millironx/nf-configs
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  • 4538e8aa36
         Update medair.config Gwenna Breton 2022-07-07 13:41:42 +0200
  • 746db14d47
         Update medair.md Gwenna Breton 2022-07-07 11:42:46 +0200
  • d19d6c0ae0 update wording qlr900 2022-07-06 16:19:16 +0200
  • d2b6b07de8 remove comments for mnaseseq qlr900 2022-07-06 14:18:31 +0200
  • b6e2d03a02 Added Singularity cache dir Gwennid 2022-07-06 13:59:35 +0200
  • 4f98876429 add export to NXF_SINGULARITY_CACHEDIR qlr900 2022-07-06 13:35:10 +0200
  • 6939c6f003 lower queueSize to 5 qlr900 2022-07-06 13:34:18 +0200
  • f45b8645f6 update wording qlr900 2022-07-06 13:05:13 +0200
  • 8a781b6bb2 modify alternative module load qlr900 2022-07-06 12:54:07 +0200
  • 7ac08a1015 add alternative module load qlr900 2022-07-06 12:42:14 +0200
  • 49e756d1bc fix typos qlr900 2022-07-06 12:39:55 +0200
  • 96fd2bf217 Fixed formatting Gwennid 2022-07-06 11:42:05 +0200
  • 1d13dd9fbc
         Changed where cgg-it is mentioned Gwenna Breton 2022-07-06 11:24:03 +0200
  • 235097e58e
         Addressed review comments Gwenna Breton 2022-07-06 11:20:59 +0200
  • 1d7a34b11f
         Removed comment about internal doc Gwenna Breton 2022-07-06 11:17:58 +0200
  • b202ad70ac
         Removed mention of specific module versions Gwenna Breton 2022-07-06 11:16:38 +0200
  • 56026c5ac4 remove beforeScript qlr900 2022-07-06 09:52:51 +0200
  • 7d59eabd91 simplify guideline qlr900 2022-07-06 09:52:06 +0200
  • 941a34406a update ku_sund_dangpu.md qlr900 2022-07-05 12:06:19 +0200
  • 8ba35f721c add ku_sund_dangpu.md qlr900 2022-07-05 12:05:10 +0200
  • 65d7080921 add conf/ku_sund_dangpu.config qlr900 2022-07-05 11:17:49 +0200
  • 08435ca300
         Merge pull request #382 from jfy133/eva-java-correction James A. Fellows Yates 2022-07-04 13:42:13 +0200
  • a141ff626b
         Merge branch 'master' into eva-java-correction James A. Fellows Yates 2022-07-04 13:35:50 +0200
  • b3a6e199ca
         Merge branch 'nf-core:master' into medair Gwenna Breton 2022-07-01 17:02:56 +0200
  • 49e779e337
         Merge pull request #394 from nvnieuwk/vsc-ugent-fix Maxime U. Garcia 2022-07-01 16:26:41 +0200
  • 8a74c517d4 Merge branch 'vsc-ugent-fix' of github.com:nvnieuwk/configs into vsc-ugent-fix Nicolas Vannieuwkerke 2022-07-01 16:16:22 +0200
  • 1e34595280 removed queue size limit Nicolas Vannieuwkerke 2022-07-01 16:16:18 +0200
  • 5ff845cde7
         Merge branch 'master' into vsc-ugent-fix nvnieuwk 2022-07-01 16:10:45 +0200
  • fa949a069e added queuesize Nicolas Vannieuwkerke 2022-07-01 16:01:19 +0200
  • abfa3f47f4 lowered the job submit rate of vsc_ugent Nicolas Vannieuwkerke 2022-07-01 15:55:44 +0200
  • 84174043e4
         Added details for nf-core pipelines download Gwenna Breton 2022-06-30 16:41:50 +0200
  • 2398110ea5
         Added info on dowloading pipelines Gwenna Breton 2022-06-30 14:24:17 +0200
  • 22f73b06f9 Updated info about the different profiles Gwenna Breton 2022-06-30 12:00:05 +0200
  • 77dba3256a Add profile name to test scope Gwenna Breton 2022-06-30 11:53:02 +0200
  • abccece8a3 Added medair config file to the list Gwenna Breton 2022-06-30 11:49:47 +0200
  • 77017e877a Added medair configuration docs to the list Gwenna Breton 2022-06-30 11:48:34 +0200
