01:00 |
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Åshild J. Vågene
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ef80452577
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Update docs/ceh.md
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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2021-01-21 11:16:46 +01:00 |
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Åshild J. Vågene
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8fa720b9cc
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Update conf/ceh.config
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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2021-01-21 11:15:06 +01:00 |
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James A. Fellows Yates
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2fd475c339
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Fix some linting errors
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2021-01-21 06:30:43 +01:00 |
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James A. Fellows Yates
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964cae4ac7
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Add CEH to CI
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2021-01-21 06:22:37 +01:00 |
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Åshild J. Vågene
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f8973f153a
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Update ceh.config
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2021-01-21 00:31:49 +01:00 |
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Åshild J. Vågene
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d108666950
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Update ceh.md
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2021-01-21 00:30:54 +01:00 |
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Åshild J. Vågene
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91594dffea
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Update ceh.config
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2021-01-21 00:29:43 +01:00 |
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