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Author	SHA1	Message	Date
Gwenna Breton	2398110ea5	Added info on dowloading pipelines	2022-06-30 14:24:17 +02:00
Gwenna Breton	22f73b06f9	Updated info about the different profiles	2022-06-30 12:00:05 +02:00
Gwenna Breton	77dba3256a	Add profile name to test scope	2022-06-30 11:53:02 +02:00
Gwenna Breton	abccece8a3	Added medair config file to the list	2022-06-30 11:49:47 +02:00
Gwenna Breton	77017e877a	Added medair configuration docs to the list	2022-06-30 11:48:34 +02:00
Gwenna Breton	f718025e79	Added doc file for medair	2022-06-30 11:43:04 +02:00
Gwenna Breton	bb35d8e5d1	Added conf file for medair	2022-06-30 11:42:36 +02:00
Maxime U. Garcia	23669d2df6	Merge pull request #393 from Sage-Bionetworks-Workflows/bgrande/sage-sarek-config ... Include `check_max()` definition for Sage configuration	2022-06-23 21:47:17 +02:00
Bruno Grande	6f0d9e6c43	Complete check_max() move to global config	2022-06-23 10:10:28 -07:00
Bruno Grande	a19d79f6ff	Move check_max() to global config	2022-06-23 09:44:16 -07:00
Bruno Grande	1c7230cb08	Add Sage-specific Sarek config	2022-06-23 09:15:42 -07:00
Phil Ewels	1730751d97	Merge pull request #389 from Sage-Bionetworks-Workflows/bgrande/sage-config ... [WIP] Add custom configuration for Sage Bionetworks	2022-06-23 11:34:40 +02:00
Bruno Grande	37121faf4a	Fix typoe with label name	2022-06-22 14:37:43 -07:00
Bruno Grande	ecd898584d	Handle Sarek-specific max labels	2022-06-22 13:54:13 -07:00
Bruno Grande	c7093dee13	Reduce max_memory to fit on an instance	2022-06-16 12:37:32 -07:00
Bruno Grande	2898736cbe	Add Sage Bionetworks nf-core configuration	2022-06-08 14:16:52 -07:00
Maxime U. Garcia	b50af6bf7e	Merge pull request #388 from nvnieuwk/singularity-fix-for-vsc_ugent ... Singularity fix for vsc ugent	2022-06-08 16:34:38 +02:00
Nicolas Vannieuwkerke	b6d38859f0	fix for singularity cache for vsc_ugent profile	2022-06-08 16:28:28 +02:00
Nicolas Vannieuwkerke	98eacf030d	fix for singularity cache for vsc_ugent profile	2022-06-08 16:27:48 +02:00
Maxime U. Garcia	5fdc8b7b1b	Merge pull request #381 from maxulysse/master ... add fix linting from comment	2022-06-07 11:54:19 +02:00
Maxime U. Garcia	b0f1746abf	Merge branch 'master' into master	2022-06-07 11:42:50 +02:00
James A. Fellows Yates	515cbf0a77	Merge pull request #385 from nvnieuwk/fix-for-failing-tests-vsc-ugent-profile ... Fix for failing tests for vsc_ugent	2022-06-07 11:41:00 +02:00
Nicolas Vannieuwkerke	44e25830e4	update for vsc_ugent	2022-06-07 11:33:22 +02:00
Maxime U. Garcia	4587fc4215	Merge pull request #379 from nf-core/config_ucph-mjolnir_ash ... custom config mjolnir_globe	2022-06-03 17:28:57 +02:00
Åshild J. Vågene	ed526530d2	Rename mjolnir_globe to mjolnir_globe.config	2022-06-03 17:15:12 +02:00
Åshild J. Vågene	34feaa8b6b	prettier output	2022-06-03 17:08:15 +02:00
Åshild J. Vågene	2d82218318	typo	2022-06-03 16:42:08 +02:00
MaxUlysse	5a04f62681	add fix linting from comment	2022-06-03 15:57:24 +02:00
Åshild J. Vågene	144ca851c1	Update mjolnir_globe.md	2022-06-03 15:36:19 +02:00
Åshild J. Vågene	22ed36a73d	cacheDir update	2022-06-03 15:33:58 +02:00
Phil Ewels	b51059a3ae	Merge branch 'master' into config_ucph-mjolnir_ash	2022-06-03 13:21:36 +02:00
James A. Fellows Yates	7353fb257d	Merge pull request #380 from jfy133/taxprofiler ... Add MAG @ EVA profile	2022-06-03 12:54:47 +02:00
James A. Fellows Yates	24e165c52d	Update pipeline/mag.config	2022-06-03 12:51:47 +02:00
James A. Fellows Yates	97d57539e3	Apply suggestions from code review ... Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>	2022-06-03 12:51:20 +02:00
James Fellows Yates	5a67eba04c	Add MAG @ EVA profile	2022-06-03 12:41:08 +02:00
Åshild J. Vågene	1d23ba9264	change name of tmp dir to .tmp_nfcore	2022-06-02 16:40:29 +02:00
Åshild J. Vågene	2b67d3aaab	Update main.yml	2022-06-02 16:30:35 +02:00
Åshild J. Vågene	62dfda8103	add mjolnir_globe md	2022-06-02 16:07:47 +02:00
Åshild J. Vågene	7a63e0a2ec	mjolnir_globe config added	2022-06-02 16:05:28 +02:00
Åshild J. Vågene	0f6fb0c10d	Update mjolnir_globe.md	2022-06-02 16:00:22 +02:00
Åshild J. Vågene	e871dc87f9	Update mjolnir_globe.md	2022-06-02 15:59:11 +02:00
Åshild J. Vågene	940077190b	Update mjolnir_globe.md	2022-06-02 15:38:40 +02:00
Åshild J. Vågene	2988e33576	Create mjolnir_globe.md	2022-06-02 15:38:07 +02:00
Åshild J. Vågene	9b9a6f0188	Update and rename holo_globe to mjolnir_globe	2022-06-02 15:09:52 +02:00
Åshild J. Vågene	6d9cc91c5f	Update holo_globe	2022-06-02 15:03:47 +02:00
Åshild J. Vågene	64fe4677b1	Update holo_globe	2022-05-31 15:26:23 +02:00
Åshild J. Vågene	0b51552e88	Update holo_globe	2022-05-31 15:23:43 +02:00
Emil Bertilsson	80e2a50a2f	Merge pull request #378 from raysloks/feat/hasta_java_memory_fix ... Feat/hasta java memory fix	2022-05-30 14:40:52 +02:00
Emil	8453f6b41a	Moves qualimap arg to pipeline-specific config	2022-05-30 12:58:12 +02:00
Emil	29fa08c434	Adds _JAVA_OPTIONS to singularity whitelist	2022-05-30 11:07:24 +02:00