  • f718025e79 Added doc file for medair Gwenna Breton 2022-06-30 11:43:04 +0200
  • bb35d8e5d1 Added conf file for medair Gwenna Breton 2022-06-30 11:42:36 +0200
  • 23669d2df6
         Merge pull request #393 from Sage-Bionetworks-Workflows/bgrande/sage-sarek-config Maxime U. Garcia 2022-06-23 21:47:17 +0200
  • 6f0d9e6c43 Complete check_max() move to global config Bruno Grande 2022-06-23 10:10:28 -0700
  • a19d79f6ff Move check_max() to global config Bruno Grande 2022-06-23 09:44:16 -0700
  • 1c7230cb08 Add Sage-specific Sarek config Bruno Grande 2022-06-23 09:15:42 -0700
  • 1730751d97
         Merge pull request #389 from Sage-Bionetworks-Workflows/bgrande/sage-config Phil Ewels 2022-06-23 11:34:40 +0200
  • 37121faf4a Fix typoe with label name Bruno Grande 2022-06-22 14:37:43 -0700
  • ecd898584d Handle Sarek-specific max labels Bruno Grande 2022-06-22 13:54:13 -0700
  • c7093dee13 Reduce max_memory to fit on an instance Bruno Grande 2022-06-16 12:37:32 -0700
  • 51d057564f
         Fix python related seg faults mag@eva James A. Fellows Yates 2022-06-15 15:40:42 +0200
  • ba8bffbdfd Use env scope instead of beforescript for mag@eva James Fellows Yates 2022-06-15 15:39:36 +0200
  • d12d98fb2e Merge branches 'master' and 'eva-java-correction' of github.com:jfy133/nf-core-configs into master James Fellows Yates 2022-06-15 15:38:35 +0200
  • acabcbd9e8 Use _JAVA_OPTIONS instead James Fellows Yates 2022-06-15 15:27:40 +0200
  • 76b0d1dd85 Merge branch 'eva-java-correction' of github.com:jfy133/nf-core-configs into eva-java-correction James Fellows Yates 2022-06-15 15:22:25 +0200
  • 58dd9d49c7 Move beforeScript exports to env scope James Fellows Yates 2022-06-15 15:21:20 +0200
  • c8c795595a
         Merge branch 'nf-core:master' into feat/hasta_java_memory_fix Emil Bertilsson 2022-06-09 15:10:46 +0200
  • 72e995f326 Adds generic fix for java memory issue on slurm Emil Bertilsson 2022-06-09 10:28:20 +0200
  • 2898736cbe Add Sage Bionetworks nf-core configuration Bruno Grande 2022-06-08 14:16:52 -0700
  • b50af6bf7e
         Merge pull request #388 from nvnieuwk/singularity-fix-for-vsc_ugent Maxime U. Garcia 2022-06-08 16:34:38 +0200
  • b6d38859f0 fix for singularity cache for vsc_ugent profile Nicolas Vannieuwkerke 2022-06-08 16:28:28 +0200
  • 98eacf030d fix for singularity cache for vsc_ugent profile Nicolas Vannieuwkerke 2022-06-08 16:27:48 +0200
  • d8c2775976
         Update google.config to fix custom VM memory error Andrew Frank 2022-06-07 09:41:41 -0400
  • 28c3cca5e7 [automated] Fix linting with Prettier nf-core-bot 2022-06-07 10:03:04 +0000
  • c08cb5e97e
         Merge branch 'master' into varskip_designs Maxime U. Garcia 2022-06-07 11:58:49 +0200
  • 3ab5261bdd
         Merge branch 'master' into kevbrick-patch-1 Maxime U. Garcia 2022-06-07 11:58:36 +0200
  • 3eca377514
         Merge branch 'master' into gis-branch Maxime U. Garcia 2022-06-07 11:58:20 +0200
  • 844d250011
         Merge branch 'master' into eva-java-correction Maxime U. Garcia 2022-06-07 11:57:05 +0200
  • 5fdc8b7b1b
         Merge pull request #381 from maxulysse/master Maxime U. Garcia 2022-06-07 11:54:19 +0200
  • b0f1746abf
         Merge branch 'master' into master Maxime U. Garcia 2022-06-07 11:42:50 +0200
  • 515cbf0a77
         Merge pull request #385 from nvnieuwk/fix-for-failing-tests-vsc-ugent-profile James A. Fellows Yates 2022-06-07 11:41:00 +0200
  • 44e25830e4 update for vsc_ugent Nicolas Vannieuwkerke 2022-06-07 11:33:22 +0200
  • 46fba9c597
         Update eva.config James A. Fellows Yates 2022-06-03 21:10:48 +0200
  • 05cc8a08f1
         Update eva.config James A. Fellows Yates 2022-06-03 21:08:19 +0200
  • 4587fc4215
         Merge pull request #379 from nf-core/config_ucph-mjolnir_ash Maxime U. Garcia 2022-06-03 17:28:57 +0200
  • ed526530d2
         Rename mjolnir_globe to mjolnir_globe.config Åshild J. Vågene 2022-06-03 17:15:12 +0200
  • 34feaa8b6b
         prettier output Åshild J. Vågene 2022-06-03 17:08:15 +0200
  • 2d82218318
         typo Åshild J. Vågene 2022-06-03 16:42:08 +0200
  • 5a04f62681 add fix linting from comment MaxUlysse 2022-06-03 15:57:24 +0200
  • 144ca851c1
         Update mjolnir_globe.md Åshild J. Vågene 2022-06-03 15:36:19 +0200
  • 22ed36a73d
         cacheDir update Åshild J. Vågene 2022-06-03 15:33:58 +0200
  • 9ef52af084 Increase overhead James Fellows Yates 2022-06-03 14:24:27 +0200
  • c40ebb9acf Add overhead for get_software_versions James Fellows Yates 2022-06-03 14:21:41 +0200
  • df0429ce9d Replace oracle specific _JAVA_OPTIONS to portable JAVA_TOOLS_OPTIONS James Fellows Yates 2022-06-03 14:20:39 +0200
  • b51059a3ae
         Merge branch 'master' into config_ucph-mjolnir_ash Phil Ewels 2022-06-03 13:21:36 +0200
  • b38a0077c2
         Merge branch 'master' into gis-branch Phil Ewels 2022-06-03 13:20:45 +0200
  • 3b338828d5
         Merge branch 'master' into kevbrick-patch-1 Phil Ewels 2022-06-03 13:20:09 +0200
  • 7353fb257d
         Merge pull request #380 from jfy133/taxprofiler James A. Fellows Yates 2022-06-03 12:54:47 +0200
  • 24e165c52d
         Update pipeline/mag.config James A. Fellows Yates 2022-06-03 12:51:47 +0200
  • 97d57539e3
         Apply suggestions from code review James A. Fellows Yates 2022-06-03 12:51:20 +0200
  • 5a67eba04c Add MAG @ EVA profile James Fellows Yates 2022-06-03 12:41:08 +0200
  • 1d23ba9264
         change name of tmp dir to .tmp_nfcore Åshild J. Vågene 2022-06-02 16:40:29 +0200
  • 2b67d3aaab
         Update main.yml Åshild J. Vågene 2022-06-02 16:30:35 +0200
  • 62dfda8103
         add mjolnir_globe md Åshild J. Vågene 2022-06-02 16:07:47 +0200
  • 7a63e0a2ec
         mjolnir_globe config added Åshild J. Vågene 2022-06-02 16:05:28 +0200
  • 0f6fb0c10d
         Update mjolnir_globe.md Åshild J. Vågene 2022-06-02 16:00:22 +0200
  • e871dc87f9
         Update mjolnir_globe.md Åshild J. Vågene 2022-06-02 15:59:11 +0200
  • 940077190b
         Update mjolnir_globe.md Åshild J. Vågene 2022-06-02 15:38:40 +0200
  • 2988e33576
         Create mjolnir_globe.md Åshild J. Vågene 2022-06-02 15:38:07 +0200
  • 9b9a6f0188
         Update and rename holo_globe to mjolnir_globe Åshild J. Vågene 2022-06-02 15:09:52 +0200
  • 6d9cc91c5f
         Update holo_globe Åshild J. Vågene 2022-06-02 15:03:47 +0200
  • 64fe4677b1
         Update holo_globe Åshild J. Vågene 2022-05-31 15:26:23 +0200
  • 0b51552e88
         Update holo_globe Åshild J. Vågene 2022-05-31 15:23:43 +0200
  • 80e2a50a2f
         Merge pull request #378 from raysloks/feat/hasta_java_memory_fix Emil Bertilsson 2022-05-30 14:40:52 +0200